RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 NAA16Q6N069 864 aaPredicted RBP24.33■■□□□ 1.49
SNRPA1-205ENST00000558036 UPF1Q92900 1129 aaKnown RBP eCLIP24.33■■□□□ 1.49
SNRPA1-205ENST00000558036 NSUN4Q96CB9 384 aaKnown RBP24.33■■□□□ 1.49
SNRPA1-205ENST00000558036 TMX4Q9H1E5 349 aaPredicted RBP24.33■■□□□ 1.49
SNRPA1-205ENST00000558036 PDRG1Q9NUG6 133 aa24.33■■□□□ 1.49
SNRPA1-205ENST00000558036 CACNA1SQ13698 1873 aa24.33■■□□□ 1.48
SNRPA1-205ENST00000558036 C10orf71Q711Q0 1435 aa24.32■■□□□ 1.48
SNRPA1-205ENST00000558036 PSMA5P28066 241 aa24.32■■□□□ 1.48
SNRPA1-205ENST00000558036 GRIK5Q16478 980 aa24.32■■□□□ 1.48
SNRPA1-205ENST00000558036 BLOC1S2Q6QNY1 142 aa24.32■■□□□ 1.48
SNRPA1-205ENST00000558036 MYH13Q9UKX3 1938 aa24.31■■□□□ 1.48
SNRPA1-205ENST00000558036 NEK1Q96PY6 1258 aa24.31■■□□□ 1.48
SNRPA1-205ENST00000558036 IL1R1P14778 569 aa24.31■■□□□ 1.48
SNRPA1-205ENST00000558036 MCM2P49736 904 aa24.31■■□□□ 1.48
SNRPA1-205ENST00000558036 KRT32Q14532 448 aa24.31■■□□□ 1.48
SNRPA1-205ENST00000558036 CTNNA3Q9UI47 895 aa24.31■■□□□ 1.48
SNRPA1-205ENST00000558036 RPS6KB1P23443 525 aa24.3■■□□□ 1.48
SNRPA1-205ENST00000558036 WDR66Q8TBY9 1149 aa24.3■■□□□ 1.48
SNRPA1-205ENST00000558036 CNKSR1Q969H4 720 aa24.3■■□□□ 1.48
SNRPA1-205ENST00000558036 EPB41L4AQ9HCS5 686 aaPredicted RBP24.3■■□□□ 1.48
SNRPA1-205ENST00000558036 SLX4Q8IY92 1834 aa24.3■■□□□ 1.48
SNRPA1-205ENST00000558036 E7EWF7 191 aa24.29■■□□□ 1.48
SNRPA1-205ENST00000558036 DYNLL1P63167 89 aaKnown RBP24.29■■□□□ 1.48
SNRPA1-205ENST00000558036 IMMTQ16891 758 aaKnown RBP24.29■■□□□ 1.48
SNRPA1-205ENST00000558036 ZC3H12CQ9C0D7 883 aaKnown RBP24.29■■□□□ 1.48
SNRPA1-205ENST00000558036 MAGEB6P1A0A0J9YX57 407 aa24.29■■□□□ 1.48
SNRPA1-205ENST00000558036 DOK7Q18PE1 504 aa24.29■■□□□ 1.48
SNRPA1-205ENST00000558036 SLC4A4Q9Y6R1 1079 aa24.29■■□□□ 1.48
SNRPA1-205ENST00000558036 GSG1L2A8MUP6 293 aa24.28■■□□□ 1.48
SNRPA1-205ENST00000558036 DZIP1Q86YF9 867 aaKnown RBP24.28■■□□□ 1.48
SNRPA1-205ENST00000558036 ZGPATQ8N5A5 531 aaKnown RBP24.28■■□□□ 1.48
SNRPA1-205ENST00000558036 PATL2C9JE40 543 aaKnown RBP24.28■■□□□ 1.48
SNRPA1-205ENST00000558036 RIOK1Q9BRS2 568 aaKnown RBP24.28■■□□□ 1.48
SNRPA1-205ENST00000558036 SALL1Q9NSC2 1324 aa24.27■■□□□ 1.48
SNRPA1-205ENST00000558036 ZNF213O14771 459 aa24.27■■□□□ 1.48
SNRPA1-205ENST00000558036 ZBTB22O15209 634 aa24.27■■□□□ 1.48
SNRPA1-205ENST00000558036 LDHBP07195 334 aaKnown RBP24.27■■□□□ 1.48
SNRPA1-205ENST00000558036 DDIT3P35638 169 aa24.27■■□□□ 1.48
SNRPA1-205ENST00000558036 IFNL3Q8IZI9 196 aa24.27■■□□□ 1.48
SNRPA1-205ENST00000558036 SDR42E1Q8WUS8 393 aa24.27■■□□□ 1.48
SNRPA1-205ENST00000558036 PSDA5PKW4 1024 aaPredicted RBP24.26■■□□□ 1.47
SNRPA1-205ENST00000558036 DPEP1P16444 411 aa24.26■■□□□ 1.47
SNRPA1-205ENST00000558036 C7orf43Q8WVR3 580 aa24.26■■□□□ 1.47
SNRPA1-205ENST00000558036 LRRC2Q9BYS8 371 aa24.26■■□□□ 1.47
SNRPA1-205ENST00000558036 NBPF3Q9H094 633 aa24.26■■□□□ 1.47
SNRPA1-205ENST00000558036 SRCAPQ6ZRS2 3230 aa24.26■■□□□ 1.47
SNRPA1-205ENST00000558036 C21orf2O43822 256 aa24.26■■□□□ 1.47
SNRPA1-205ENST00000558036 LARGE1O95461 756 aa24.26■■□□□ 1.47
SNRPA1-205ENST00000558036 DIXDC1Q155Q3 683 aa24.26■■□□□ 1.47
SNRPA1-205ENST00000558036 SPTY2D1Q68D10 685 aaPredicted RBP24.26■■□□□ 1.47
SNRPA1-205ENST00000558036 AATFQ9NY61 560 aaKnown RBP eCLIP24.26■■□□□ 1.47
SNRPA1-205ENST00000558036 LIMCH1Q9UPQ0 1083 aa24.26■■□□□ 1.47
SNRPA1-205ENST00000558036 MTFR1LQ9H019 292 aa24.25■■□□□ 1.47
SNRPA1-205ENST00000558036 NAPBQ9H115 298 aa24.25■■□□□ 1.47
SNRPA1-205ENST00000558036 KCNA3P22001 575 aa24.25■■□□□ 1.47
SNRPA1-205ENST00000558036 GTF2IP78347 998 aa24.25■■□□□ 1.47
SNRPA1-205ENST00000558036 CHST3Q7LGC8 479 aa24.25■■□□□ 1.47
SNRPA1-205ENST00000558036 FBXW7Q969H0 707 aa24.25■■□□□ 1.47
SNRPA1-205ENST00000558036 COA1Q9GZY4 146 aa24.25■■□□□ 1.47
SNRPA1-205ENST00000558036 UTRNP46939 3433 aa24.24■■□□□ 1.47
SNRPA1-205ENST00000558036 MFSD14BQ5SR56 506 aa24.24■■□□□ 1.47
SNRPA1-205ENST00000558036 GNAT2P19087 354 aa24.23■■□□□ 1.47
SNRPA1-205ENST00000558036 TOB2Q14106 344 aaPredicted RBP24.23■■□□□ 1.47
SNRPA1-205ENST00000558036 TBC1D10CQ8IV04 446 aa24.23■■□□□ 1.47
SNRPA1-205ENST00000558036 TDO2P48775 406 aa24.23■■□□□ 1.47
SNRPA1-205ENST00000558036 TTLL6Q8N841 843 aa24.23■■□□□ 1.47
SNRPA1-205ENST00000558036 DBNDD1Q9H9R9 158 aa24.23■■□□□ 1.47
SNRPA1-205ENST00000558036 TPCN1Q9ULQ1 816 aa24.23■■□□□ 1.47
SNRPA1-205ENST00000558036 CUL4AQ13619 759 aa24.22■■□□□ 1.47
SNRPA1-205ENST00000558036 ALX1Q15699 326 aa24.22■■□□□ 1.47
SNRPA1-205ENST00000558036 IL27Q8NEV9 243 aa24.22■■□□□ 1.47
SNRPA1-205ENST00000558036 CHMP5Q9NZZ3 219 aa24.22■■□□□ 1.47
SNRPA1-205ENST00000558036 PPP1R1BQ9UD71 204 aaPredicted RBP24.22■■□□□ 1.47
SNRPA1-205ENST00000558036 G3V3G9 751 aa24.22■■□□□ 1.47
SNRPA1-205ENST00000558036 DTNBO60941 627 aa24.22■■□□□ 1.47
SNRPA1-205ENST00000558036 POLD1P28340 1107 aa24.22■■□□□ 1.47
SNRPA1-205ENST00000558036 DCAF8Q5TAQ9 597 aa24.22■■□□□ 1.47
SNRPA1-205ENST00000558036 Q6ZUG5 572 aa24.22■■□□□ 1.47
SNRPA1-205ENST00000558036 EYA3Q99504 573 aa24.22■■□□□ 1.47
SNRPA1-205ENST00000558036 MXD3Q9BW11 206 aa24.22■■□□□ 1.47
SNRPA1-205ENST00000558036 INCENPQ9NQS7 918 aa24.22■■□□□ 1.47
SNRPA1-205ENST00000558036 KCNQ5Q9NR82 932 aa24.22■■□□□ 1.47
SNRPA1-205ENST00000558036 DHX32Q7L7V1 743 aaKnown RBP24.21■■□□□ 1.47
SNRPA1-205ENST00000558036 NKX2-3Q8TAU0 364 aa24.21■■□□□ 1.47
SNRPA1-205ENST00000558036 NACAP1Q9BZK3 213 aa24.21■■□□□ 1.47
SNRPA1-205ENST00000558036 CTDSPL2Q05D32 466 aa24.2■■□□□ 1.47
SNRPA1-205ENST00000558036 ME3Q16798 604 aa24.2■■□□□ 1.47
SNRPA1-205ENST00000558036 STK11IPQ8N1F8 1099 aa24.2■■□□□ 1.47
SNRPA1-205ENST00000558036 HMGB1P09429 215 aaKnown RBP24.2■■□□□ 1.46
SNRPA1-205ENST00000558036 NBR1Q14596 966 aa24.2■■□□□ 1.46
SNRPA1-205ENST00000558036 SMIM22K7EJ46 135 aa24.19■■□□□ 1.46
SNRPA1-205ENST00000558036 NECAB1Q8N987 351 aa24.19■■□□□ 1.46
SNRPA1-205ENST00000558036 ZMYM6O95789 1325 aa24.19■■□□□ 1.46
SNRPA1-205ENST00000558036 FAM205AQ6ZU69 1335 aa24.19■■□□□ 1.46
SNRPA1-205ENST00000558036 SNED1Q8TER0 1413 aa24.19■■□□□ 1.46
SNRPA1-205ENST00000558036 FGD1P98174 961 aa24.19■■□□□ 1.46
SNRPA1-205ENST00000558036 EXOSC10Q01780 885 aaKnown RBP24.19■■□□□ 1.46
SNRPA1-205ENST00000558036 AOC3Q16853 763 aa24.19■■□□□ 1.46
SNRPA1-205ENST00000558036 KLHL34Q8N239 644 aa24.19■■□□□ 1.46
SNRPA1-205ENST00000558036 RTFDC1Q9BY42 306 aaPredicted RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms