RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 RXRBP28702 533 aa4.07□□□□□ -1.76
SLIRP-208ENST00000556956 NAA30Q147X3 362 aaPredicted RBP4.07□□□□□ -1.76
SLIRP-208ENST00000556956 SKOR2Q2VWA4 1001 aaPredicted RBP4.07□□□□□ -1.76
SLIRP-208ENST00000556956 ANKRD34AQ69YU3 496 aa4.07□□□□□ -1.76
SLIRP-208ENST00000556956 B4GALNT3Q6L9W6 998 aa4.07□□□□□ -1.76
SLIRP-208ENST00000556956 NLRP13Q86W25 1043 aa4.07□□□□□ -1.76
SLIRP-208ENST00000556956 CCDC82Q8N4S0 544 aa4.07□□□□□ -1.76
SLIRP-208ENST00000556956 SPACA7Q96KW9 195 aa4.07□□□□□ -1.76
SLIRP-208ENST00000556956 WDR26Q9H7D7 661 aa4.07□□□□□ -1.76
SLIRP-208ENST00000556956 TLR7Q9NYK1 1049 aaKnown RBP4.07□□□□□ -1.76
SLIRP-208ENST00000556956 UBAP1LF5GYI3 381 aa4.06□□□□□ -1.76
SLIRP-208ENST00000556956 GAS2O43903 313 aaKnown RBP4.06□□□□□ -1.76
SLIRP-208ENST00000556956 CDC25BP30305 580 aa4.06□□□□□ -1.76
SLIRP-208ENST00000556956 SOX18P35713 384 aa4.06□□□□□ -1.76
SLIRP-208ENST00000556956 TTC39BQ5VTQ0 682 aaPredicted RBP4.06□□□□□ -1.76
SLIRP-208ENST00000556956 ALKBH2Q6NS38 261 aa4.06□□□□□ -1.76
SLIRP-208ENST00000556956 MKNK1Q9BUB5 465 aa4.06□□□□□ -1.76
SLIRP-208ENST00000556956 SAP130Q9H0E3 1048 aa4.06□□□□□ -1.76
SLIRP-208ENST00000556956 PARD6AQ9NPB6 346 aa4.06□□□□□ -1.76
SLIRP-208ENST00000556956 LOC102724428A0A0B4J2F2 783 aa4.05□□□□□ -1.76
SLIRP-208ENST00000556956 FAM177BA6PVY3 158 aa4.05□□□□□ -1.76
SLIRP-208ENST00000556956 ZAP70P43403 619 aa4.05□□□□□ -1.76
SLIRP-208ENST00000556956 SIK1P57059 783 aa4.05□□□□□ -1.76
SLIRP-208ENST00000556956 NFKBIBQ15653 356 aa4.05□□□□□ -1.76
SLIRP-208ENST00000556956 ZAR1Q86SH2 424 aa4.05□□□□□ -1.76
SLIRP-208ENST00000556956 ZSWIM9Q86XI8 627 aa4.05□□□□□ -1.76
SLIRP-208ENST00000556956 ETFBKMTQ8IXQ9 262 aa4.05□□□□□ -1.76
SLIRP-208ENST00000556956 PMEPA1Q969W9 287 aa4.05□□□□□ -1.76
SLIRP-208ENST00000556956 TBC1D32Q96NH3 1257 aa4.05□□□□□ -1.76
SLIRP-208ENST00000556956 ADAM19Q9H013 955 aa4.05□□□□□ -1.76
SLIRP-208ENST00000556956 MUC3BQ9H195 1237 aa4.05□□□□□ -1.76
SLIRP-208ENST00000556956 ACSS3Q9H6R3 686 aa4.05□□□□□ -1.76
SLIRP-208ENST00000556956 CRIM1Q9NZV1 1036 aa4.05□□□□□ -1.76
SLIRP-208ENST00000556956 SMARCA4P51532 1647 aa4.04□□□□□ -1.76
SLIRP-208ENST00000556956 CD8BP10966 210 aa4.04□□□□□ -1.76
SLIRP-208ENST00000556956 HOXD8P13378 290 aaPredicted RBP4.04□□□□□ -1.76
SLIRP-208ENST00000556956 SSFA2P28290 1259 aa4.04□□□□□ -1.76
SLIRP-208ENST00000556956 SCNN1AP37088 669 aa4.04□□□□□ -1.76
SLIRP-208ENST00000556956 USP5P45974 858 aa4.04□□□□□ -1.76
SLIRP-208ENST00000556956 AAMPQ13685 434 aa4.04□□□□□ -1.76
SLIRP-208ENST00000556956 NOM1Q5C9Z4 860 aaKnown RBP4.04□□□□□ -1.76
SLIRP-208ENST00000556956 PDE12Q6L8Q7 609 aaKnown RBP4.04□□□□□ -1.76
SLIRP-208ENST00000556956 PRR23BQ6ZRT6 265 aa4.04□□□□□ -1.76
SLIRP-208ENST00000556956 GATA6Q92908 595 aa4.04□□□□□ -1.76
SLIRP-208ENST00000556956 CRELD1Q96HD1 420 aa4.04□□□□□ -1.76
SLIRP-208ENST00000556956 KCNMB2Q9Y691 235 aa4.04□□□□□ -1.76
SLIRP-208ENST00000556956 BAZ1AQ9NRL2 1556 aaPredicted RBP4.04□□□□□ -1.76
SLIRP-208ENST00000556956 MROH2BQ7Z745 1585 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 FAM95CA0A1B0GW59 222 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 NFIBO00712 420 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 MMP20O60882 483 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 FAM13AO94988 1023 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 NEFLP07196 543 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 CD96P40200 585 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 HYAL2Q12891 473 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 SF3B2Q13435 895 aaKnown RBP4.03□□□□□ -1.76
SLIRP-208ENST00000556956 KCNA10Q16322 511 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 FDX2Q6P4F2 183 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 ADAMTSL4Q6UY14 1074 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 LSRQ86X29 649 aaPredicted RBP4.03□□□□□ -1.76
SLIRP-208ENST00000556956 HELQQ8TDG4 1101 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 GPR152Q8TDT2 470 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 NSUN5Q96P11 429 aaKnown RBP4.03□□□□□ -1.76
SLIRP-208ENST00000556956 ABI2Q9NYB9 513 aaPredicted RBP4.03□□□□□ -1.76
SLIRP-208ENST00000556956 USTQ9Y2C2 406 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 USP20Q9Y2K6 914 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 GOLGA3Q08378 1498 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 CECR2Q9BXF3 1484 aa4.03□□□□□ -1.76
SLIRP-208ENST00000556956 TNFRSF10BO14763 440 aa4.02□□□□□ -1.77
SLIRP-208ENST00000556956 FSCN2O14926 492 aa4.02□□□□□ -1.77
SLIRP-208ENST00000556956 SMNDC1O75940 238 aaKnown RBP eCLIP4.02□□□□□ -1.77
SLIRP-208ENST00000556956 ADRB1P08588 477 aa4.02□□□□□ -1.77
SLIRP-208ENST00000556956 EHHADHQ08426 723 aa4.02□□□□□ -1.77
SLIRP-208ENST00000556956 KCNMB1Q16558 191 aa4.02□□□□□ -1.77
SLIRP-208ENST00000556956 CIAPIN1Q6FI81 312 aa4.02□□□□□ -1.77
SLIRP-208ENST00000556956 PAOXQ6QHF9 649 aa4.02□□□□□ -1.77
SLIRP-208ENST00000556956 XKR5Q6UX68 686 aa4.02□□□□□ -1.77
SLIRP-208ENST00000556956 OR13H1Q8NG92 308 aa4.02□□□□□ -1.77
SLIRP-208ENST00000556956 GTF3C2Q8WUA4 911 aaPredicted RBP4.02□□□□□ -1.77
SLIRP-208ENST00000556956 KLHDC7BQ96G42 594 aa4.02□□□□□ -1.77
SLIRP-208ENST00000556956 RNF208Q9H0X6 261 aa4.02□□□□□ -1.77
SLIRP-208ENST00000556956 CD320Q9NPF0 282 aa4.02□□□□□ -1.77
SLIRP-208ENST00000556956 PRKAG2Q9UGJ0 569 aa4.02□□□□□ -1.77
SLIRP-208ENST00000556956 WIZO95785 1651 aa4.01□□□□□ -1.77
SLIRP-208ENST00000556956 TMEM88BA6NKF7 163 aa4.01□□□□□ -1.77
SLIRP-208ENST00000556956 AKAP8O43823 692 aaKnown RBP4.01□□□□□ -1.77
SLIRP-208ENST00000556956 MZF1P28698 734 aaPredicted RBP4.01□□□□□ -1.77
SLIRP-208ENST00000556956 FKBP4Q02790 459 aaKnown RBP eCLIP4.01□□□□□ -1.77
SLIRP-208ENST00000556956 ZXDCQ2QGD7 858 aaPredicted RBP4.01□□□□□ -1.77
SLIRP-208ENST00000556956 FAM117BQ6P1L5 589 aa4.01□□□□□ -1.77
SLIRP-208ENST00000556956 CAPN12Q6ZSI9 719 aa4.01□□□□□ -1.77
SLIRP-208ENST00000556956 ZNF765Q7L2R6 523 aa4.01□□□□□ -1.77
SLIRP-208ENST00000556956 ZNF438Q7Z4V0 828 aa4.01□□□□□ -1.77
SLIRP-208ENST00000556956 NCAPG2Q86XI2 1143 aa4.01□□□□□ -1.77
SLIRP-208ENST00000556956 STK11IPQ8N1F8 1099 aa4.01□□□□□ -1.77
SLIRP-208ENST00000556956 PI4K2BQ8TCG2 481 aa4.01□□□□□ -1.77
SLIRP-208ENST00000556956 FBLIM1Q8WUP2 373 aa4.01□□□□□ -1.77
SLIRP-208ENST00000556956 LACRTQ9GZZ8 138 aa4.01□□□□□ -1.77
SLIRP-208ENST00000556956 ELP3Q9H9T3 547 aa4.01□□□□□ -1.77
SLIRP-208ENST00000556956 SEPT3Q9UH03 358 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms