RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 PDE3BQ13370 1112 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 GNL2Q13823 731 aaKnown RBP8.3□□□□□ -1.08
USP8-210ENST00000560379 TEAD4Q15561 434 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 CCDC144BQ3MJ40 725 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 TBCELQ5QJ74 424 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 ZNF662Q6ZS27 426 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 NOL8Q76FK4 1167 aaKnown RBP8.3□□□□□ -1.08
USP8-210ENST00000560379 L3MBTL2Q969R5 705 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 TSPAN10Q9H1Z9 355 aaPredicted RBP8.3□□□□□ -1.08
USP8-210ENST00000560379 STIM2Q9P246 746 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.3□□□□□ -1.08
USP8-210ENST00000560379 TMA7Q9Y2S6 64 aaKnown RBP8.3□□□□□ -1.08
USP8-210ENST00000560379 GJA3Q9Y6H8 435 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 RIMS1Q86UR5 1692 aaKnown RBP8.3□□□□□ -1.08
USP8-210ENST00000560379 PRDM15P57071 1507 aaPredicted RBP8.29□□□□□ -1.08
USP8-210ENST00000560379 SIN3BO75182 1162 aa8.29□□□□□ -1.08
USP8-210ENST00000560379 HNRNPMP52272 730 aaKnown RBP eCLIP8.29□□□□□ -1.08
USP8-210ENST00000560379 ALKBH8Q96BT7 664 aaKnown RBP8.29□□□□□ -1.08
USP8-210ENST00000560379 ARMC5Q96C12 935 aa8.29□□□□□ -1.08
USP8-210ENST00000560379 CNTLNQ9NXG0 1405 aa8.29□□□□□ -1.08
USP8-210ENST00000560379 GCC2Q8IWJ2 1684 aa8.28□□□□□ -1.08
USP8-210ENST00000560379 ROCK1Q13464 1354 aa8.28□□□□□ -1.08
USP8-210ENST00000560379 LOC102724159A0A0B4J2E5 919 aa8.28□□□□□ -1.08
USP8-210ENST00000560379 M0R082 166 aa8.28□□□□□ -1.08
USP8-210ENST00000560379 TNFRSF10BO14763 440 aa8.28□□□□□ -1.08
USP8-210ENST00000560379 DNAJA1P31689 397 aaKnown RBP8.28□□□□□ -1.08
USP8-210ENST00000560379 NOS2P35228 1153 aa8.28□□□□□ -1.08
USP8-210ENST00000560379 PWP2Q15269 919 aaKnown RBP8.28□□□□□ -1.08
USP8-210ENST00000560379 COX20Q5RI15 118 aa8.28□□□□□ -1.08
USP8-210ENST00000560379 ZNF417Q8TAU3 575 aa8.28□□□□□ -1.08
USP8-210ENST00000560379 TNFRSF25Q93038 417 aa8.28□□□□□ -1.08
USP8-210ENST00000560379 ZNF587Q96SQ5 575 aaPredicted RBP8.28□□□□□ -1.08
USP8-210ENST00000560379 GMLQ99445 158 aa8.28□□□□□ -1.08
USP8-210ENST00000560379 NIF3L1Q9GZT8 377 aa8.28□□□□□ -1.08
USP8-210ENST00000560379 RIPOR2Q9Y4F9 1068 aa8.28□□□□□ -1.08
USP8-210ENST00000560379 KDM5DQ9BY66 1539 aa8.28□□□□□ -1.08
USP8-210ENST00000560379 DHX29Q7Z478 1369 aaKnown RBP8.27□□□□□ -1.09
USP8-210ENST00000560379 ANKRD30AQ9BXX3 1397 aa8.27□□□□□ -1.09
USP8-210ENST00000560379 PNMA6FA0A0J9YX94 578 aa8.27□□□□□ -1.09
USP8-210ENST00000560379 TLDC2A0PJX2 215 aa8.27□□□□□ -1.09
USP8-210ENST00000560379 DYRK3O43781 588 aa8.27□□□□□ -1.09
USP8-210ENST00000560379 TSPY4P0CV99 314 aa8.27□□□□□ -1.09
USP8-210ENST00000560379 TSPY10P0CW01 314 aa8.27□□□□□ -1.09
USP8-210ENST00000560379 NID1P14543 1247 aa8.27□□□□□ -1.09
USP8-210ENST00000560379 ENOX2Q16206 610 aaKnown RBP8.27□□□□□ -1.09
USP8-210ENST00000560379 ALG1LQ6GMV1 187 aa8.27□□□□□ -1.09
USP8-210ENST00000560379 RAB44Q7Z6P3 723 aaPredicted RBP8.27□□□□□ -1.09
USP8-210ENST00000560379 SLC9A9Q8IVB4 645 aa8.27□□□□□ -1.09
USP8-210ENST00000560379 MICALL1Q8N3F8 863 aa8.27□□□□□ -1.09
USP8-210ENST00000560379 PRDM6Q9NQX0 595 aa8.27□□□□□ -1.09
USP8-210ENST00000560379 MROH1Q8NDA8 1641 aa8.27□□□□□ -1.09
USP8-210ENST00000560379 KIF15Q9NS87 1388 aa8.26□□□□□ -1.09
USP8-210ENST00000560379 PPP1R12BO60237 982 aaPredicted RBP8.26□□□□□ -1.09
USP8-210ENST00000560379 C20orf204Q6ZNR8 217 aa8.26□□□□□ -1.09
USP8-210ENST00000560379 PMFBP1Q8TBY8 1022 aa8.26□□□□□ -1.09
USP8-210ENST00000560379 NCOA1Q15788 1441 aa8.26□□□□□ -1.09
USP8-210ENST00000560379 UNC13BO14795 1591 aa8.26□□□□□ -1.09
USP8-210ENST00000560379 PTPRMP28827 1452 aa8.26□□□□□ -1.09
USP8-210ENST00000560379 C3P01024 1663 aa8.25□□□□□ -1.09
USP8-210ENST00000560379 CLTCQ00610 1675 aaKnown RBP8.25□□□□□ -1.09
USP8-210ENST00000560379 GNA15P30679 374 aa8.25□□□□□ -1.09
USP8-210ENST00000560379 EXOC8Q8IYI6 725 aa8.25□□□□□ -1.09
USP8-210ENST00000560379 ZBTB39O15060 712 aa8.24□□□□□ -1.09
USP8-210ENST00000560379 MARCH6O60337 910 aa8.24□□□□□ -1.09
USP8-210ENST00000560379 ALAS2P22557 587 aa8.24□□□□□ -1.09
USP8-210ENST00000560379 SPEM2Q0P670 501 aa8.24□□□□□ -1.09
USP8-210ENST00000560379 GRIK4Q16099 956 aa8.24□□□□□ -1.09
USP8-210ENST00000560379 POTEAQ6S8J7 498 aa8.24□□□□□ -1.09
USP8-210ENST00000560379 ATCAYQ86WG3 371 aa8.24□□□□□ -1.09
USP8-210ENST00000560379 ABTB2Q8N961 1025 aa8.24□□□□□ -1.09
USP8-210ENST00000560379 HSH2DQ96JZ2 352 aa8.24□□□□□ -1.09
USP8-210ENST00000560379 C2orf49Q9BVC5 232 aaPredicted RBP8.24□□□□□ -1.09
USP8-210ENST00000560379 PIF1Q9H611 641 aa8.24□□□□□ -1.09
USP8-210ENST00000560379 INPP5FQ9Y2H2 1132 aa8.24□□□□□ -1.09
USP8-210ENST00000560379 PREX1Q8TCU6 1659 aa8.24□□□□□ -1.09
USP8-210ENST00000560379 VWDEQ8N2E2 1590 aa8.23□□□□□ -1.09
USP8-210ENST00000560379 CAMSAP1Q5T5Y3 1602 aa8.23□□□□□ -1.09
USP8-210ENST00000560379 ADH7P40394 386 aa8.23□□□□□ -1.09
USP8-210ENST00000560379 ARID5AQ03989 594 aa8.23□□□□□ -1.09
USP8-210ENST00000560379 RBL2Q08999 1139 aa8.23□□□□□ -1.09
USP8-210ENST00000560379 PRRT3Q5FWE3 981 aa8.23□□□□□ -1.09
USP8-210ENST00000560379 TEX2Q8IWB9 1127 aa8.23□□□□□ -1.09
USP8-210ENST00000560379 QTRT2Q9H974 415 aaKnown RBP8.23□□□□□ -1.09
USP8-210ENST00000560379 LRFN2Q9ULH4 789 aa8.23□□□□□ -1.09
USP8-210ENST00000560379 POLIQ9UNA4 740 aa8.23□□□□□ -1.09
USP8-210ENST00000560379 ABCC3O15438 1527 aa8.23□□□□□ -1.09
USP8-210ENST00000560379 LMTK2Q8IWU2 1503 aa8.23□□□□□ -1.09
USP8-210ENST00000560379 SBNO2Q9Y2G9 1366 aa8.22□□□□□ -1.09
USP8-210ENST00000560379 ZNF142P52746 1687 aaPredicted RBP8.22□□□□□ -1.09
USP8-210ENST00000560379 CTSHP09668 335 aa8.22□□□□□ -1.09
USP8-210ENST00000560379 RACK1P63244 317 aaKnown RBP8.22□□□□□ -1.09
USP8-210ENST00000560379 FAM50AQ14320 339 aaKnown RBP8.22□□□□□ -1.09
USP8-210ENST00000560379 ZNF394Q53GI3 561 aa8.22□□□□□ -1.09
USP8-210ENST00000560379 FAM26DQ5JW98 314 aa8.22□□□□□ -1.09
USP8-210ENST00000560379 GJD3Q8N144 294 aa8.22□□□□□ -1.09
USP8-210ENST00000560379 STAG2Q8N3U4 1231 aa8.22□□□□□ -1.09
USP8-210ENST00000560379 CRELD1Q96HD1 420 aa8.22□□□□□ -1.09
USP8-210ENST00000560379 ZSWIM4Q9H7M6 989 aa8.22□□□□□ -1.09
USP8-210ENST00000560379 DDX41Q9UJV9 622 aaKnown RBP8.22□□□□□ -1.09
USP8-210ENST00000560379 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms