RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 XAGE2Q96GT9 111 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 ZNF594Q96JF6 807 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-247ENST00000557311 DCAF5Q96JK2 942 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 UCN2Q96RP3 112 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 TIMMDC1Q9NPL8 285 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 PODXL2Q9NZ53 605 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 RNF181Q9P0P0 153 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 MKRN1Q9UHC7 482 aaKnown RBP6.74□□□□□ -1.33
ATXN3-247ENST00000557311 ASAP1Q9ULH1 1129 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 SMG6Q86US8 1419 aaKnown RBP6.74□□□□□ -1.33
ATXN3-247ENST00000557311 KAT6BQ8WYB5 2073 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 PXDNLA1KZ92 1463 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 RTL1A6NKG5 1358 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 INHAP05111 366 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 SLURP2P0DP57 97 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 GYS1P13807 737 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 VEGFAP15692 232 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-247ENST00000557311 RASA1P20936 1047 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 RFX1P22670 979 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 LMOD1P29536 600 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-247ENST00000557311 NBPF10Q6P3W6 841 aaKnown RBP6.73□□□□□ -1.33
ATXN3-247ENST00000557311 NBPF15Q8N660 670 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 TPCN2Q8NHX9 752 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 UBE2Q2Q8WVN8 375 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 AIDAQ96BJ3 306 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 GRIP2Q9C0E4 1043 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 ATG3Q9NT62 314 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 DNAAF2Q9NVR5 837 aaKnown RBP6.73□□□□□ -1.33
ATXN3-247ENST00000557311 LY75O60449 1722 aa6.73□□□□□ -1.33
ATXN3-247ENST00000557311 INSRP06213 1382 aa6.72□□□□□ -1.33
ATXN3-247ENST00000557311 PALM3A6NDB9 673 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-247ENST00000557311 BACH1O14867 736 aa6.72□□□□□ -1.33
ATXN3-247ENST00000557311 RPS6KA4O75676 772 aa6.72□□□□□ -1.33
ATXN3-247ENST00000557311 IFNL2Q8IZJ0 200 aa6.72□□□□□ -1.33
ATXN3-247ENST00000557311 OGFOD1Q8N543 542 aa6.72□□□□□ -1.33
ATXN3-247ENST00000557311 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.72□□□□□ -1.33
ATXN3-247ENST00000557311 PPP1R12CQ9BZL4 782 aa6.72□□□□□ -1.33
ATXN3-247ENST00000557311 GGNBP2Q9H3C7 697 aa6.72□□□□□ -1.33
ATXN3-247ENST00000557311 GPAMQ9HCL2 828 aa6.72□□□□□ -1.33
ATXN3-247ENST00000557311 CUEDC1Q9NWM3 386 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-247ENST00000557311 KIF24Q5T7B8 1368 aa6.71□□□□□ -1.33
ATXN3-247ENST00000557311 C10orf71Q711Q0 1435 aa6.71□□□□□ -1.34
ATXN3-247ENST00000557311 GLTPD2A6NH11 291 aa6.71□□□□□ -1.34
ATXN3-247ENST00000557311 PLA2G4AP47712 749 aa6.71□□□□□ -1.34
ATXN3-247ENST00000557311 SCNN1DP51172 638 aa6.71□□□□□ -1.34
ATXN3-247ENST00000557311 FOXR1Q6PIV2 292 aa6.71□□□□□ -1.34
ATXN3-247ENST00000557311 SV2AQ7L0J3 742 aa6.71□□□□□ -1.34
ATXN3-247ENST00000557311 PLEKHM2Q8IWE5 1019 aa6.71□□□□□ -1.34
ATXN3-247ENST00000557311 PGBD3Q8N328 593 aa6.71□□□□□ -1.34
ATXN3-247ENST00000557311 SVOPQ8N4V2 548 aa6.71□□□□□ -1.34
ATXN3-247ENST00000557311 CCDC97Q96F63 343 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-247ENST00000557311 PCDHGA11Q9Y5H2 935 aa6.71□□□□□ -1.34
ATXN3-247ENST00000557311 MAFBQ9Y5Q3 323 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-247ENST00000557311 CICQ96RK0 1608 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-247ENST00000557311 ERVV-2B6SEH9 535 aa6.7□□□□□ -1.34
ATXN3-247ENST00000557311 PHKG2P15735 406 aa6.7□□□□□ -1.34
ATXN3-247ENST00000557311 LMNB1P20700 586 aa6.7□□□□□ -1.34
ATXN3-247ENST00000557311 SMTNP53814 917 aa6.7□□□□□ -1.34
ATXN3-247ENST00000557311 CDCA8Q53HL2 280 aa6.7□□□□□ -1.34
ATXN3-247ENST00000557311 CCDC102BQ68D86 513 aa6.7□□□□□ -1.34
ATXN3-247ENST00000557311 SLC4A9Q96Q91 983 aa6.7□□□□□ -1.34
ATXN3-247ENST00000557311 TESK2Q96S53 571 aa6.7□□□□□ -1.34
ATXN3-247ENST00000557311 VRTNQ9H8Y1 702 aa6.7□□□□□ -1.34
ATXN3-247ENST00000557311 FLT4P35916 1363 aa6.69□□□□□ -1.34
ATXN3-247ENST00000557311 ST20-MTHFSA0A0A6YYL1 179 aa6.69□□□□□ -1.34
ATXN3-247ENST00000557311 HSP90AB1P08238 724 aaKnown RBP6.69□□□□□ -1.34
ATXN3-247ENST00000557311 CHRNA5P30532 468 aa6.69□□□□□ -1.34
ATXN3-247ENST00000557311 IRS1P35568 1242 aa6.69□□□□□ -1.34
ATXN3-247ENST00000557311 C4orf17Q53FE4 359 aa6.69□□□□□ -1.34
ATXN3-247ENST00000557311 LYPD4Q6UWN0 246 aa6.69□□□□□ -1.34
ATXN3-247ENST00000557311 RHBDD1Q8TEB9 315 aa6.69□□□□□ -1.34
ATXN3-247ENST00000557311 NIFKQ9BYG3 293 aaKnown RBP6.69□□□□□ -1.34
ATXN3-247ENST00000557311 PRDM10Q9NQV6 1147 aa6.69□□□□□ -1.34
ATXN3-247ENST00000557311 ZNF358Q9NW07 568 aa6.69□□□□□ -1.34
ATXN3-247ENST00000557311 DYRK1BQ9Y463 629 aa6.69□□□□□ -1.34
ATXN3-247ENST00000557311 KCPQ6ZWJ8 1503 aa6.69□□□□□ -1.34
ATXN3-247ENST00000557311 CNTNAP4Q9C0A0 1308 aa6.69□□□□□ -1.34
ATXN3-247ENST00000557311 TUBGCP6Q96RT7 1819 aa6.69□□□□□ -1.34
ATXN3-247ENST00000557311 TONSLQ96HA7 1378 aa6.69□□□□□ -1.34
ATXN3-247ENST00000557311 USP54Q70EL1 1684 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 C4BP0C0L5 1744 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 A6NJY4 79 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 TMEM229AB2RXF0 380 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 SPATA31C2B4DYI2 1134 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 H7C1W4 665 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 PPM1GO15355 546 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-247ENST00000557311 F11P03951 625 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 TM4SF1P30408 202 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 CLDN10P78369 228 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 DDR1Q08345 913 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 GAS6Q14393 721 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 HINFPQ9BQA5 517 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 ZNF232Q9UNY5 417 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 CHMP3Q9Y3E7 222 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 WASHC2AQ641Q2 1341 aa6.68□□□□□ -1.34
ATXN3-247ENST00000557311 MON2Q7Z3U7 1717 aa6.67□□□□□ -1.34
ATXN3-247ENST00000557311 DOT1LQ8TEK3 1739 aa6.67□□□□□ -1.34
ATXN3-247ENST00000557311 A0A1B0GTH6 734 aa6.67□□□□□ -1.34
ATXN3-247ENST00000557311 SFI1A8K8P3 1242 aa6.67□□□□□ -1.34
ATXN3-247ENST00000557311 CTCFP49711 727 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms