RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 CLIP2Q9UDT6 1046 aa11.73□□□□□ -0.53
LRRC28-216ENST00000559819 ITGB4P16144 1822 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 LRP6O75581 1613 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 BCL9O00512 1426 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 GOLGA6L19H0YKK7 550 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 PDE6AP16499 860 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 NDUFA8P51970 172 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 LINC00301Q8NCQ3 95 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 FBXO18Q8NFZ0 1043 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 MRPS27Q92552 414 aaKnown RBP11.72□□□□□ -0.53
LRRC28-216ENST00000559819 STRCQ7RTU9 1775 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 ABCC12Q96J65 1359 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 AKAP11Q9UKA4 1901 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 SLIT2O94813 1529 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 PDE8AO60658 829 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 ARID5BQ14865 1188 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 ATL3Q6DD88 541 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 ZSCAN25Q6NSZ9 544 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 DHX40Q8IX18 779 aaKnown RBP11.72□□□□□ -0.53
LRRC28-216ENST00000559819 FMR1NBQ8N0W7 255 aaPredicted RBP11.72□□□□□ -0.53
LRRC28-216ENST00000559819 UBE2Q2Q8WVN8 375 aa11.72□□□□□ -0.53
LRRC28-216ENST00000559819 B4E1Z4 1266 aa11.71□□□□□ -0.53
LRRC28-216ENST00000559819 CTAGE5O15320 804 aa11.71□□□□□ -0.53
LRRC28-216ENST00000559819 SF3A1Q15459 793 aaKnown RBP11.71□□□□□ -0.53
LRRC28-216ENST00000559819 MYSM1Q5VVJ2 828 aa11.71□□□□□ -0.53
LRRC28-216ENST00000559819 NEDD4P46934 1319 aa11.71□□□□□ -0.53
LRRC28-216ENST00000559819 DISP2A7MBM2 1401 aa11.71□□□□□ -0.53
LRRC28-216ENST00000559819 KAT6BQ8WYB5 2073 aa11.71□□□□□ -0.54
LRRC28-216ENST00000559819 SH2B2O14492 632 aaPredicted RBP11.71□□□□□ -0.54
LRRC28-216ENST00000559819 DHX16O60231 1041 aaKnown RBP11.71□□□□□ -0.54
LRRC28-216ENST00000559819 CDC27P30260 824 aa11.71□□□□□ -0.54
LRRC28-216ENST00000559819 KIF23Q02241 960 aaPredicted RBP11.71□□□□□ -0.54
LRRC28-216ENST00000559819 CACTINQ8WUQ7 758 aaKnown RBP11.71□□□□□ -0.54
LRRC28-216ENST00000559819 PHKBQ93100 1093 aa11.71□□□□□ -0.54
LRRC28-216ENST00000559819 PRIMPOLQ96LW4 560 aa11.71□□□□□ -0.54
LRRC28-216ENST00000559819 MYL10Q9BUA6 226 aa11.71□□□□□ -0.54
LRRC28-216ENST00000559819 MYO5AQ9Y4I1 1855 aaKnown RBP11.71□□□□□ -0.54
LRRC28-216ENST00000559819 TCRBV5S4A2TA0A5A2 114 aa11.7□□□□□ -0.54
LRRC28-216ENST00000559819 UBE2Q2LH0YL09 131 aa11.7□□□□□ -0.54
LRRC28-216ENST00000559819 TRDNQ13061 729 aa11.7□□□□□ -0.54
LRRC28-216ENST00000559819 ADALQ6DHV7 355 aa11.7□□□□□ -0.54
LRRC28-216ENST00000559819 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.7□□□□□ -0.54
LRRC28-216ENST00000559819 AOPEPQ8N6M6 819 aa11.7□□□□□ -0.54
LRRC28-216ENST00000559819 SEC31BQ9NQW1 1179 aa11.7□□□□□ -0.54
LRRC28-216ENST00000559819 TACC3Q9Y6A5 838 aa11.7□□□□□ -0.54
LRRC28-216ENST00000559819 SPTLC2O15270 562 aa11.7□□□□□ -0.54
LRRC28-216ENST00000559819 ARID4AP29374 1257 aaPredicted RBP11.7□□□□□ -0.54
LRRC28-216ENST00000559819 METAP2P50579 478 aaKnown RBP eCLIP11.7□□□□□ -0.54
LRRC28-216ENST00000559819 TTF1Q15361 905 aaPredicted RBP11.7□□□□□ -0.54
LRRC28-216ENST00000559819 UBE3CQ15386 1083 aa11.7□□□□□ -0.54
LRRC28-216ENST00000559819 SUSD4Q5VX71 490 aa11.7□□□□□ -0.54
LRRC28-216ENST00000559819 MICU3Q86XE3 530 aa11.7□□□□□ -0.54
LRRC28-216ENST00000559819 CHMP4CQ96CF2 233 aa11.7□□□□□ -0.54
LRRC28-216ENST00000559819 ZNF512BQ96KM6 892 aaPredicted RBP11.7□□□□□ -0.54
LRRC28-216ENST00000559819 EPB41L4AQ9HCS5 686 aaPredicted RBP11.7□□□□□ -0.54
LRRC28-216ENST00000559819 ANGEL1Q9UNK9 670 aaKnown RBP11.7□□□□□ -0.54
LRRC28-216ENST00000559819 MYH7P12883 1935 aa11.7□□□□□ -0.54
LRRC28-216ENST00000559819 C4AP0C0L4 1744 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 C4BP0C0L5 1744 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 BECN2A8MW95 431 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 ATRNO75882 1429 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 MARCKSP29966 332 aaPredicted RBP11.69□□□□□ -0.54
LRRC28-216ENST00000559819 CTDSPL2Q05D32 466 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 ZNF34Q8IZ26 560 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 STK11IPQ8N1F8 1099 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 STRBPQ96SI9 672 aaKnown RBP11.69□□□□□ -0.54
LRRC28-216ENST00000559819 SDF4Q9BRK5 362 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 ALG1Q9BT22 464 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 ANO10Q9NW15 660 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 ZMYM6O95789 1325 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 EXOC5O00471 708 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 FGFR2P21802 821 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 PUM3Q15397 648 aaKnown RBP11.69□□□□□ -0.54
LRRC28-216ENST00000559819 ZNF710Q8N1W2 664 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 MAGEB6Q8N7X4 407 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 AIDAQ96BJ3 306 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 ARMT1Q9H993 441 aa11.69□□□□□ -0.54
LRRC28-216ENST00000559819 DDX60Q8IY21 1712 aaKnown RBP11.69□□□□□ -0.54
LRRC28-216ENST00000559819 MROH7-TTC4A0A0A0MT08 1334 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 A0A1W2PQ27 194 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 A0A1W2PQ64 194 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 A0A1W2PQD8 194 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 BIN1O00499 593 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
LRRC28-216ENST00000559819 PRKAB2O43741 272 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 WDHD1O75717 1129 aaPredicted RBP11.68□□□□□ -0.54
LRRC28-216ENST00000559819 MBD4O95243 580 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 CAVIN2O95810 425 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 RASGRF1Q13972 1273 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 ANO1Q5XXA6 986 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 SPATA5Q8NB90 893 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 LPIN2Q92539 896 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 ACSBG1Q96GR2 724 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 POLR3EQ9NVU0 708 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 NHSL1Q5SYE7 1610 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 WDR19Q8NEZ3 1342 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 CDC25BP30305 580 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 IL6STP40189 918 aaPredicted RBP11.68□□□□□ -0.54
LRRC28-216ENST00000559819 DPCR1Q3MIW9 517 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 APOA5Q6Q788 366 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms