RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 NBPF9Q3BBW0 867 aa12.98□□□□□ -0.33
HNRNPC-232ENST00000557442 CFAP100Q494V2 611 aa12.98□□□□□ -0.33
HNRNPC-232ENST00000557442 PI16Q6UXB8 463 aa12.98□□□□□ -0.33
HNRNPC-232ENST00000557442 SPATA5Q8NB90 893 aa12.98□□□□□ -0.33
HNRNPC-232ENST00000557442 DCPSQ96C86 337 aaKnown RBP12.98□□□□□ -0.33
HNRNPC-232ENST00000557442 LRRCC1Q9C099 1032 aa12.98□□□□□ -0.33
HNRNPC-232ENST00000557442 PGAP2Q9UHJ9 254 aa12.98□□□□□ -0.33
HNRNPC-232ENST00000557442 PASKQ96RG2 1323 aa12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 ZBTB22O15209 634 aa12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 ITGBL1O95965 494 aaPredicted RBP12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 IFIT2P09913 472 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 PRDX5P30044 214 aa12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 MCAMP43121 646 aa12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 ANGEL2Q5VTE6 544 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 ZGPATQ8N5A5 531 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 GLIS2Q9BZE0 524 aaPredicted RBP12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 DCTPP1Q9H773 170 aa12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 HMG20BQ9P0W2 317 aa12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 ABCF2Q9UG63 623 aa12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 SERPINA10Q9UK55 444 aa12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 SUGT1Q9Y2Z0 365 aa12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 PCDHAC2Q9Y5I4 1007 aa12.97□□□□□ -0.33
HNRNPC-232ENST00000557442 OTOFQ9HC10 1997 aa12.96□□□□□ -0.33
HNRNPC-232ENST00000557442 PITPNM2Q9BZ72 1349 aa12.96□□□□□ -0.33
HNRNPC-232ENST00000557442 SPDYE2BA6NHP3 402 aa12.96□□□□□ -0.33
HNRNPC-232ENST00000557442 TRAF5O00463 557 aa12.96□□□□□ -0.33
HNRNPC-232ENST00000557442 MYO1BO43795 1136 aa12.96□□□□□ -0.33
HNRNPC-232ENST00000557442 SMARCA5O60264 1052 aaPredicted RBP12.96□□□□□ -0.33
HNRNPC-232ENST00000557442 LDHBP07195 334 aaKnown RBP12.96□□□□□ -0.33
HNRNPC-232ENST00000557442 SPDYE6P0CI01 402 aa12.96□□□□□ -0.33
HNRNPC-232ENST00000557442 CRKP46108 304 aa12.96□□□□□ -0.33
HNRNPC-232ENST00000557442 CDC37L1Q7L3B6 337 aa12.96□□□□□ -0.33
HNRNPC-232ENST00000557442 KRT26Q7Z3Y9 468 aa12.96□□□□□ -0.33
HNRNPC-232ENST00000557442 SULF1Q8IWU6 871 aa12.96□□□□□ -0.33
HNRNPC-232ENST00000557442 MTMR14Q8NCE2 650 aa12.96□□□□□ -0.33
HNRNPC-232ENST00000557442 TEKT1Q969V4 418 aa12.96□□□□□ -0.33
HNRNPC-232ENST00000557442 PAPPA2Q9BXP8 1791 aa12.95□□□□□ -0.34
HNRNPC-232ENST00000557442 ADM5C9JUS6 153 aa12.95□□□□□ -0.34
HNRNPC-232ENST00000557442 APLP1P51693 650 aa12.95□□□□□ -0.34
HNRNPC-232ENST00000557442 HDAC1Q13547 482 aaPredicted RBP12.95□□□□□ -0.34
HNRNPC-232ENST00000557442 DZIP1Q86YF9 867 aaKnown RBP12.95□□□□□ -0.34
HNRNPC-232ENST00000557442 ZBED3Q96IU2 234 aaPredicted RBP12.95□□□□□ -0.34
HNRNPC-232ENST00000557442 SNRKQ9NRH2 765 aa12.95□□□□□ -0.34
HNRNPC-232ENST00000557442 MYH1P12882 1939 aa12.95□□□□□ -0.34
HNRNPC-232ENST00000557442 CLRN2A0PK11 232 aa12.94□□□□□ -0.34
HNRNPC-232ENST00000557442 HDLBPQ00341 1268 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-232ENST00000557442 FMR1Q06787 632 aaKnown RBP eCLIP12.94□□□□□ -0.34
HNRNPC-232ENST00000557442 DIXDC1Q155Q3 683 aa12.94□□□□□ -0.34
HNRNPC-232ENST00000557442 SPTY2D1Q68D10 685 aaPredicted RBP12.94□□□□□ -0.34
HNRNPC-232ENST00000557442 USP48Q86UV5 1035 aa12.94□□□□□ -0.34
HNRNPC-232ENST00000557442 APOBEC3FQ8IUX4 373 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-232ENST00000557442 ZNF512BQ96KM6 892 aaPredicted RBP12.94□□□□□ -0.34
HNRNPC-232ENST00000557442 PRMT6Q96LA8 375 aaPredicted RBP12.94□□□□□ -0.34
HNRNPC-232ENST00000557442 ZNF408Q9H9D4 720 aa12.94□□□□□ -0.34
HNRNPC-232ENST00000557442 SCAF8Q9UPN6 1271 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-232ENST00000557442 NAV1Q8NEY1 1877 aa12.94□□□□□ -0.34
HNRNPC-232ENST00000557442 AOX1Q06278 1338 aa12.94□□□□□ -0.34
HNRNPC-232ENST00000557442 TBC1D9Q6ZT07 1266 aa12.93□□□□□ -0.34
HNRNPC-232ENST00000557442 ERICH6Q7L0X2 663 aa12.93□□□□□ -0.34
HNRNPC-232ENST00000557442 VEZTQ9HBM0 779 aa12.93□□□□□ -0.34
HNRNPC-232ENST00000557442 MYH8P13535 1937 aa12.93□□□□□ -0.34
HNRNPC-232ENST00000557442 ZAP70P43403 619 aa12.92□□□□□ -0.34
HNRNPC-232ENST00000557442 HTRA3P83110 453 aa12.92□□□□□ -0.34
HNRNPC-232ENST00000557442 HHIPL2Q6UWX4 724 aa12.92□□□□□ -0.34
HNRNPC-232ENST00000557442 DLK2Q6UY11 383 aa12.92□□□□□ -0.34
HNRNPC-232ENST00000557442 GCC1Q96CN9 775 aa12.92□□□□□ -0.34
HNRNPC-232ENST00000557442 ZDHHC15Q96MV8 337 aa12.92□□□□□ -0.34
HNRNPC-232ENST00000557442 RWDD1Q9H446 243 aaPredicted RBP12.92□□□□□ -0.34
HNRNPC-232ENST00000557442 TDRD3Q9H7E2 651 aaKnown RBP12.92□□□□□ -0.34
HNRNPC-232ENST00000557442 RAI14Q9P0K7 980 aa12.92□□□□□ -0.34
HNRNPC-232ENST00000557442 LRP2BPQ9P2M1 347 aa12.92□□□□□ -0.34
HNRNPC-232ENST00000557442 ZBTB47Q9UFB7 747 aaPredicted RBP12.92□□□□□ -0.34
HNRNPC-232ENST00000557442 DAGLAQ9Y4D2 1042 aa12.92□□□□□ -0.34
HNRNPC-232ENST00000557442 NDUFB9Q9Y6M9 179 aa12.92□□□□□ -0.34
HNRNPC-232ENST00000557442 ATAD5Q96QE3 1844 aa12.91□□□□□ -0.34
HNRNPC-232ENST00000557442 TMEM88BA6NKF7 163 aa12.91□□□□□ -0.34
HNRNPC-232ENST00000557442 CELF2O95319 508 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-232ENST00000557442 CYP2E1P05181 493 aaPredicted RBP12.91□□□□□ -0.34
HNRNPC-232ENST00000557442 MECOMQ03112 1051 aa12.91□□□□□ -0.34
HNRNPC-232ENST00000557442 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
HNRNPC-232ENST00000557442 SLF2Q8IX21 1173 aa12.91□□□□□ -0.34
HNRNPC-232ENST00000557442 CDCA5Q96FF9 252 aa12.91□□□□□ -0.34
HNRNPC-232ENST00000557442 GPATCH3Q96I76 525 aa12.91□□□□□ -0.34
HNRNPC-232ENST00000557442 MRIQ9BWK5 157 aa12.91□□□□□ -0.34
HNRNPC-232ENST00000557442 CREBZFQ9NS37 354 aa12.91□□□□□ -0.34
HNRNPC-232ENST00000557442 ZNF70Q9UC06 446 aaPredicted RBP12.91□□□□□ -0.34
HNRNPC-232ENST00000557442 BAZ2AQ9UIF9 1905 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-232ENST00000557442 CENPBP07199 599 aaPredicted RBP12.9□□□□□ -0.34
HNRNPC-232ENST00000557442 DNAJC2Q99543 621 aaKnown RBP12.9□□□□□ -0.34
HNRNPC-232ENST00000557442 PIH1D3Q9NQM4 214 aaKnown RBP12.9□□□□□ -0.34
HNRNPC-232ENST00000557442 TMOD2Q9NZR1 351 aa12.9□□□□□ -0.34
HNRNPC-232ENST00000557442 PCNTO95613 3336 aa12.9□□□□□ -0.34
HNRNPC-232ENST00000557442 MROH7-TTC4A0A0A0MT08 1334 aa12.9□□□□□ -0.34
HNRNPC-232ENST00000557442 GAKO14976 1311 aa12.9□□□□□ -0.34
HNRNPC-232ENST00000557442 IDH1O75874 414 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-232ENST00000557442 CACNB3P54284 484 aa12.89□□□□□ -0.35
HNRNPC-232ENST00000557442 GSTO1P78417 241 aa12.89□□□□□ -0.35
HNRNPC-232ENST00000557442 TNFAIP1Q13829 316 aa12.89□□□□□ -0.35
HNRNPC-232ENST00000557442 ANKRD45Q5TZF3 282 aa12.89□□□□□ -0.35
HNRNPC-232ENST00000557442 CST9Q5W186 159 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms