RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 A0A1W2PPC1 479 aa9.61□□□□□ -0.87
HMG20A-207ENST00000559035 BTBD19C9JJ37 291 aa9.61□□□□□ -0.87
HMG20A-207ENST00000559035 DLL1O00548 723 aa9.61□□□□□ -0.87
HMG20A-207ENST00000559035 SOX1O00570 391 aaPredicted RBP9.61□□□□□ -0.87
HMG20A-207ENST00000559035 TAF5LO75529 589 aa9.61□□□□□ -0.87
HMG20A-207ENST00000559035 MYCP01106 439 aaPredicted RBP9.61□□□□□ -0.87
HMG20A-207ENST00000559035 KCNJ4P48050 445 aa9.61□□□□□ -0.87
HMG20A-207ENST00000559035 GJA8P48165 433 aa9.61□□□□□ -0.87
HMG20A-207ENST00000559035 NEXNQ0ZGT2 675 aa9.61□□□□□ -0.87
HMG20A-207ENST00000559035 C17orf99Q6UX52 265 aa9.61□□□□□ -0.87
HMG20A-207ENST00000559035 G2E3Q7L622 706 aa9.61□□□□□ -0.87
HMG20A-207ENST00000559035 ZNF804AQ7Z570 1209 aa9.61□□□□□ -0.87
HMG20A-207ENST00000559035 TMEM39BQ9GZU3 492 aa9.61□□□□□ -0.87
HMG20A-207ENST00000559035 JAG2Q9Y219 1238 aa9.61□□□□□ -0.87
HMG20A-207ENST00000559035 EYSQ5T1H1 3165 aa9.61□□□□□ -0.87
HMG20A-207ENST00000559035 ZBTB7BO15156 539 aaPredicted RBP9.6□□□□□ -0.87
HMG20A-207ENST00000559035 GJB1P08034 283 aa9.6□□□□□ -0.87
HMG20A-207ENST00000559035 MAP3K9P80192 1104 aa9.6□□□□□ -0.87
HMG20A-207ENST00000559035 CALD1Q05682 793 aaKnown RBP9.6□□□□□ -0.87
HMG20A-207ENST00000559035 WDR43Q15061 677 aaKnown RBP eCLIP9.6□□□□□ -0.87
HMG20A-207ENST00000559035 HELBQ8NG08 1087 aaPredicted RBP9.6□□□□□ -0.87
HMG20A-207ENST00000559035 TDRD7Q8NHU6 1098 aaKnown RBP9.6□□□□□ -0.87
HMG20A-207ENST00000559035 TRIM47Q96LD4 638 aa9.6□□□□□ -0.87
HMG20A-207ENST00000559035 TDRD3Q9H7E2 651 aaKnown RBP9.6□□□□□ -0.87
HMG20A-207ENST00000559035 SRRDQ9UH36 339 aa9.6□□□□□ -0.87
HMG20A-207ENST00000559035 MUC3AQ02505 3323 aa9.59□□□□□ -0.87
HMG20A-207ENST00000559035 ANKRD18BA2A2Z9 1011 aa9.59□□□□□ -0.87
HMG20A-207ENST00000559035 IRF6O14896 467 aa9.59□□□□□ -0.87
HMG20A-207ENST00000559035 CETPP11597 493 aa9.59□□□□□ -0.87
HMG20A-207ENST00000559035 OSBPP22059 807 aa9.59□□□□□ -0.87
HMG20A-207ENST00000559035 FOXO4P98177 505 aa9.59□□□□□ -0.87
HMG20A-207ENST00000559035 PPIL2Q13356 520 aa9.59□□□□□ -0.87
HMG20A-207ENST00000559035 MOGSQ13724 837 aa9.59□□□□□ -0.87
HMG20A-207ENST00000559035 MFSD14BQ5SR56 506 aa9.59□□□□□ -0.87
HMG20A-207ENST00000559035 ERO1BQ86YB8 467 aa9.59□□□□□ -0.87
HMG20A-207ENST00000559035 DZIP1LQ8IYY4 767 aaKnown RBP9.59□□□□□ -0.87
HMG20A-207ENST00000559035 NKX2-3Q8TAU0 364 aa9.59□□□□□ -0.87
HMG20A-207ENST00000559035 CHMP4AQ9BY43 222 aa9.59□□□□□ -0.87
HMG20A-207ENST00000559035 CSADQ9Y600 493 aa9.59□□□□□ -0.87
HMG20A-207ENST00000559035 MGAMO43451 1857 aa9.59□□□□□ -0.87
HMG20A-207ENST00000559035 CDH23Q9H251 3354 aa9.58□□□□□ -0.88
HMG20A-207ENST00000559035 CACNA1FO60840 1977 aa9.58□□□□□ -0.88
HMG20A-207ENST00000559035 APAF1O14727 1248 aa9.58□□□□□ -0.88
HMG20A-207ENST00000559035 GRK4P32298 578 aa9.58□□□□□ -0.88
HMG20A-207ENST00000559035 CRKP46108 304 aa9.58□□□□□ -0.88
HMG20A-207ENST00000559035 MNX1P50219 401 aaPredicted RBP9.58□□□□□ -0.88
HMG20A-207ENST00000559035 FLIIQ13045 1269 aa9.58□□□□□ -0.88
HMG20A-207ENST00000559035 SNAPC2Q13487 334 aa9.58□□□□□ -0.88
HMG20A-207ENST00000559035 GRIK5Q16478 980 aa9.58□□□□□ -0.88
HMG20A-207ENST00000559035 SLC17A8Q8NDX2 589 aa9.58□□□□□ -0.88
HMG20A-207ENST00000559035 LINS1Q8NG48 757 aa9.58□□□□□ -0.88
HMG20A-207ENST00000559035 HTATIP2Q9BUP3 242 aa9.58□□□□□ -0.88
HMG20A-207ENST00000559035 TTF2Q9UNY4 1162 aaKnown RBP9.58□□□□□ -0.88
HMG20A-207ENST00000559035 RIPOR2Q9Y4F9 1068 aa9.58□□□□□ -0.88
HMG20A-207ENST00000559035 TCP10L2B9ZVM9 353 aa9.57□□□□□ -0.88
HMG20A-207ENST00000559035 CCL5P13501 91 aa9.57□□□□□ -0.88
HMG20A-207ENST00000559035 RBM5P52756 815 aaKnown RBP eCLIP9.57□□□□□ -0.88
HMG20A-207ENST00000559035 KIF22Q14807 665 aa9.57□□□□□ -0.88
HMG20A-207ENST00000559035 EPHA10Q5JZY3 1008 aa9.57□□□□□ -0.88
HMG20A-207ENST00000559035 ANKRD23Q86SG2 305 aa9.57□□□□□ -0.88
HMG20A-207ENST00000559035 DNAAF4Q8WXU2 420 aa9.57□□□□□ -0.88
HMG20A-207ENST00000559035 DPF3Q92784 378 aa9.57□□□□□ -0.88
HMG20A-207ENST00000559035 TSR2Q969E8 191 aaKnown RBP9.57□□□□□ -0.88
HMG20A-207ENST00000559035 LRCH3Q96II8 777 aa9.57□□□□□ -0.88
HMG20A-207ENST00000559035 WRNIP1Q96S55 665 aa9.57□□□□□ -0.88
HMG20A-207ENST00000559035 MYH16Q9H6N6 1097 aa9.57□□□□□ -0.88
HMG20A-207ENST00000559035 KCNH4Q9UQ05 1017 aa9.57□□□□□ -0.88
HMG20A-207ENST00000559035 TTC28Q96AY4 2481 aa9.57□□□□□ -0.88
HMG20A-207ENST00000559035 MYPNQ86TC9 1320 aa9.56□□□□□ -0.88
HMG20A-207ENST00000559035 PTPRFP10586 1907 aa9.56□□□□□ -0.88
HMG20A-207ENST00000559035 PRUNE2Q8WUY3 3088 aa9.56□□□□□ -0.88
HMG20A-207ENST00000559035 ATRNL1Q5VV63 1379 aa9.56□□□□□ -0.88
HMG20A-207ENST00000559035 FARP2O94887 1054 aaPredicted RBP9.56□□□□□ -0.88
HMG20A-207ENST00000559035 BCRP11274 1271 aa9.56□□□□□ -0.88
HMG20A-207ENST00000559035 PSMC4P43686 418 aa9.56□□□□□ -0.88
HMG20A-207ENST00000559035 TNNI2P48788 182 aa9.56□□□□□ -0.88
HMG20A-207ENST00000559035 HDLBPQ00341 1268 aaKnown RBP9.56□□□□□ -0.88
HMG20A-207ENST00000559035 PRKCZQ05513 592 aa9.56□□□□□ -0.88
HMG20A-207ENST00000559035 IFIT5Q13325 482 aaKnown RBP9.56□□□□□ -0.88
HMG20A-207ENST00000559035 FKBP1CQ5VVH2 108 aa9.56□□□□□ -0.88
HMG20A-207ENST00000559035 FAM83AQ86UY5 434 aa9.56□□□□□ -0.88
HMG20A-207ENST00000559035 U2AF1L4Q8WU68 220 aaKnown RBP9.56□□□□□ -0.88
HMG20A-207ENST00000559035 ZKSCAN4Q969J2 545 aaPredicted RBP9.56□□□□□ -0.88
HMG20A-207ENST00000559035 FAM84BQ96KN1 310 aaPredicted RBP9.56□□□□□ -0.88
HMG20A-207ENST00000559035 STK31Q9BXU1 1019 aa9.56□□□□□ -0.88
HMG20A-207ENST00000559035 CPA4Q9UI42 421 aa9.56□□□□□ -0.88
HMG20A-207ENST00000559035 WDHD1O75717 1129 aaPredicted RBP9.55□□□□□ -0.88
HMG20A-207ENST00000559035 GYG1P46976 350 aa9.55□□□□□ -0.88
HMG20A-207ENST00000559035 CACNB3P54284 484 aa9.55□□□□□ -0.88
HMG20A-207ENST00000559035 PPATQ06203 517 aa9.55□□□□□ -0.88
HMG20A-207ENST00000559035 UBE4AQ14139 1066 aa9.55□□□□□ -0.88
HMG20A-207ENST00000559035 TWISTNBQ3B726 338 aaPredicted RBP9.55□□□□□ -0.88
HMG20A-207ENST00000559035 GPR153Q6NV75 609 aa9.55□□□□□ -0.88
HMG20A-207ENST00000559035 SLAIN1Q8ND83 568 aa9.55□□□□□ -0.88
HMG20A-207ENST00000559035 ZDHHC15Q96MV8 337 aa9.55□□□□□ -0.88
HMG20A-207ENST00000559035 ZNF112Q9UJU3 913 aa9.55□□□□□ -0.88
HMG20A-207ENST00000559035 NR2E3Q9Y5X4 410 aa9.55□□□□□ -0.88
HMG20A-207ENST00000559035 DOCK2Q92608 1830 aa9.54□□□□□ -0.88
HMG20A-207ENST00000559035 COL2A1P02458 1487 aaPredicted RBP9.54□□□□□ -0.88
HMG20A-207ENST00000559035 RFX7Q2KHR2 1363 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms