RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 COL26A1Q96A83 441 aa12.71□□□□□ -0.37
AC010542.3-202ENST00000561728 MXD3Q9BW11 206 aa12.71□□□□□ -0.37
AC010542.3-202ENST00000561728 CSADQ9Y600 493 aa12.71□□□□□ -0.37
AC010542.3-202ENST00000561728 LRRC26Q2I0M4 334 aa12.7□□□□□ -0.38
AC010542.3-202ENST00000561728 AAK1Q2M2I8 961 aa12.7□□□□□ -0.38
AC010542.3-202ENST00000561728 MTMR14Q8NCE2 650 aa12.7□□□□□ -0.38
AC010542.3-202ENST00000561728 PODXL2Q9NZ53 605 aa12.7□□□□□ -0.38
AC010542.3-202ENST00000561728 ZNF804BA4D1E1 1349 aa12.69□□□□□ -0.38
AC010542.3-202ENST00000561728 PRR33A8MZF0 331 aa12.69□□□□□ -0.38
AC010542.3-202ENST00000561728 SNAPC2Q13487 334 aa12.69□□□□□ -0.38
AC010542.3-202ENST00000561728 IRF5Q13568 498 aa12.69□□□□□ -0.38
AC010542.3-202ENST00000561728 DACT2Q5SW24 774 aa12.69□□□□□ -0.38
AC010542.3-202ENST00000561728 GAS2L2Q8NHY3 880 aa12.69□□□□□ -0.38
AC010542.3-202ENST00000561728 FBXL18Q96ME1 805 aa12.69□□□□□ -0.38
AC010542.3-202ENST00000561728 UIMC1Q96RL1 719 aa12.69□□□□□ -0.38
AC010542.3-202ENST00000561728 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
AC010542.3-202ENST00000561728 KCNH6Q9H252 994 aa12.69□□□□□ -0.38
AC010542.3-202ENST00000561728 CXXC1Q9P0U4 656 aaPredicted RBP12.69□□□□□ -0.38
AC010542.3-202ENST00000561728 RRP7AQ9Y3A4 280 aaKnown RBP12.69□□□□□ -0.38
AC010542.3-202ENST00000561728 MYL6BP14649 208 aa12.68□□□□□ -0.38
AC010542.3-202ENST00000561728 VGLL4Q14135 290 aa12.68□□□□□ -0.38
AC010542.3-202ENST00000561728 AMER1Q5JTC6 1135 aaPredicted RBP12.68□□□□□ -0.38
AC010542.3-202ENST00000561728 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.68□□□□□ -0.38
AC010542.3-202ENST00000561728 ZBED3Q96IU2 234 aaPredicted RBP12.68□□□□□ -0.38
AC010542.3-202ENST00000561728 ZNF576Q9H609 170 aa12.68□□□□□ -0.38
AC010542.3-202ENST00000561728 OGDHLQ9ULD0 1010 aa12.68□□□□□ -0.38
AC010542.3-202ENST00000561728 MYO9BQ13459 2157 aa12.68□□□□□ -0.38
AC010542.3-202ENST00000561728 CHD8Q9HCK8 2581 aa12.67□□□□□ -0.38
AC010542.3-202ENST00000561728 MYO1BO43795 1136 aa12.67□□□□□ -0.38
AC010542.3-202ENST00000561728 MAP3K9P80192 1104 aa12.67□□□□□ -0.38
AC010542.3-202ENST00000561728 DLGAP5Q15398 846 aa12.67□□□□□ -0.38
AC010542.3-202ENST00000561728 KIAA0825Q8IV33 1275 aa12.67□□□□□ -0.38
AC010542.3-202ENST00000561728 VEZTQ9HBM0 779 aa12.67□□□□□ -0.38
AC010542.3-202ENST00000561728 HMX1Q9NP08 348 aaPredicted RBP12.67□□□□□ -0.38
AC010542.3-202ENST00000561728 TRMT112Q9UI30 125 aaKnown RBP12.67□□□□□ -0.38
AC010542.3-202ENST00000561728 CEMIPQ8WUJ3 1361 aa12.67□□□□□ -0.38
AC010542.3-202ENST00000561728 SPTBN4Q9H254 2564 aa12.67□□□□□ -0.38
AC010542.3-202ENST00000561728 SH3TC1Q8TE82 1336 aa12.66□□□□□ -0.38
AC010542.3-202ENST00000561728 WDFY4Q6ZS81 3184 aa12.66□□□□□ -0.38
AC010542.3-202ENST00000561728 MGAMO43451 1857 aa12.66□□□□□ -0.38
AC010542.3-202ENST00000561728 PDHXO00330 501 aa12.66□□□□□ -0.38
AC010542.3-202ENST00000561728 KRT37O76014 449 aa12.66□□□□□ -0.38
AC010542.3-202ENST00000561728 U2AF1L5P0DN76 240 aaPredicted RBP12.66□□□□□ -0.38
AC010542.3-202ENST00000561728 U2AF1Q01081 240 aaKnown RBP eCLIP12.66□□□□□ -0.38
AC010542.3-202ENST00000561728 STRIP1Q5VSL9 837 aa12.66□□□□□ -0.38
AC010542.3-202ENST00000561728 XIRP2A4UGR9 3374 aa12.66□□□□□ -0.38
AC010542.3-202ENST00000561728 CLRN2A0PK11 232 aa12.65□□□□□ -0.38
AC010542.3-202ENST00000561728 SPDYE5A6NIY4 337 aa12.65□□□□□ -0.38
AC010542.3-202ENST00000561728 TNPO2O14787 897 aaKnown RBP12.65□□□□□ -0.38
AC010542.3-202ENST00000561728 DNAJB2P25686 324 aa12.65□□□□□ -0.38
AC010542.3-202ENST00000561728 KCNQ1P51787 676 aa12.65□□□□□ -0.38
AC010542.3-202ENST00000561728 USP34Q70CQ2 3546 aa12.65□□□□□ -0.39
AC010542.3-202ENST00000561728 HMGCRP04035 888 aa12.64□□□□□ -0.39
AC010542.3-202ENST00000561728 COL6A1P12109 1028 aa12.64□□□□□ -0.39
AC010542.3-202ENST00000561728 RPS8P62241 208 aaKnown RBP12.64□□□□□ -0.39
AC010542.3-202ENST00000561728 RASA3Q14644 834 aa12.64□□□□□ -0.39
AC010542.3-202ENST00000561728 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
AC010542.3-202ENST00000561728 ANKRD23Q86SG2 305 aa12.64□□□□□ -0.39
AC010542.3-202ENST00000561728 PARK7Q99497 189 aaKnown RBP12.64□□□□□ -0.39
AC010542.3-202ENST00000561728 PI4K2BG5E9Z4 385 aa12.63□□□□□ -0.39
AC010542.3-202ENST00000561728 IRF6O14896 467 aa12.63□□□□□ -0.39
AC010542.3-202ENST00000561728 BCRP11274 1271 aa12.63□□□□□ -0.39
AC010542.3-202ENST00000561728 IGFBP4P22692 258 aa12.63□□□□□ -0.39
AC010542.3-202ENST00000561728 TFF2Q03403 129 aa12.63□□□□□ -0.39
AC010542.3-202ENST00000561728 CSPP1Q1MSJ5 1256 aa12.63□□□□□ -0.39
AC010542.3-202ENST00000561728 ERO1BQ86YB8 467 aa12.63□□□□□ -0.39
AC010542.3-202ENST00000561728 RNPC3Q96LT9 517 aaKnown RBP12.63□□□□□ -0.39
AC010542.3-202ENST00000561728 DNAH12Q6ZR08 3092 aa12.63□□□□□ -0.39
AC010542.3-202ENST00000561728 COL3A1P02461 1466 aaPredicted RBP12.63□□□□□ -0.39
AC010542.3-202ENST00000561728 C5orf42Q9H799 3197 aa12.62□□□□□ -0.39
AC010542.3-202ENST00000561728 ITGB8P26012 769 aa12.62□□□□□ -0.39
AC010542.3-202ENST00000561728 ERMP1Q7Z2K6 904 aa12.62□□□□□ -0.39
AC010542.3-202ENST00000561728 NLRP10Q86W26 655 aa12.62□□□□□ -0.39
AC010542.3-202ENST00000561728 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.62□□□□□ -0.39
AC010542.3-202ENST00000561728 KHSRPQ92945 711 aaKnown RBP eCLIP12.62□□□□□ -0.39
AC010542.3-202ENST00000561728 TIFAQ96CG3 184 aa12.62□□□□□ -0.39
AC010542.3-202ENST00000561728 PRDM12Q9H4Q4 367 aa12.62□□□□□ -0.39
AC010542.3-202ENST00000561728 KCNH4Q9UQ05 1017 aa12.62□□□□□ -0.39
AC010542.3-202ENST00000561728 COL4A1P02462 1669 aa12.61□□□□□ -0.39
AC010542.3-202ENST00000561728 PPIL2Q13356 520 aa12.61□□□□□ -0.39
AC010542.3-202ENST00000561728 SF3B3Q15393 1217 aaKnown RBP12.61□□□□□ -0.39
AC010542.3-202ENST00000561728 HSP90AB3PQ58FF7 597 aa12.61□□□□□ -0.39
AC010542.3-202ENST00000561728 COA7Q96BR5 231 aa12.61□□□□□ -0.39
AC010542.3-202ENST00000561728 LTBP2Q14767 1821 aa12.6□□□□□ -0.39
AC010542.3-202ENST00000561728 EPG5Q9HCE0 2579 aa12.6□□□□□ -0.39
AC010542.3-202ENST00000561728 SPDYE2BA6NHP3 402 aa12.6□□□□□ -0.39
AC010542.3-202ENST00000561728 SPDYE6P0CI01 402 aa12.6□□□□□ -0.39
AC010542.3-202ENST00000561728 ATP2B4P23634 1241 aa12.6□□□□□ -0.39
AC010542.3-202ENST00000561728 TNFAIP1Q13829 316 aa12.6□□□□□ -0.39
AC010542.3-202ENST00000561728 SPDYE2Q495Y8 402 aa12.6□□□□□ -0.39
AC010542.3-202ENST00000561728 MORC1Q86VD1 984 aa12.6□□□□□ -0.39
AC010542.3-202ENST00000561728 ECM29Q5VYK3 1845 aa12.6□□□□□ -0.39
AC010542.3-202ENST00000561728 XDHP47989 1333 aa12.6□□□□□ -0.39
AC010542.3-202ENST00000561728 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.59□□□□□ -0.39
AC010542.3-202ENST00000561728 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.59□□□□□ -0.39
AC010542.3-202ENST00000561728 TTLL5Q6EMB2 1281 aa12.59□□□□□ -0.39
AC010542.3-202ENST00000561728 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.59□□□□□ -0.39
AC010542.3-202ENST00000561728 BADQ92934 168 aa12.59□□□□□ -0.39
AC010542.3-202ENST00000561728 PHOX2BQ99453 314 aa12.59□□□□□ -0.39
AC010542.3-202ENST00000561728 SNCAIPQ9Y6H5 919 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms