RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 TM6SF1Q9BZW5 370 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 BCL11AQ9H165 835 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 ATP8A2Q9NTI2 1148 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 RAI14Q9P0K7 980 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 ZNRF3Q9ULT6 936 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 TCRBV5S4A2TA0A5A2 114 aa12.57□□□□□ -0.4
GABRB3-213ENST00000557765 PPIP5K2O43314 1243 aa12.57□□□□□ -0.4
GABRB3-213ENST00000557765 IARSP41252 1262 aaKnown RBP12.57□□□□□ -0.4
GABRB3-213ENST00000557765 TNIP1Q15025 636 aa12.57□□□□□ -0.4
GABRB3-213ENST00000557765 RABEP1Q15276 862 aa12.57□□□□□ -0.4
GABRB3-213ENST00000557765 MFSD14BQ5SR56 506 aa12.57□□□□□ -0.4
GABRB3-213ENST00000557765 NIM1KQ8IY84 436 aa12.57□□□□□ -0.4
GABRB3-213ENST00000557765 MTA3Q9BTC8 594 aa12.57□□□□□ -0.4
GABRB3-213ENST00000557765 ABCF2Q9UG63 623 aa12.57□□□□□ -0.4
GABRB3-213ENST00000557765 SERPINA10Q9UK55 444 aa12.57□□□□□ -0.4
GABRB3-213ENST00000557765 ZNF532Q9HCE3 1301 aa12.57□□□□□ -0.4
GABRB3-213ENST00000557765 FER1L6Q2WGJ9 1857 aa12.57□□□□□ -0.4
GABRB3-213ENST00000557765 PATL2C9JE40 543 aaKnown RBP12.56□□□□□ -0.4
GABRB3-213ENST00000557765 ECE2O60344 883 aa12.56□□□□□ -0.4
GABRB3-213ENST00000557765 GRIN3BO60391 1043 aa12.56□□□□□ -0.4
GABRB3-213ENST00000557765 TXNRD3Q86VQ6 643 aa12.56□□□□□ -0.4
GABRB3-213ENST00000557765 AMOTL1Q8IY63 956 aa12.56□□□□□ -0.4
GABRB3-213ENST00000557765 LARGE2Q8N3Y3 721 aa12.56□□□□□ -0.4
GABRB3-213ENST00000557765 LSG1Q9H089 658 aaKnown RBP12.56□□□□□ -0.4
GABRB3-213ENST00000557765 ANTXR1Q9H6X2 564 aa12.56□□□□□ -0.4
GABRB3-213ENST00000557765 PIH1D3Q9NQM4 214 aaKnown RBP12.56□□□□□ -0.4
GABRB3-213ENST00000557765 HDAC9Q9UKV0 1011 aa12.56□□□□□ -0.4
GABRB3-213ENST00000557765 GAKO14976 1311 aa12.56□□□□□ -0.4
GABRB3-213ENST00000557765 A0A0D9SFI3 127 aa12.55□□□□□ -0.4
GABRB3-213ENST00000557765 GPAA1O43292 621 aa12.55□□□□□ -0.4
GABRB3-213ENST00000557765 BECN1Q14457 450 aa12.55□□□□□ -0.4
GABRB3-213ENST00000557765 NECTIN1Q15223 517 aa12.55□□□□□ -0.4
GABRB3-213ENST00000557765 IMMTQ16891 758 aaKnown RBP12.55□□□□□ -0.4
GABRB3-213ENST00000557765 MAGEB6Q8N7X4 407 aa12.55□□□□□ -0.4
GABRB3-213ENST00000557765 SYT17Q9BSW7 474 aa12.55□□□□□ -0.4
GABRB3-213ENST00000557765 CRNKL1Q9BZJ0 848 aaKnown RBP12.55□□□□□ -0.4
GABRB3-213ENST00000557765 ZNF287Q9HBT7 754 aa12.55□□□□□ -0.4
GABRB3-213ENST00000557765 PSME4Q14997 1843 aa12.55□□□□□ -0.4
GABRB3-213ENST00000557765 COL1A1P02452 1464 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-213ENST00000557765 GPR75-ASB3A0A0A6YYF3 556 aa12.54□□□□□ -0.4
GABRB3-213ENST00000557765 MAGEB6P1A0A0J9YX57 407 aa12.54□□□□□ -0.4
GABRB3-213ENST00000557765 SNAP23O00161 211 aa12.54□□□□□ -0.4
GABRB3-213ENST00000557765 ST18O60284 1047 aa12.54□□□□□ -0.4
GABRB3-213ENST00000557765 SLC3A2P08195 630 aaKnown RBP12.54□□□□□ -0.4
GABRB3-213ENST00000557765 VIL1P09327 827 aaKnown RBP12.54□□□□□ -0.4
GABRB3-213ENST00000557765 HSPD1P10809 573 aaKnown RBP12.54□□□□□ -0.4
GABRB3-213ENST00000557765 LMNB1P20700 586 aa12.54□□□□□ -0.4
GABRB3-213ENST00000557765 CYP7A1P22680 504 aa12.54□□□□□ -0.4
GABRB3-213ENST00000557765 MECOMQ03112 1051 aa12.54□□□□□ -0.4
GABRB3-213ENST00000557765 OGFOD1Q8N543 542 aa12.54□□□□□ -0.4
GABRB3-213ENST00000557765 FAM227BQ96M60 508 aa12.54□□□□□ -0.4
GABRB3-213ENST00000557765 STRBPQ96SI9 672 aaKnown RBP12.54□□□□□ -0.4
GABRB3-213ENST00000557765 FHDC1Q9C0D6 1143 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-213ENST00000557765 RNF41Q9H4P4 317 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-213ENST00000557765 TSHZ2Q9NRE2 1034 aa12.54□□□□□ -0.4
GABRB3-213ENST00000557765 BCS1LQ9Y276 419 aa12.54□□□□□ -0.4
GABRB3-213ENST00000557765 CACNA1SQ13698 1873 aa12.54□□□□□ -0.4
GABRB3-213ENST00000557765 MROH7-TTC4A0A0A0MT08 1334 aa12.54□□□□□ -0.4
GABRB3-213ENST00000557765 WDR19Q8NEZ3 1342 aa12.54□□□□□ -0.4
GABRB3-213ENST00000557765 PDIA4P13667 645 aaKnown RBP12.53□□□□□ -0.4
GABRB3-213ENST00000557765 KLRK1P26718 216 aa12.53□□□□□ -0.4
GABRB3-213ENST00000557765 GTF2IP78347 998 aa12.53□□□□□ -0.4
GABRB3-213ENST00000557765 ANKRD1Q15327 319 aa12.53□□□□□ -0.4
GABRB3-213ENST00000557765 DACT2Q5SW24 774 aa12.53□□□□□ -0.4
GABRB3-213ENST00000557765 FKBP1CQ5VVH2 108 aa12.53□□□□□ -0.4
GABRB3-213ENST00000557765 FBXL16Q8N461 479 aa12.53□□□□□ -0.4
GABRB3-213ENST00000557765 MTMR14Q8NCE2 650 aa12.53□□□□□ -0.4
GABRB3-213ENST00000557765 DPF2Q92785 391 aa12.53□□□□□ -0.4
GABRB3-213ENST00000557765 OSBP2Q969R2 916 aa12.53□□□□□ -0.4
GABRB3-213ENST00000557765 SNX21Q969T3 373 aa12.53□□□□□ -0.4
GABRB3-213ENST00000557765 TEKT1Q969V4 418 aa12.53□□□□□ -0.4
GABRB3-213ENST00000557765 ALDH8A1Q9H2A2 487 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-213ENST00000557765 CNNM2Q9H8M5 875 aa12.53□□□□□ -0.4
GABRB3-213ENST00000557765 ARPP21Q9UBL0 812 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-213ENST00000557765 RBM19Q9Y4C8 960 aaKnown RBP12.53□□□□□ -0.4
GABRB3-213ENST00000557765 RIMBP2O15034 1052 aa12.52□□□□□ -0.41
GABRB3-213ENST00000557765 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.41
GABRB3-213ENST00000557765 CHAF1AQ13111 956 aaPredicted RBP12.52□□□□□ -0.41
GABRB3-213ENST00000557765 AOC3Q16853 763 aa12.52□□□□□ -0.41
GABRB3-213ENST00000557765 SBK1Q52WX2 424 aa12.52□□□□□ -0.41
GABRB3-213ENST00000557765 PI16Q6UXB8 463 aa12.52□□□□□ -0.41
GABRB3-213ENST00000557765 EDC3Q96F86 508 aaKnown RBP12.52□□□□□ -0.41
GABRB3-213ENST00000557765 ZDHHC15Q96MV8 337 aa12.52□□□□□ -0.41
GABRB3-213ENST00000557765 RIOK1Q9BRS2 568 aaKnown RBP12.52□□□□□ -0.41
GABRB3-213ENST00000557765 ANAPC4Q9UJX5 808 aa12.52□□□□□ -0.41
GABRB3-213ENST00000557765 FZD9O00144 591 aa12.51□□□□□ -0.41
GABRB3-213ENST00000557765 SEC24BO95487 1268 aa12.51□□□□□ -0.41
GABRB3-213ENST00000557765 PRDX5P30044 214 aa12.51□□□□□ -0.41
GABRB3-213ENST00000557765 TRDNQ13061 729 aa12.51□□□□□ -0.41
GABRB3-213ENST00000557765 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
GABRB3-213ENST00000557765 CIAPIN1Q6FI81 312 aa12.51□□□□□ -0.41
GABRB3-213ENST00000557765 RSBN1LQ6PCB5 846 aaPredicted RBP12.51□□□□□ -0.41
GABRB3-213ENST00000557765 PUS7LQ9H0K6 701 aaKnown RBP12.51□□□□□ -0.41
GABRB3-213ENST00000557765 NAPBQ9H115 298 aa12.51□□□□□ -0.41
GABRB3-213ENST00000557765 WWC3Q9ULE0 1092 aa12.51□□□□□ -0.41
GABRB3-213ENST00000557765 RBM8AQ9Y5S9 174 aaKnown RBP12.51□□□□□ -0.41
GABRB3-213ENST00000557765 COL2A1P02458 1487 aaPredicted RBP12.51□□□□□ -0.41
GABRB3-213ENST00000557765 NFKBIEO00221 500 aa12.5□□□□□ -0.41
GABRB3-213ENST00000557765 ZNF213O14771 459 aa12.5□□□□□ -0.41
GABRB3-213ENST00000557765 CCDC178Q5BJE1 867 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms