RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 TRIM56Q9BRZ2 755 aaKnown RBP8.73□□□□□ -1.01
LINC00648-203ENST00000556923 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
LINC00648-203ENST00000556923 GADD45BO75293 160 aaPredicted RBP8.72□□□□□ -1.01
LINC00648-203ENST00000556923 B3GALT4O96024 378 aa8.72□□□□□ -1.01
LINC00648-203ENST00000556923 TGFB1P01137 390 aa8.72□□□□□ -1.01
LINC00648-203ENST00000556923 MAOBP27338 520 aa8.72□□□□□ -1.01
LINC00648-203ENST00000556923 ZDHHC13Q8IUH4 622 aa8.72□□□□□ -1.01
LINC00648-203ENST00000556923 GLIS3Q8NEA6 775 aa8.72□□□□□ -1.01
LINC00648-203ENST00000556923 EPS8L3Q8TE67 593 aaKnown RBP8.72□□□□□ -1.01
LINC00648-203ENST00000556923 DBNDD2Q9BQY9 259 aa8.72□□□□□ -1.01
LINC00648-203ENST00000556923 DCTN4Q9UJW0 460 aa8.72□□□□□ -1.01
LINC00648-203ENST00000556923 DRD2P14416 443 aa8.71□□□□□ -1.02
LINC00648-203ENST00000556923 MAP4P27816 1152 aaKnown RBP8.71□□□□□ -1.02
LINC00648-203ENST00000556923 GRM2Q14416 872 aa8.71□□□□□ -1.02
LINC00648-203ENST00000556923 POU4F3Q15319 338 aa8.71□□□□□ -1.02
LINC00648-203ENST00000556923 NBPF11Q86T75 865 aa8.71□□□□□ -1.02
LINC00648-203ENST00000556923 ECEL1O95672 775 aa8.7□□□□□ -1.02
LINC00648-203ENST00000556923 CYP11A1P05108 521 aa8.7□□□□□ -1.02
LINC00648-203ENST00000556923 SSTR4P31391 388 aa8.7□□□□□ -1.02
LINC00648-203ENST00000556923 CD97P48960 835 aa8.7□□□□□ -1.02
LINC00648-203ENST00000556923 PTPN12Q05209 780 aaKnown RBP8.7□□□□□ -1.02
LINC00648-203ENST00000556923 PI16Q6UXB8 463 aa8.7□□□□□ -1.02
LINC00648-203ENST00000556923 C2CD4AQ8NCU7 369 aaPredicted RBP8.7□□□□□ -1.02
LINC00648-203ENST00000556923 TMEM238LA0A1B0GVL6 79 aa8.69□□□□□ -1.02
LINC00648-203ENST00000556923 MAPK1P28482 360 aa8.69□□□□□ -1.02
LINC00648-203ENST00000556923 DSC3Q14574 896 aa8.69□□□□□ -1.02
LINC00648-203ENST00000556923 MED26O95402 600 aa8.68□□□□□ -1.02
LINC00648-203ENST00000556923 ADH5P11766 374 aa8.68□□□□□ -1.02
LINC00648-203ENST00000556923 SOX4Q06945 474 aaPredicted RBP8.68□□□□□ -1.02
LINC00648-203ENST00000556923 CDPF1Q6NVV7 123 aa8.68□□□□□ -1.02
LINC00648-203ENST00000556923 PCMTD2Q9NV79 361 aa8.68□□□□□ -1.02
LINC00648-203ENST00000556923 TRAK1Q9UPV9 953 aa8.68□□□□□ -1.02
LINC00648-203ENST00000556923 IVNS1ABPQ9Y6Y0 642 aa8.68□□□□□ -1.02
LINC00648-203ENST00000556923 PRR19A6NJB7 356 aa8.67□□□□□ -1.02
LINC00648-203ENST00000556923 RXRBP28702 533 aa8.67□□□□□ -1.02
LINC00648-203ENST00000556923 FAAP100Q0VG06 881 aa8.67□□□□□ -1.02
LINC00648-203ENST00000556923 SHKBP1Q8TBC3 707 aa8.67□□□□□ -1.02
LINC00648-203ENST00000556923 DDX54Q8TDD1 881 aaKnown RBP8.67□□□□□ -1.02
LINC00648-203ENST00000556923 CORO1BQ9BR76 489 aa8.67□□□□□ -1.02
LINC00648-203ENST00000556923 TREHO43280 583 aa8.66□□□□□ -1.02
LINC00648-203ENST00000556923 RPS26P11Q5JNZ5 115 aaPredicted RBP8.66□□□□□ -1.02
LINC00648-203ENST00000556923 FBLIM1Q8WUP2 373 aa8.66□□□□□ -1.02
LINC00648-203ENST00000556923 MFSD14AQ96MC6 490 aa8.66□□□□□ -1.02
LINC00648-203ENST00000556923 PNMA6FA0A0J9YX94 578 aa8.65□□□□□ -1.02
LINC00648-203ENST00000556923 COBLO75128 1261 aa8.65□□□□□ -1.02
LINC00648-203ENST00000556923 USP11P51784 963 aa8.65□□□□□ -1.02
LINC00648-203ENST00000556923 ZNF157P51786 506 aaPredicted RBP8.65□□□□□ -1.02
LINC00648-203ENST00000556923 HP1BP3Q5SSJ5 553 aaPredicted RBP8.65□□□□□ -1.02
LINC00648-203ENST00000556923 NLRP2Q9NX02 1062 aa8.65□□□□□ -1.02
LINC00648-203ENST00000556923 ACTL7BQ9Y614 415 aa8.65□□□□□ -1.02
LINC00648-203ENST00000556923 FAM95CA0A1B0GW59 222 aa8.64□□□□□ -1.03
LINC00648-203ENST00000556923 KIAA1324LA8MWY0 1029 aaPredicted RBP8.64□□□□□ -1.03
LINC00648-203ENST00000556923 FCGRTP55899 365 aa8.64□□□□□ -1.03
LINC00648-203ENST00000556923 PLCB3Q01970 1234 aa8.64□□□□□ -1.03
LINC00648-203ENST00000556923 KCNA1Q09470 495 aa8.64□□□□□ -1.03
LINC00648-203ENST00000556923 AP3B2Q13367 1082 aa8.64□□□□□ -1.03
LINC00648-203ENST00000556923 ENOX2Q16206 610 aaKnown RBP8.64□□□□□ -1.03
LINC00648-203ENST00000556923 AKAP4Q5JQC9 854 aa8.64□□□□□ -1.03
LINC00648-203ENST00000556923 DTHD1Q6ZMT9 781 aa8.64□□□□□ -1.03
LINC00648-203ENST00000556923 BCO2Q9BYV7 579 aa8.64□□□□□ -1.03
LINC00648-203ENST00000556923 ZFYVE1Q9HBF4 777 aa8.64□□□□□ -1.03
LINC00648-203ENST00000556923 WDR64B1ANS9 1081 aa8.63□□□□□ -1.03
LINC00648-203ENST00000556923 NFKBIBQ15653 356 aa8.63□□□□□ -1.03
LINC00648-203ENST00000556923 SHISA5Q8N114 240 aa8.63□□□□□ -1.03
LINC00648-203ENST00000556923 EZH1Q92800 747 aaPredicted RBP8.63□□□□□ -1.03
LINC00648-203ENST00000556923 RAD18Q9NS91 495 aa8.63□□□□□ -1.03
LINC00648-203ENST00000556923 AOC2O75106 756 aa8.62□□□□□ -1.03
LINC00648-203ENST00000556923 F13BP05160 661 aa8.62□□□□□ -1.03
LINC00648-203ENST00000556923 PDE3AQ14432 1141 aa8.62□□□□□ -1.03
LINC00648-203ENST00000556923 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.62□□□□□ -1.03
LINC00648-203ENST00000556923 PAOXQ6QHF9 649 aa8.62□□□□□ -1.03
LINC00648-203ENST00000556923 FBXL6Q8N531 539 aa8.62□□□□□ -1.03
LINC00648-203ENST00000556923 WDR18Q9BV38 432 aa8.62□□□□□ -1.03
LINC00648-203ENST00000556923 AP4E1Q9UPM8 1137 aa8.62□□□□□ -1.03
LINC00648-203ENST00000556923 GRIK1P39086 918 aa8.61□□□□□ -1.03
LINC00648-203ENST00000556923 INTS5Q6P9B9 1019 aaKnown RBP8.61□□□□□ -1.03
LINC00648-203ENST00000556923 NXPE4Q6UWF7 544 aa8.61□□□□□ -1.03
LINC00648-203ENST00000556923 DYMQ7RTS9 669 aa8.61□□□□□ -1.03
LINC00648-203ENST00000556923 YIPF2Q9BWQ6 316 aa8.61□□□□□ -1.03
LINC00648-203ENST00000556923 FAM105AQ9NUU6 356 aa8.61□□□□□ -1.03
LINC00648-203ENST00000556923 SPINK2P20155 84 aa8.6□□□□□ -1.03
LINC00648-203ENST00000556923 RAB6AP20340 208 aa8.6□□□□□ -1.03
LINC00648-203ENST00000556923 ADMP35318 185 aa8.6□□□□□ -1.03
LINC00648-203ENST00000556923 FMR1Q06787 632 aaKnown RBP eCLIP8.6□□□□□ -1.03
LINC00648-203ENST00000556923 WDR89Q96FK6 387 aaPredicted RBP8.6□□□□□ -1.03
LINC00648-203ENST00000556923 TRAIPQ9BWF2 469 aa8.6□□□□□ -1.03
LINC00648-203ENST00000556923 ZC3H12CQ9C0D7 883 aaKnown RBP8.6□□□□□ -1.03
LINC00648-203ENST00000556923 GSX1Q9H4S2 264 aaPredicted RBP8.6□□□□□ -1.03
LINC00648-203ENST00000556923 CCDC86Q9H6F5 360 aaKnown RBP8.6□□□□□ -1.03
LINC00648-203ENST00000556923 PPP4R2Q9NY27 417 aa8.6□□□□□ -1.03
LINC00648-203ENST00000556923 PRKAG2Q9UGJ0 569 aa8.6□□□□□ -1.03
LINC00648-203ENST00000556923 GPN3Q9UHW5 284 aaPredicted RBP8.6□□□□□ -1.03
LINC00648-203ENST00000556923 NFICP08651 508 aa8.59□□□□□ -1.03
LINC00648-203ENST00000556923 XRCC5P13010 732 aaKnown RBP8.59□□□□□ -1.03
LINC00648-203ENST00000556923 HOXA10P31260 410 aaPredicted RBP8.59□□□□□ -1.03
LINC00648-203ENST00000556923 MAPK8P45983 427 aa8.59□□□□□ -1.03
LINC00648-203ENST00000556923 ZSCAN29Q8IWY8 852 aaPredicted RBP8.59□□□□□ -1.03
LINC00648-203ENST00000556923 ASB16Q96NS5 453 aa8.59□□□□□ -1.03
LINC00648-203ENST00000556923 SETDB2Q96T68 719 aa8.59□□□□□ -1.03
LINC00648-203ENST00000556923 SEMA6CQ9H3T2 930 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms