RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 MAST2Q6P0Q8 1798 aa17.21■□□□□ 0.35
ZEB1-218ENST00000560196 MBD4O95243 580 aa17.21■□□□□ 0.35
ZEB1-218ENST00000560196 NAA16Q6N069 864 aaPredicted RBP17.21■□□□□ 0.35
ZEB1-218ENST00000560196 NSUN4Q96CB9 384 aaKnown RBP17.21■□□□□ 0.35
ZEB1-218ENST00000560196 TMX4Q9H1E5 349 aaPredicted RBP17.21■□□□□ 0.35
ZEB1-218ENST00000560196 CD209Q9NNX6 404 aa17.21■□□□□ 0.35
ZEB1-218ENST00000560196 SH2B1Q9NRF2 756 aaPredicted RBP17.21■□□□□ 0.35
ZEB1-218ENST00000560196 E7EWF7 191 aa17.2■□□□□ 0.34
ZEB1-218ENST00000560196 CPA1P15085 419 aa17.2■□□□□ 0.34
ZEB1-218ENST00000560196 CHAF1AQ13111 956 aaPredicted RBP17.2■□□□□ 0.34
ZEB1-218ENST00000560196 STOX1Q6ZVD7 989 aa17.2■□□□□ 0.34
ZEB1-218ENST00000560196 MPNDQ8N594 471 aa17.2■□□□□ 0.34
ZEB1-218ENST00000560196 ZNF622Q969S3 477 aaKnown RBP eCLIP17.2■□□□□ 0.34
ZEB1-218ENST00000560196 MAGEB6P1A0A0J9YX57 407 aa17.19■□□□□ 0.34
ZEB1-218ENST00000560196 C6orf229H3BNL8 230 aa17.19■□□□□ 0.34
ZEB1-218ENST00000560196 CC2D2BQ6DHV5 1058 aa17.19■□□□□ 0.34
ZEB1-218ENST00000560196 TTLL5Q6EMB2 1281 aa17.19■□□□□ 0.34
ZEB1-218ENST00000560196 DHX32Q7L7V1 743 aaKnown RBP17.19■□□□□ 0.34
ZEB1-218ENST00000560196 FBXL16Q8N461 479 aa17.19■□□□□ 0.34
ZEB1-218ENST00000560196 ZNF384Q8TF68 577 aa17.19■□□□□ 0.34
ZEB1-218ENST00000560196 COA1Q9GZY4 146 aa17.19■□□□□ 0.34
ZEB1-218ENST00000560196 FAM205AQ6ZU69 1335 aa17.19■□□□□ 0.34
ZEB1-218ENST00000560196 GSG1L2A8MUP6 293 aa17.18■□□□□ 0.34
ZEB1-218ENST00000560196 ZNF213O14771 459 aa17.18■□□□□ 0.34
ZEB1-218ENST00000560196 MECOMQ03112 1051 aa17.18■□□□□ 0.34
ZEB1-218ENST00000560196 DPP8Q6V1X1 898 aaPredicted RBP17.18■□□□□ 0.34
ZEB1-218ENST00000560196 IFNL3Q8IZI9 196 aa17.18■□□□□ 0.34
ZEB1-218ENST00000560196 LCORLQ8N3X6 602 aa17.18■□□□□ 0.34
ZEB1-218ENST00000560196 EYA3Q99504 573 aa17.18■□□□□ 0.34
ZEB1-218ENST00000560196 RIOK1Q9BRS2 568 aaKnown RBP17.18■□□□□ 0.34
ZEB1-218ENST00000560196 NACAP1Q9BZK3 213 aa17.18■□□□□ 0.34
ZEB1-218ENST00000560196 PDGFDQ9GZP0 370 aaPredicted RBP17.18■□□□□ 0.34
ZEB1-218ENST00000560196 ARMT1Q9H993 441 aa17.18■□□□□ 0.34
ZEB1-218ENST00000560196 KIAA1551Q9HCM1 1747 aa17.18■□□□□ 0.34
ZEB1-218ENST00000560196 LDHBP07195 334 aaKnown RBP17.17■□□□□ 0.34
ZEB1-218ENST00000560196 GSTO1P78417 241 aa17.17■□□□□ 0.34
ZEB1-218ENST00000560196 EXOSC10Q01780 885 aaKnown RBP17.17■□□□□ 0.34
ZEB1-218ENST00000560196 TOB2Q14106 344 aaPredicted RBP17.17■□□□□ 0.34
ZEB1-218ENST00000560196 GRIPAP1Q4V328 841 aa17.17■□□□□ 0.34
ZEB1-218ENST00000560196 GIMAP6Q6P9H5 292 aa17.17■□□□□ 0.34
ZEB1-218ENST00000560196 ADGRA1Q86SQ6 560 aa17.17■□□□□ 0.34
ZEB1-218ENST00000560196 TBC1D22AQ8WUA7 517 aa17.17■□□□□ 0.34
ZEB1-218ENST00000560196 GPR101Q96P66 508 aaPredicted RBP17.17■□□□□ 0.34
ZEB1-218ENST00000560196 RTFDC1Q9BY42 306 aaPredicted RBP17.17■□□□□ 0.34
ZEB1-218ENST00000560196 AGXT2Q9BYV1 514 aa17.17■□□□□ 0.34
ZEB1-218ENST00000560196 EPB41L4AQ9HCS5 686 aaPredicted RBP17.17■□□□□ 0.34
ZEB1-218ENST00000560196 WDR19Q8NEZ3 1342 aa17.17■□□□□ 0.34
ZEB1-218ENST00000560196 LAMA4Q16363 1823 aa17.17■□□□□ 0.34
ZEB1-218ENST00000560196 A0A0G2JLW4 131 aa17.16■□□□□ 0.34
ZEB1-218ENST00000560196 APPP05067 770 aa17.16■□□□□ 0.34
ZEB1-218ENST00000560196 PRDX5P30044 214 aa17.16■□□□□ 0.34
ZEB1-218ENST00000560196 C7orf43Q8WVR3 580 aa17.16■□□□□ 0.34
ZEB1-218ENST00000560196 ZC3H12CQ9C0D7 883 aaKnown RBP17.16■□□□□ 0.34
ZEB1-218ENST00000560196 NAPBQ9H115 298 aa17.16■□□□□ 0.34
ZEB1-218ENST00000560196 SLC4A4Q9Y6R1 1079 aa17.16■□□□□ 0.34
ZEB1-218ENST00000560196 LDHCP07864 332 aa17.15■□□□□ 0.34
ZEB1-218ENST00000560196 NUCB2P80303 420 aa17.15■□□□□ 0.34
ZEB1-218ENST00000560196 COL9A3Q14050 684 aaPredicted RBP17.15■□□□□ 0.34
ZEB1-218ENST00000560196 RAB3GAP1Q15042 981 aa17.15■□□□□ 0.34
ZEB1-218ENST00000560196 NOL8Q76FK4 1167 aaKnown RBP17.15■□□□□ 0.34
ZEB1-218ENST00000560196 ILDR1Q86SU0 546 aaPredicted RBP17.15■□□□□ 0.34
ZEB1-218ENST00000560196 DZIP1Q86YF9 867 aaKnown RBP17.15■□□□□ 0.34
ZEB1-218ENST00000560196 CERS3Q8IU89 383 aa17.15■□□□□ 0.34
ZEB1-218ENST00000560196 MIGA1Q8NAN2 632 aa17.15■□□□□ 0.34
ZEB1-218ENST00000560196 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
ZEB1-218ENST00000560196 SUGT1Q9Y2Z0 365 aa17.15■□□□□ 0.34
ZEB1-218ENST00000560196 DLEC1Q9Y238 1755 aa17.15■□□□□ 0.34
ZEB1-218ENST00000560196 SNED1Q8TER0 1413 aa17.14■□□□□ 0.33
ZEB1-218ENST00000560196 CCDC88AQ3V6T2 1871 aa17.14■□□□□ 0.33
ZEB1-218ENST00000560196 TIAM2Q8IVF5 1701 aa17.14■□□□□ 0.33
ZEB1-218ENST00000560196 CHRNA5P30532 468 aa17.14■□□□□ 0.33
ZEB1-218ENST00000560196 MB21D2Q8IYB1 491 aaPredicted RBP17.14■□□□□ 0.33
ZEB1-218ENST00000560196 NCOA7Q8NI08 942 aa17.14■□□□□ 0.33
ZEB1-218ENST00000560196 ANP32EQ9BTT0 268 aa17.14■□□□□ 0.33
ZEB1-218ENST00000560196 NBPF3Q9H094 633 aa17.14■□□□□ 0.33
ZEB1-218ENST00000560196 TPCN1Q9ULQ1 816 aa17.14■□□□□ 0.33
ZEB1-218ENST00000560196 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.14■□□□□ 0.33
ZEB1-218ENST00000560196 KIF13BQ9NQT8 1826 aa17.14■□□□□ 0.33
ZEB1-218ENST00000560196 SLX4Q8IY92 1834 aa17.13■□□□□ 0.33
ZEB1-218ENST00000560196 PRKAB2O43741 272 aa17.13■□□□□ 0.33
ZEB1-218ENST00000560196 PPP4CP60510 307 aa17.13■□□□□ 0.33
ZEB1-218ENST00000560196 HAND2P61296 217 aa17.13■□□□□ 0.33
ZEB1-218ENST00000560196 Q6ZUG5 572 aa17.13■□□□□ 0.33
ZEB1-218ENST00000560196 FAM163AQ96GL9 167 aaPredicted RBP17.13■□□□□ 0.33
ZEB1-218ENST00000560196 ANAPC4Q9UJX5 808 aa17.13■□□□□ 0.33
ZEB1-218ENST00000560196 LARGE1O95461 756 aa17.12■□□□□ 0.33
ZEB1-218ENST00000560196 MCM5P33992 734 aa17.12■□□□□ 0.33
ZEB1-218ENST00000560196 TDO2P48775 406 aa17.12■□□□□ 0.33
ZEB1-218ENST00000560196 EVCP57679 992 aa17.12■□□□□ 0.33
ZEB1-218ENST00000560196 TRDNQ13061 729 aa17.12■□□□□ 0.33
ZEB1-218ENST00000560196 NFKBIBQ15653 356 aa17.12■□□□□ 0.33
ZEB1-218ENST00000560196 ME3Q16798 604 aa17.12■□□□□ 0.33
ZEB1-218ENST00000560196 RALYLQ86SE5 291 aaKnown RBP17.12■□□□□ 0.33
ZEB1-218ENST00000560196 SLF2Q8IX21 1173 aa17.12■□□□□ 0.33
ZEB1-218ENST00000560196 SUPT20HQ8NEM7 779 aa17.12■□□□□ 0.33
ZEB1-218ENST00000560196 STAG1Q8WVM7 1258 aa17.12■□□□□ 0.33
ZEB1-218ENST00000560196 CRNKL1Q9BZJ0 848 aaKnown RBP17.12■□□□□ 0.33
ZEB1-218ENST00000560196 MTFR1LQ9H019 292 aa17.12■□□□□ 0.33
ZEB1-218ENST00000560196 ATP8A2Q9NTI2 1148 aa17.12■□□□□ 0.33
ZEB1-218ENST00000560196 DYNLL1P63167 89 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms