RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TSHZ3Q63HK5 1081 aa14.04□□□□□ -0.16
SNX1-204ENST00000559061 CLASRPQ8N2M8 674 aaKnown RBP14.04□□□□□ -0.16
SNX1-204ENST00000559061 SMC1BQ8NDV3 1235 aa14.04□□□□□ -0.16
SNX1-204ENST00000559061 WDR66Q8TBY9 1149 aa14.04□□□□□ -0.16
SNX1-204ENST00000559061 TBC1D22AQ8WUA7 517 aa14.04□□□□□ -0.16
SNX1-204ENST00000559061 PRMT6Q96LA8 375 aaPredicted RBP14.04□□□□□ -0.16
SNX1-204ENST00000559061 ANTXR1Q9H6X2 564 aa14.04□□□□□ -0.16
SNX1-204ENST00000559061 GNL3LQ9NVN8 582 aaKnown RBP14.04□□□□□ -0.16
SNX1-204ENST00000559061 SPDYE2BA6NHP3 402 aa14.03□□□□□ -0.16
SNX1-204ENST00000559061 TRAF5O00463 557 aa14.03□□□□□ -0.16
SNX1-204ENST00000559061 FRAT2O75474 233 aaPredicted RBP14.03□□□□□ -0.16
SNX1-204ENST00000559061 UQCRFS1P1P0C7P4 283 aa14.03□□□□□ -0.16
SNX1-204ENST00000559061 SPDYE6P0CI01 402 aa14.03□□□□□ -0.16
SNX1-204ENST00000559061 CRKP46108 304 aa14.03□□□□□ -0.16
SNX1-204ENST00000559061 FSTL1Q12841 308 aa14.03□□□□□ -0.16
SNX1-204ENST00000559061 TTC39AQ5SRH9 613 aa14.03□□□□□ -0.16
SNX1-204ENST00000559061 EDC3Q96F86 508 aaKnown RBP14.03□□□□□ -0.16
SNX1-204ENST00000559061 GLIS2Q9BZE0 524 aaPredicted RBP14.03□□□□□ -0.16
SNX1-204ENST00000559061 GGA3Q9NZ52 723 aa14.03□□□□□ -0.16
SNX1-204ENST00000559061 SUGT1Q9Y2Z0 365 aa14.03□□□□□ -0.16
SNX1-204ENST00000559061 MYH7P12883 1935 aa14.03□□□□□ -0.16
SNX1-204ENST00000559061 PAPPA2Q9BXP8 1791 aa14.02□□□□□ -0.16
SNX1-204ENST00000559061 SSC5DA1L4H1 1573 aa14.02□□□□□ -0.16
SNX1-204ENST00000559061 RFX7Q2KHR2 1363 aa14.02□□□□□ -0.17
SNX1-204ENST00000559061 GAKO14976 1311 aa14.02□□□□□ -0.17
SNX1-204ENST00000559061 ADM5C9JUS6 153 aa14.02□□□□□ -0.17
SNX1-204ENST00000559061 GORABQ5T7V8 394 aa14.02□□□□□ -0.17
SNX1-204ENST00000559061 ANGEL2Q5VTE6 544 aaKnown RBP14.02□□□□□ -0.17
SNX1-204ENST00000559061 APOBEC3HQ6NTF7 200 aaKnown RBP14.02□□□□□ -0.17
SNX1-204ENST00000559061 CNTROBQ8N137 903 aa14.02□□□□□ -0.17
SNX1-204ENST00000559061 ZC3H15Q8WU90 426 aaKnown RBP14.02□□□□□ -0.17
SNX1-204ENST00000559061 GCC1Q96CN9 775 aa14.02□□□□□ -0.17
SNX1-204ENST00000559061 BCL11AQ9H165 835 aa14.02□□□□□ -0.17
SNX1-204ENST00000559061 SERPINA10Q9UK55 444 aa14.02□□□□□ -0.17
SNX1-204ENST00000559061 DAGLAQ9Y4D2 1042 aa14.02□□□□□ -0.17
SNX1-204ENST00000559061 FOCADQ5VW36 1801 aa14.01□□□□□ -0.17
SNX1-204ENST00000559061 IFIT2P09913 472 aaKnown RBP14.01□□□□□ -0.17
SNX1-204ENST00000559061 CCDC158Q5M9N0 1113 aa14.01□□□□□ -0.17
SNX1-204ENST00000559061 ADGRA1Q86SQ6 560 aa14.01□□□□□ -0.17
SNX1-204ENST00000559061 PI4K2BQ8TCG2 481 aa14.01□□□□□ -0.17
SNX1-204ENST00000559061 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.01□□□□□ -0.17
SNX1-204ENST00000559061 ZDHHC15Q96MV8 337 aa14.01□□□□□ -0.17
SNX1-204ENST00000559061 PITPNM2Q9BZ72 1349 aa14□□□□□ -0.17
SNX1-204ENST00000559061 CHGBP05060 677 aa14□□□□□ -0.17
SNX1-204ENST00000559061 LDHBP07195 334 aaKnown RBP14□□□□□ -0.17
SNX1-204ENST00000559061 ATP5JP18859 108 aa14□□□□□ -0.17
SNX1-204ENST00000559061 MMP14P50281 582 aa14□□□□□ -0.17
SNX1-204ENST00000559061 HDLBPQ00341 1268 aaKnown RBP14□□□□□ -0.17
SNX1-204ENST00000559061 MECOMQ03112 1051 aa14□□□□□ -0.17
SNX1-204ENST00000559061 SPDYE2Q495Y8 402 aa14□□□□□ -0.17
SNX1-204ENST00000559061 CDAN1Q8IWY9 1227 aa14□□□□□ -0.17
SNX1-204ENST00000559061 OGFOD1Q8N543 542 aa14□□□□□ -0.17
SNX1-204ENST00000559061 NSUN4Q96CB9 384 aaKnown RBP14□□□□□ -0.17
SNX1-204ENST00000559061 MRIQ9BWK5 157 aa14□□□□□ -0.17
SNX1-204ENST00000559061 RWDD1Q9H446 243 aaPredicted RBP14□□□□□ -0.17
SNX1-204ENST00000559061 ABCF2Q9UG63 623 aa14□□□□□ -0.17
SNX1-204ENST00000559061 HDAC9Q9UKV0 1011 aa14□□□□□ -0.17
SNX1-204ENST00000559061 CLEC11AQ9Y240 323 aa14□□□□□ -0.17
SNX1-204ENST00000559061 CNTNAP1P78357 1384 aa13.99□□□□□ -0.17
SNX1-204ENST00000559061 CLRN2A0PK11 232 aa13.99□□□□□ -0.17
SNX1-204ENST00000559061 NUCB1Q02818 461 aa13.99□□□□□ -0.17
SNX1-204ENST00000559061 DLGAP5Q15398 846 aa13.99□□□□□ -0.17
SNX1-204ENST00000559061 ANKRD45Q5TZF3 282 aa13.99□□□□□ -0.17
SNX1-204ENST00000559061 CST9Q5W186 159 aa13.99□□□□□ -0.17
SNX1-204ENST00000559061 HHIPL2Q6UWX4 724 aa13.99□□□□□ -0.17
SNX1-204ENST00000559061 USP48Q86UV5 1035 aa13.99□□□□□ -0.17
SNX1-204ENST00000559061 HAUS7Q99871 368 aa13.99□□□□□ -0.17
SNX1-204ENST00000559061 BOLA2Q9H3K6 86 aa13.99□□□□□ -0.17
SNX1-204ENST00000559061 TDRD3Q9H7E2 651 aaKnown RBP13.99□□□□□ -0.17
SNX1-204ENST00000559061 SIPA1L1O43166 1804 aa13.99□□□□□ -0.17
SNX1-204ENST00000559061 DDX60LQ5H9U9 1706 aaKnown RBP13.98□□□□□ -0.17
SNX1-204ENST00000559061 PDE4AP27815 886 aa13.98□□□□□ -0.17
SNX1-204ENST00000559061 CACNB3P54284 484 aa13.98□□□□□ -0.17
SNX1-204ENST00000559061 HTRA3P83110 453 aa13.98□□□□□ -0.17
SNX1-204ENST00000559061 SLFNL1Q499Z3 407 aa13.98□□□□□ -0.17
SNX1-204ENST00000559061 B4GALNT3Q6L9W6 998 aa13.98□□□□□ -0.17
SNX1-204ENST00000559061 TEKT1Q969V4 418 aa13.98□□□□□ -0.17
SNX1-204ENST00000559061 FAM163AQ96GL9 167 aaPredicted RBP13.98□□□□□ -0.17
SNX1-204ENST00000559061 LNPKQ9C0E8 428 aa13.98□□□□□ -0.17
SNX1-204ENST00000559061 ECHDC1Q9NTX5 307 aa13.98□□□□□ -0.17
SNX1-204ENST00000559061 ZNF70Q9UC06 446 aaPredicted RBP13.98□□□□□ -0.17
SNX1-204ENST00000559061 OTOFQ9HC10 1997 aa13.98□□□□□ -0.17
SNX1-204ENST00000559061 MROH7-TTC4A0A0A0MT08 1334 aa13.97□□□□□ -0.17
SNX1-204ENST00000559061 MAST3O60307 1309 aa13.97□□□□□ -0.17
SNX1-204ENST00000559061 RHBDL3P58872 404 aa13.97□□□□□ -0.17
SNX1-204ENST00000559061 PRAMEF18Q5VWM3 479 aa13.97□□□□□ -0.17
SNX1-204ENST00000559061 CDC42EP5Q6NZY7 148 aa13.97□□□□□ -0.17
SNX1-204ENST00000559061 ERICH6Q7L0X2 663 aa13.97□□□□□ -0.17
SNX1-204ENST00000559061 KRT26Q7Z3Y9 468 aa13.97□□□□□ -0.17
SNX1-204ENST00000559061 ZGPATQ8N5A5 531 aaKnown RBP13.97□□□□□ -0.17
SNX1-204ENST00000559061 TCRBV5S4A2TA0A5A2 114 aa13.96□□□□□ -0.17
SNX1-204ENST00000559061 GOLIM4O00461 696 aa13.96□□□□□ -0.17
SNX1-204ENST00000559061 HSPA6P17066 643 aa13.96□□□□□ -0.17
SNX1-204ENST00000559061 MX1P20591 662 aa13.96□□□□□ -0.17
SNX1-204ENST00000559061 NFIAQ12857 509 aa13.96□□□□□ -0.17
SNX1-204ENST00000559061 CDC37L1Q7L3B6 337 aa13.96□□□□□ -0.17
SNX1-204ENST00000559061 CHD1LQ86WJ1 897 aa13.96□□□□□ -0.17
SNX1-204ENST00000559061 CDCA5Q96FF9 252 aa13.96□□□□□ -0.17
SNX1-204ENST00000559061 TEPSINQ96N21 525 aa13.96□□□□□ -0.17
SNX1-204ENST00000559061 DNAJC2Q99543 621 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms