RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 NEDD9Q14511 834 aa15.71■□□□□ 0.11
SPG11-210ENST00000558319 FCHSD1Q86WN1 690 aa15.71■□□□□ 0.11
SPG11-210ENST00000558319 ARHGEF2Q92974 986 aaKnown RBP15.71■□□□□ 0.11
SPG11-210ENST00000558319 FAM184BQ9ULE4 1060 aa15.71■□□□□ 0.11
SPG11-210ENST00000558319 KCNG4Q8TDN1 519 aa15.71■□□□□ 0.11
SPG11-210ENST00000558319 NDUFB9Q9Y6M9 179 aa15.71■□□□□ 0.11
SPG11-210ENST00000558319 TXNDC9O14530 226 aa15.71■□□□□ 0.1
SPG11-210ENST00000558319 GBP1P32455 592 aa15.71■□□□□ 0.1
SPG11-210ENST00000558319 RAD51AP2Q09MP3 1159 aa15.71■□□□□ 0.1
SPG11-210ENST00000558319 IDI1Q13907 227 aa15.71■□□□□ 0.1
SPG11-210ENST00000558319 GKAP1Q5VSY0 366 aaPredicted RBP15.71■□□□□ 0.1
SPG11-210ENST00000558319 ZGPATQ8N5A5 531 aaKnown RBP15.71■□□□□ 0.1
SPG11-210ENST00000558319 RHPN1Q8TCX5 695 aa15.71■□□□□ 0.1
SPG11-210ENST00000558319 GRIN2BQ13224 1484 aa15.71■□□□□ 0.1
SPG11-210ENST00000558319 ZNF131P52739 623 aa15.7■□□□□ 0.1
SPG11-210ENST00000558319 TFCP2Q12800 502 aa15.7■□□□□ 0.1
SPG11-210ENST00000558319 TTC21AQ8NDW8 1320 aa15.7■□□□□ 0.1
SPG11-210ENST00000558319 LONRF3Q496Y0 759 aa15.7■□□□□ 0.1
SPG11-210ENST00000558319 B4GALNT4Q76KP1 1039 aa15.7■□□□□ 0.1
SPG11-210ENST00000558319 PARP3Q9Y6F1 533 aa15.7■□□□□ 0.1
SPG11-210ENST00000558319 POLA1P09884 1462 aaPredicted RBP15.7■□□□□ 0.1
SPG11-210ENST00000558319 CCT6AP40227 531 aaKnown RBP15.7■□□□□ 0.1
SPG11-210ENST00000558319 EPSTI1Q96J88 318 aa15.7■□□□□ 0.1
SPG11-210ENST00000558319 PYM1Q9BRP8 204 aaKnown RBP15.7■□□□□ 0.1
SPG11-210ENST00000558319 ATP2A1O14983 1001 aa15.7■□□□□ 0.1
SPG11-210ENST00000558319 GSTO1P78417 241 aa15.7■□□□□ 0.1
SPG11-210ENST00000558319 ZNF174Q15697 407 aa15.7■□□□□ 0.1
SPG11-210ENST00000558319 TBC1D7Q9P0N9 293 aa15.7■□□□□ 0.1
SPG11-210ENST00000558319 LUC7L2Q9Y383 392 aaKnown RBP15.7■□□□□ 0.1
SPG11-210ENST00000558319 CACNA2D3Q8IZS8 1091 aa15.7■□□□□ 0.1
SPG11-210ENST00000558319 NLRP3Q96P20 1036 aa15.7■□□□□ 0.1
SPG11-210ENST00000558319 TACO1Q9BSH4 297 aaKnown RBP15.7■□□□□ 0.1
SPG11-210ENST00000558319 EPRSP07814 1512 aaKnown RBP15.7■□□□□ 0.1
SPG11-210ENST00000558319 TCP10Q12799 353 aa15.69■□□□□ 0.1
SPG11-210ENST00000558319 SPDYE3A6NKU9 549 aa15.69■□□□□ 0.1
SPG11-210ENST00000558319 PNMA8AQ86V59 439 aaPredicted RBP15.69■□□□□ 0.1
SPG11-210ENST00000558319 MPHOSPH6Q99547 160 aaKnown RBP15.69■□□□□ 0.1
SPG11-210ENST00000558319 RBSNQ9H1K0 784 aa15.69■□□□□ 0.1
SPG11-210ENST00000558319 HFM1A2PYH4 1435 aa15.69■□□□□ 0.1
SPG11-210ENST00000558319 CCDC122Q5T0U0 273 aa15.69■□□□□ 0.1
SPG11-210ENST00000558319 C8orf58Q8NAV2 365 aa15.69■□□□□ 0.1
SPG11-210ENST00000558319 DDX17Q92841 729 aaKnown RBP15.69■□□□□ 0.1
SPG11-210ENST00000558319 CARD6Q9BX69 1037 aa15.69■□□□□ 0.1
SPG11-210ENST00000558319 NCKAP5LQ9HCH0 1330 aa15.69■□□□□ 0.1
SPG11-210ENST00000558319 GOLGA6CA6NDK9 693 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 PSMA7O14818 248 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 GOLGA6DP0CG33 693 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 MYCLP12524 364 aaPredicted RBP15.68■□□□□ 0.1
SPG11-210ENST00000558319 RNF34Q969K3 372 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 GOLGA6AQ9NYA3 693 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 NOS1P29475 1434 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 HSPA1LP34931 641 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 NUCB1Q02818 461 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 ZNF804AQ7Z570 1209 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 ARFGAP2Q8N6H7 521 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 LMBR1Q8WVP7 490 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 BAG1Q99933 345 aaPredicted RBP15.68■□□□□ 0.1
SPG11-210ENST00000558319 USH1GQ495M9 461 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 NEK11Q8NG66 645 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 ERMNQ8TAM6 284 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 ODF2LQ9ULJ1 636 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 FRMD3A2A2Y4 597 aa15.68■□□□□ 0.1
SPG11-210ENST00000558319 UTP14CQ5TAP6 766 aaKnown RBP15.68■□□□□ 0.1
SPG11-210ENST00000558319 MTRF1LQ9UGC7 380 aaKnown RBP15.68■□□□□ 0.1
SPG11-210ENST00000558319 ZNF853P0CG23 659 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 ERO1AQ96HE7 468 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 PAG1Q9NWQ8 432 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 TXNDC16Q9P2K2 825 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 STK38LQ9Y2H1 464 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 hCG_1642624A0A1W2PR95 340 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 IFT74Q96LB3 600 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.67■□□□□ 0.1
SPG11-210ENST00000558319 PRPHP41219 470 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 DDB1Q16531 1140 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 ESR2Q92731 530 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 PPANQ9NQ55 473 aaKnown RBP15.67■□□□□ 0.1
SPG11-210ENST00000558319 NKIRAS1Q9NYS0 192 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 MKRN1Q9UHC7 482 aaKnown RBP15.67■□□□□ 0.1
SPG11-210ENST00000558319 ATP6V0A2Q9Y487 856 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 CCDC169A6NNP5 214 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 CASQ2O14958 399 aaPredicted RBP15.67■□□□□ 0.1
SPG11-210ENST00000558319 GNPATO15228 680 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 KLHDC4Q8TBB5 520 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 RRP36Q96EU6 259 aaKnown RBP15.67■□□□□ 0.1
SPG11-210ENST00000558319 DDX27Q96GQ7 796 aaKnown RBP15.67■□□□□ 0.1
SPG11-210ENST00000558319 ANO3Q9BYT9 981 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 CTNND2Q9UQB3 1225 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 TTLL3Q9Y4R7 772 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 OAS2P29728 719 aaKnown RBP15.67■□□□□ 0.1
SPG11-210ENST00000558319 GEN1Q17RS7 908 aa15.67■□□□□ 0.1
SPG11-210ENST00000558319 ZC3H12CQ9C0D7 883 aaKnown RBP15.67■□□□□ 0.1
SPG11-210ENST00000558319 CERS3Q8IU89 383 aa15.66■□□□□ 0.1
SPG11-210ENST00000558319 FMNL3Q8IVF7 1028 aa15.66■□□□□ 0.1
SPG11-210ENST00000558319 TRIM31Q9BZY9 425 aa15.66■□□□□ 0.1
SPG11-210ENST00000558319 SPTLC2O15270 562 aa15.66■□□□□ 0.1
SPG11-210ENST00000558319 MYCP01106 439 aaPredicted RBP15.66■□□□□ 0.1
SPG11-210ENST00000558319 LETM2Q2VYF4 491 aa15.66■□□□□ 0.1
SPG11-210ENST00000558319 EAPPQ56P03 285 aaPredicted RBP15.66■□□□□ 0.1
SPG11-210ENST00000558319 TRIM68Q6AZZ1 485 aa15.66■□□□□ 0.1
SPG11-210ENST00000558319 TSC1Q92574 1164 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms