RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 MYH7P12883 1935 aa15.05■□□□□ -0
USP3-213ENST00000559711 GSG1L2A8MUP6 293 aa15.05■□□□□ -0
USP3-213ENST00000559711 APPP05067 770 aa15.05■□□□□ -0
USP3-213ENST00000559711 ALDH1B1P30837 517 aa15.05■□□□□ -0
USP3-213ENST00000559711 ST3GAL1Q11201 340 aa15.05■□□□□ -0
USP3-213ENST00000559711 PKP1Q13835 747 aa15.05■□□□□ -0
USP3-213ENST00000559711 ZNF804AQ7Z570 1209 aa15.05■□□□□ -0
USP3-213ENST00000559711 IFNL3Q8IZI9 196 aa15.05■□□□□ -0
USP3-213ENST00000559711 GBP4Q96PP9 640 aa15.05■□□□□ -0
USP3-213ENST00000559711 ATP6V0A2Q9Y487 856 aa15.05■□□□□ -0
USP3-213ENST00000559711 PPEF1O14829 653 aaPredicted RBP15.04■□□□□ -0
USP3-213ENST00000559711 UFL1O94874 794 aa15.04■□□□□ -0
USP3-213ENST00000559711 BRD1O95696 1058 aa15.04■□□□□ -0
USP3-213ENST00000559711 BAG6P46379 1132 aa15.04■□□□□ -0
USP3-213ENST00000559711 HAND2P61296 217 aa15.04■□□□□ -0
USP3-213ENST00000559711 MSL1Q68DK7 614 aa15.04■□□□□ -0
USP3-213ENST00000559711 NAA16Q6N069 864 aaPredicted RBP15.04■□□□□ -0
USP3-213ENST00000559711 ADGRA1Q86SQ6 560 aa15.04■□□□□ -0
USP3-213ENST00000559711 CCDC83Q8IWF9 413 aa15.04■□□□□ -0
USP3-213ENST00000559711 LCORLQ8N3X6 602 aa15.04■□□□□ -0
USP3-213ENST00000559711 WDR66Q8TBY9 1149 aa15.04■□□□□ -0
USP3-213ENST00000559711 ZNF384Q8TF68 577 aa15.04■□□□□ -0
USP3-213ENST00000559711 NSUN4Q96CB9 384 aaKnown RBP15.04■□□□□ -0
USP3-213ENST00000559711 EPB41L4AQ9HCS5 686 aaPredicted RBP15.04■□□□□ -0
USP3-213ENST00000559711 SF3B2Q13435 895 aaKnown RBP15.03■□□□□ -0
USP3-213ENST00000559711 SPTY2D1Q68D10 685 aaPredicted RBP15.03■□□□□ -0
USP3-213ENST00000559711 TBC1D16Q8TBP0 767 aa15.03■□□□□ -0
USP3-213ENST00000559711 MASTLQ96GX5 879 aa15.03■□□□□ -0
USP3-213ENST00000559711 RIOK1Q9BRS2 568 aaKnown RBP15.03■□□□□ -0
USP3-213ENST00000559711 NBPF3Q9H094 633 aa15.03■□□□□ -0
USP3-213ENST00000559711 POLLQ9UGP5 575 aa15.03■□□□□ -0
USP3-213ENST00000559711 MAGEB6P1A0A0J9YX57 407 aa15.03■□□□□ -0
USP3-213ENST00000559711 IL1R1P14778 569 aa15.03■□□□□ -0
USP3-213ENST00000559711 MECOMQ03112 1051 aa15.03■□□□□ -0
USP3-213ENST00000559711 CHAF1AQ13111 956 aaPredicted RBP15.03■□□□□ -0
USP3-213ENST00000559711 MB21D2Q8IYB1 491 aaPredicted RBP15.03■□□□□ -0
USP3-213ENST00000559711 MIGA1Q8NAN2 632 aa15.03■□□□□ -0
USP3-213ENST00000559711 NCOA7Q8NI08 942 aa15.03■□□□□ -0
USP3-213ENST00000559711 NACAP1Q9BZK3 213 aa15.03■□□□□ -0
USP3-213ENST00000559711 SMC3Q9UQE7 1217 aa15.03■□□□□ -0
USP3-213ENST00000559711 SLC4A4Q9Y6R1 1079 aa15.03■□□□□ -0
USP3-213ENST00000559711 WDR19Q8NEZ3 1342 aa15.02■□□□□ -0
USP3-213ENST00000559711 MYO5AQ9Y4I1 1855 aaKnown RBP15.02■□□□□ -0
USP3-213ENST00000559711 PRKAB2O43741 272 aa15.02□□□□□ -0.01
USP3-213ENST00000559711 NECAB1Q8N987 351 aa15.02□□□□□ -0.01
USP3-213ENST00000559711 BRF1Q92994 677 aa15.02□□□□□ -0.01
USP3-213ENST00000559711 NAPBQ9H115 298 aa15.02□□□□□ -0.01
USP3-213ENST00000559711 CD209Q9NNX6 404 aa15.02□□□□□ -0.01
USP3-213ENST00000559711 DDX11L8A8MPP1 907 aa15.01□□□□□ -0.01
USP3-213ENST00000559711 BAG4O95429 457 aaKnown RBP15.01□□□□□ -0.01
USP3-213ENST00000559711 PRDX5P30044 214 aa15.01□□□□□ -0.01
USP3-213ENST00000559711 MCM5P33992 734 aa15.01□□□□□ -0.01
USP3-213ENST00000559711 EVCP57679 992 aa15.01□□□□□ -0.01
USP3-213ENST00000559711 TBC1D10CQ8IV04 446 aa15.01□□□□□ -0.01
USP3-213ENST00000559711 GPR101Q96P66 508 aaPredicted RBP15.01□□□□□ -0.01
USP3-213ENST00000559711 LRRC2Q9BYS8 371 aa15.01□□□□□ -0.01
USP3-213ENST00000559711 FGD1P98174 961 aa15□□□□□ -0.01
USP3-213ENST00000559711 TRDNQ13061 729 aa15□□□□□ -0.01
USP3-213ENST00000559711 DEFB132Q7Z7B7 95 aa15□□□□□ -0.01
USP3-213ENST00000559711 RALYLQ86SE5 291 aaKnown RBP15□□□□□ -0.01
USP3-213ENST00000559711 GTF3C6Q969F1 213 aa15□□□□□ -0.01
USP3-213ENST00000559711 ANKRD31Q8N7Z5 1873 aa15□□□□□ -0.01
USP3-213ENST00000559711 PFKFB2O60825 505 aa15□□□□□ -0.01
USP3-213ENST00000559711 GJB2P29033 226 aa15□□□□□ -0.01
USP3-213ENST00000559711 STYK1Q6J9G0 422 aa15□□□□□ -0.01
USP3-213ENST00000559711 GIMAP6Q6P9H5 292 aa15□□□□□ -0.01
USP3-213ENST00000559711 ZNF274Q96GC6 653 aaPredicted RBP15□□□□□ -0.01
USP3-213ENST00000559711 CACNA1SQ13698 1873 aa15□□□□□ -0.01
USP3-213ENST00000559711 WDR33Q9C0J8 1336 aaKnown RBP14.99□□□□□ -0.01
USP3-213ENST00000559711 C6orf229H3BNL8 230 aa14.99□□□□□ -0.01
USP3-213ENST00000559711 PRC1O43663 620 aa14.99□□□□□ -0.01
USP3-213ENST00000559711 PDIA4P13667 645 aaKnown RBP14.99□□□□□ -0.01
USP3-213ENST00000559711 PTMSP20962 102 aa14.99□□□□□ -0.01
USP3-213ENST00000559711 TDO2P48775 406 aa14.99□□□□□ -0.01
USP3-213ENST00000559711 ANTXR2P58335 489 aa14.99□□□□□ -0.01
USP3-213ENST00000559711 DYNLL1P63167 89 aaKnown RBP14.99□□□□□ -0.01
USP3-213ENST00000559711 CHST3Q7LGC8 479 aa14.99□□□□□ -0.01
USP3-213ENST00000559711 C2CD5Q86YS7 1000 aa14.99□□□□□ -0.01
USP3-213ENST00000559711 H0YIN7 160 aa14.98□□□□□ -0.01
USP3-213ENST00000559711 LDHBP07195 334 aaKnown RBP14.98□□□□□ -0.01
USP3-213ENST00000559711 SYT1P21579 422 aa14.98□□□□□ -0.01
USP3-213ENST00000559711 APOBRQ0VD83 1088 aa14.98□□□□□ -0.01
USP3-213ENST00000559711 AKNAD1Q5T1N1 836 aa14.98□□□□□ -0.01
USP3-213ENST00000559711 MPNDQ8N594 471 aa14.98□□□□□ -0.01
USP3-213ENST00000559711 ANAPC4Q9UJX5 808 aa14.98□□□□□ -0.01
USP3-213ENST00000559711 JAG2Q9Y219 1238 aa14.98□□□□□ -0.01
USP3-213ENST00000559711 LRRC37AA6NMS7 1700 aa14.98□□□□□ -0.01
USP3-213ENST00000559711 STX6O43752 255 aa14.97□□□□□ -0.01
USP3-213ENST00000559711 STK3Q13188 491 aa14.97□□□□□ -0.01
USP3-213ENST00000559711 DZIP1Q86YF9 867 aaKnown RBP14.97□□□□□ -0.01
USP3-213ENST00000559711 SDR42E1Q8WUS8 393 aa14.97□□□□□ -0.01
USP3-213ENST00000559711 STAG1Q8WVM7 1258 aa14.97□□□□□ -0.01
USP3-213ENST00000559711 LLPHQ9BRT6 129 aaKnown RBP14.97□□□□□ -0.01
USP3-213ENST00000559711 COA1Q9GZY4 146 aa14.97□□□□□ -0.01
USP3-213ENST00000559711 CNNM2Q9H8M5 875 aa14.97□□□□□ -0.01
USP3-213ENST00000559711 LTBP1Q14766 1721 aa14.97□□□□□ -0.01
USP3-213ENST00000559711 GOLGA6L22H0YM25 854 aa14.97□□□□□ -0.01
USP3-213ENST00000559711 PDIA3P30101 505 aaKnown RBP14.97□□□□□ -0.01
USP3-213ENST00000559711 GSTO1P78417 241 aa14.97□□□□□ -0.01
USP3-213ENST00000559711 SCRN1Q12765 414 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms