RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 ZAR1Q86SH2 424 aa5.31□□□□□ -1.56
LRRC28-212ENST00000558911 AGBL5Q8NDL9 886 aa5.31□□□□□ -1.56
LRRC28-212ENST00000558911 BSNDQ8WZ55 320 aa5.31□□□□□ -1.56
LRRC28-212ENST00000558911 CCDC97Q96F63 343 aaPredicted RBP5.31□□□□□ -1.56
LRRC28-212ENST00000558911 ZKSCAN3Q9BRR0 538 aa5.31□□□□□ -1.56
LRRC28-212ENST00000558911 YIPF2Q9BWQ6 316 aa5.31□□□□□ -1.56
LRRC28-212ENST00000558911 GGNBP2Q9H3C7 697 aa5.31□□□□□ -1.56
LRRC28-212ENST00000558911 LGR6Q9HBX8 967 aa5.31□□□□□ -1.56
LRRC28-212ENST00000558911 PAK6Q9NQU5 681 aaPredicted RBP5.31□□□□□ -1.56
LRRC28-212ENST00000558911 PRKAG2Q9UGJ0 569 aa5.31□□□□□ -1.56
LRRC28-212ENST00000558911 ZC3H7BQ9UGR2 993 aaKnown RBP5.31□□□□□ -1.56
LRRC28-212ENST00000558911 SEPT3Q9UH03 358 aa5.31□□□□□ -1.56
LRRC28-212ENST00000558911 SERPINA10Q9UK55 444 aa5.31□□□□□ -1.56
LRRC28-212ENST00000558911 NFICP08651 508 aa5.3□□□□□ -1.56
LRRC28-212ENST00000558911 PLCL1Q15111 1095 aa5.3□□□□□ -1.56
LRRC28-212ENST00000558911 CPSF6Q16630 551 aaKnown RBP eCLIP5.3□□□□□ -1.56
LRRC28-212ENST00000558911 ZNF574Q6ZN55 896 aaPredicted RBP5.3□□□□□ -1.56
LRRC28-212ENST00000558911 VN1R5Q7Z5H4 357 aa5.3□□□□□ -1.56
LRRC28-212ENST00000558911 TMEM102Q8N9M5 508 aaPredicted RBP5.3□□□□□ -1.56
LRRC28-212ENST00000558911 C2CD4AQ8NCU7 369 aaPredicted RBP5.3□□□□□ -1.56
LRRC28-212ENST00000558911 NXPE3Q969Y0 559 aa5.3□□□□□ -1.56
LRRC28-212ENST00000558911 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.29□□□□□ -1.56
LRRC28-212ENST00000558911 EREGO14944 169 aa5.29□□□□□ -1.56
LRRC28-212ENST00000558911 ITGB5P18084 799 aa5.29□□□□□ -1.56
LRRC28-212ENST00000558911 SOX4Q06945 474 aaPredicted RBP5.29□□□□□ -1.56
LRRC28-212ENST00000558911 TMEM164Q5U3C3 297 aa5.29□□□□□ -1.56
LRRC28-212ENST00000558911 ZNF765Q7L2R6 523 aa5.29□□□□□ -1.56
LRRC28-212ENST00000558911 DYMQ7RTS9 669 aa5.29□□□□□ -1.56
LRRC28-212ENST00000558911 RETREG2Q8NC44 543 aa5.29□□□□□ -1.56
LRRC28-212ENST00000558911 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
LRRC28-212ENST00000558911 CHRDQ9H2X0 955 aa5.29□□□□□ -1.56
LRRC28-212ENST00000558911 SUGCTQ9HAC7 445 aa5.29□□□□□ -1.56
LRRC28-212ENST00000558911 METTL12A8MUP2 240 aa5.28□□□□□ -1.56
LRRC28-212ENST00000558911 RPLP1P05386 114 aaKnown RBP5.28□□□□□ -1.56
LRRC28-212ENST00000558911 AAMPQ13685 434 aa5.28□□□□□ -1.56
LRRC28-212ENST00000558911 AKAP4Q5JQC9 854 aa5.28□□□□□ -1.56
LRRC28-212ENST00000558911 RAD18Q9NS91 495 aa5.28□□□□□ -1.56
LRRC28-212ENST00000558911 ACTL7BQ9Y614 415 aa5.28□□□□□ -1.56
LRRC28-212ENST00000558911 SYNJ2O15056 1496 aa5.27□□□□□ -1.57
LRRC28-212ENST00000558911 E9PSI1 815 aa5.27□□□□□ -1.57
LRRC28-212ENST00000558911 PHACTR2O75167 634 aa5.27□□□□□ -1.57
LRRC28-212ENST00000558911 PAPLNO95428 1278 aa5.27□□□□□ -1.57
LRRC28-212ENST00000558911 PDGFAP04085 211 aa5.27□□□□□ -1.57
LRRC28-212ENST00000558911 ESRRAP11474 423 aaPredicted RBP5.27□□□□□ -1.57
LRRC28-212ENST00000558911 ADH5P11766 374 aa5.27□□□□□ -1.57
LRRC28-212ENST00000558911 BNIP3Q12983 259 aa5.27□□□□□ -1.57
LRRC28-212ENST00000558911 ELOAQ14241 798 aaKnown RBP5.27□□□□□ -1.57
LRRC28-212ENST00000558911 PMEPA1Q969W9 287 aa5.27□□□□□ -1.57
LRRC28-212ENST00000558911 AP4E1Q9UPM8 1137 aa5.27□□□□□ -1.57
LRRC28-212ENST00000558911 SLC5A6Q9Y289 635 aa5.27□□□□□ -1.57
LRRC28-212ENST00000558911 MAP7Q14244 749 aa5.26□□□□□ -1.57
LRRC28-212ENST00000558911 ZNF792Q3KQV3 632 aa5.26□□□□□ -1.57
LRRC28-212ENST00000558911 NOM1Q5C9Z4 860 aaKnown RBP5.26□□□□□ -1.57
LRRC28-212ENST00000558911 GATA6Q92908 595 aa5.26□□□□□ -1.57
LRRC28-212ENST00000558911 LATS2Q9NRM7 1088 aa5.26□□□□□ -1.57
LRRC28-212ENST00000558911 FOXD3Q9UJU5 478 aaPredicted RBP5.26□□□□□ -1.57
LRRC28-212ENST00000558911 DAGLAQ9Y4D2 1042 aa5.26□□□□□ -1.57
LRRC28-212ENST00000558911 BIN1O00499 593 aa5.25□□□□□ -1.57
LRRC28-212ENST00000558911 EDN3P14138 238 aa5.25□□□□□ -1.57
LRRC28-212ENST00000558911 ATP2B4P23634 1241 aa5.25□□□□□ -1.57
LRRC28-212ENST00000558911 MPSTP25325 297 aa5.25□□□□□ -1.57
LRRC28-212ENST00000558911 MAOBP27338 520 aa5.25□□□□□ -1.57
LRRC28-212ENST00000558911 PKN1Q16512 942 aa5.25□□□□□ -1.57
LRRC28-212ENST00000558911 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
LRRC28-212ENST00000558911 XKR5Q6UX68 686 aa5.25□□□□□ -1.57
LRRC28-212ENST00000558911 EZH1Q92800 747 aaPredicted RBP5.25□□□□□ -1.57
LRRC28-212ENST00000558911 SEMA6CQ9H3T2 930 aa5.25□□□□□ -1.57
LRRC28-212ENST00000558911 FAM105AQ9NUU6 356 aa5.25□□□□□ -1.57
LRRC28-212ENST00000558911 POLIQ9UNA4 740 aa5.25□□□□□ -1.57
LRRC28-212ENST00000558911 POLR3DP05423 398 aaPredicted RBP5.24□□□□□ -1.57
LRRC28-212ENST00000558911 CTSBP07858 339 aa5.24□□□□□ -1.57
LRRC28-212ENST00000558911 HMGB1P09429 215 aaKnown RBP5.24□□□□□ -1.57
LRRC28-212ENST00000558911 MZF1P28698 734 aaPredicted RBP5.24□□□□□ -1.57
LRRC28-212ENST00000558911 ASPAP45381 313 aa5.24□□□□□ -1.57
LRRC28-212ENST00000558911 CYP27A1Q02318 531 aa5.24□□□□□ -1.57
LRRC28-212ENST00000558911 SPRED2Q7Z698 418 aa5.24□□□□□ -1.57
LRRC28-212ENST00000558911 KSR1Q8IVT5 923 aa5.24□□□□□ -1.57
LRRC28-212ENST00000558911 BCL7CQ8WUZ0 217 aaPredicted RBP5.24□□□□□ -1.57
LRRC28-212ENST00000558911 CLP1Q92989 425 aaKnown RBP5.24□□□□□ -1.57
LRRC28-212ENST00000558911 SOX17Q9H6I2 414 aaPredicted RBP5.24□□□□□ -1.57
LRRC28-212ENST00000558911 IGSF5Q9NSI5 407 aa5.24□□□□□ -1.57
LRRC28-212ENST00000558911 SLAIN2Q9P270 581 aa5.24□□□□□ -1.57
LRRC28-212ENST00000558911 DBX1A6NMT0 343 aa5.23□□□□□ -1.57
LRRC28-212ENST00000558911 DYNC1LI2O43237 492 aaPredicted RBP5.23□□□□□ -1.57
LRRC28-212ENST00000558911 TNFRSF21O75509 655 aa5.23□□□□□ -1.57
LRRC28-212ENST00000558911 FARP2O94887 1054 aaPredicted RBP5.23□□□□□ -1.57
LRRC28-212ENST00000558911 EIF1AXP47813 144 aaKnown RBP5.23□□□□□ -1.57
LRRC28-212ENST00000558911 MTMR3Q13615 1198 aa5.23□□□□□ -1.57
LRRC28-212ENST00000558911 POU4F3Q15319 338 aa5.23□□□□□ -1.57
LRRC28-212ENST00000558911 FAM168AQ92567 244 aa5.23□□□□□ -1.57
LRRC28-212ENST00000558911 RC3H2Q9HBD1 1191 aaKnown RBP5.23□□□□□ -1.57
LRRC28-212ENST00000558911 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.23□□□□□ -1.57
LRRC28-212ENST00000558911 CARMIL2Q6F5E8 1435 aa5.23□□□□□ -1.57
LRRC28-212ENST00000558911 TTBK1Q5TCY1 1321 aaPredicted RBP5.23□□□□□ -1.57
LRRC28-212ENST00000558911 ECEL1O95672 775 aa5.22□□□□□ -1.57
LRRC28-212ENST00000558911 HSP90B1P14625 803 aaKnown RBP5.22□□□□□ -1.57
LRRC28-212ENST00000558911 CDK11BP21127 795 aaKnown RBP5.22□□□□□ -1.57
LRRC28-212ENST00000558911 CD96P40200 585 aa5.22□□□□□ -1.57
LRRC28-212ENST00000558911 PCDH1Q08174 1060 aa5.22□□□□□ -1.57
LRRC28-212ENST00000558911 FBLN7Q53RD9 439 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms