RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 TRIM28Q13263 835 aaKnown RBP8.09□□□□□ -1.11
TMEM260-212ENST00000556810 C11orf91Q3C1V1 193 aa8.09□□□□□ -1.11
TMEM260-212ENST00000556810 SLC26A8Q96RN1 970 aa8.09□□□□□ -1.11
TMEM260-212ENST00000556810 TMEM94Q12767 1356 aa8.09□□□□□ -1.12
TMEM260-212ENST00000556810 TMEM2Q9UHN6 1383 aa8.09□□□□□ -1.12
TMEM260-212ENST00000556810 ADGRF5Q8IZF2 1346 aa8.08□□□□□ -1.12
TMEM260-212ENST00000556810 CENPJQ9HC77 1338 aaPredicted RBP8.08□□□□□ -1.12
TMEM260-212ENST00000556810 MICAL2O94851 1124 aa8.08□□□□□ -1.12
TMEM260-212ENST00000556810 TESK2Q96S53 571 aa8.08□□□□□ -1.12
TMEM260-212ENST00000556810 JPH1Q9HDC5 661 aaPredicted RBP8.08□□□□□ -1.12
TMEM260-212ENST00000556810 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.08□□□□□ -1.12
TMEM260-212ENST00000556810 DOC2BQ14184 412 aa8.07□□□□□ -1.12
TMEM260-212ENST00000556810 TRAPPC3LQ5T215 181 aa8.07□□□□□ -1.12
TMEM260-212ENST00000556810 NUDT8Q8WV74 236 aa8.07□□□□□ -1.12
TMEM260-212ENST00000556810 NAGPAQ9UK23 515 aa8.07□□□□□ -1.12
TMEM260-212ENST00000556810 KNSTRNQ9Y448 316 aa8.07□□□□□ -1.12
TMEM260-212ENST00000556810 ROBO1Q9Y6N7 1651 aa8.07□□□□□ -1.12
TMEM260-212ENST00000556810 FKBP5Q13451 457 aaPredicted RBP8.06□□□□□ -1.12
TMEM260-212ENST00000556810 SWI5Q1ZZU3 235 aa8.06□□□□□ -1.12
TMEM260-212ENST00000556810 PSAPL1Q6NUJ1 521 aa8.06□□□□□ -1.12
TMEM260-212ENST00000556810 NACC1Q96RE7 527 aa8.06□□□□□ -1.12
TMEM260-212ENST00000556810 C11orf16Q9NQ32 467 aa8.06□□□□□ -1.12
TMEM260-212ENST00000556810 SLAIN2Q9P270 581 aa8.06□□□□□ -1.12
TMEM260-212ENST00000556810 LRFN2Q9ULH4 789 aa8.06□□□□□ -1.12
TMEM260-212ENST00000556810 EVC2Q86UK5 1308 aa8.05□□□□□ -1.12
TMEM260-212ENST00000556810 MAP3K6O95382 1288 aa8.05□□□□□ -1.12
TMEM260-212ENST00000556810 ELOAQ14241 798 aaKnown RBP8.05□□□□□ -1.12
TMEM260-212ENST00000556810 GRIK4Q16099 956 aa8.05□□□□□ -1.12
TMEM260-212ENST00000556810 PCSK7Q16549 785 aa8.05□□□□□ -1.12
TMEM260-212ENST00000556810 KRT25Q7Z3Z0 450 aa8.05□□□□□ -1.12
TMEM260-212ENST00000556810 TMC1Q8TDI8 760 aa8.05□□□□□ -1.12
TMEM260-212ENST00000556810 IFT43Q96FT9 208 aa8.05□□□□□ -1.12
TMEM260-212ENST00000556810 PRIMPOLQ96LW4 560 aa8.05□□□□□ -1.12
TMEM260-212ENST00000556810 PODXL2Q9NZ53 605 aa8.05□□□□□ -1.12
TMEM260-212ENST00000556810 ZFATQ9P243 1243 aa8.05□□□□□ -1.12
TMEM260-212ENST00000556810 ZMIZ1Q9ULJ6 1067 aa8.05□□□□□ -1.12
TMEM260-212ENST00000556810 QRICH2Q9H0J4 1663 aa8.05□□□□□ -1.12
TMEM260-212ENST00000556810 MYBBP1AQ9BQG0 1328 aaKnown RBP8.04□□□□□ -1.12
TMEM260-212ENST00000556810 PRMT3O60678 531 aa8.04□□□□□ -1.12
TMEM260-212ENST00000556810 RGS9O75916 674 aaPredicted RBP8.04□□□□□ -1.12
TMEM260-212ENST00000556810 AFF1P51825 1210 aaKnown RBP8.04□□□□□ -1.12
TMEM260-212ENST00000556810 CCDC82Q8N4S0 544 aa8.04□□□□□ -1.12
TMEM260-212ENST00000556810 MRS2Q9HD23 443 aa8.04□□□□□ -1.12
TMEM260-212ENST00000556810 TRAK1Q9UPV9 953 aa8.04□□□□□ -1.12
TMEM260-212ENST00000556810 BRD4O60885 1362 aaPredicted RBP8.04□□□□□ -1.12
TMEM260-212ENST00000556810 NINLQ9Y2I6 1382 aa8.04□□□□□ -1.12
TMEM260-212ENST00000556810 RIMS2Q9UQ26 1411 aa8.03□□□□□ -1.12
TMEM260-212ENST00000556810 SETD1AO15047 1707 aaKnown RBP8.03□□□□□ -1.12
TMEM260-212ENST00000556810 PHLPP1O60346 1717 aa8.03□□□□□ -1.12
TMEM260-212ENST00000556810 ADGRB1O14514 1584 aa8.03□□□□□ -1.12
TMEM260-212ENST00000556810 MSH6P52701 1360 aa8.03□□□□□ -1.12
TMEM260-212ENST00000556810 NPC1L1Q9UHC9 1359 aa8.03□□□□□ -1.12
TMEM260-212ENST00000556810 A0A0A0MRY4 1105 aa8.03□□□□□ -1.12
TMEM260-212ENST00000556810 SASH3O75995 380 aa8.03□□□□□ -1.12
TMEM260-212ENST00000556810 TARSP26639 723 aaKnown RBP8.03□□□□□ -1.12
TMEM260-212ENST00000556810 COX20Q5RI15 118 aa8.03□□□□□ -1.12
TMEM260-212ENST00000556810 DHX32Q7L7V1 743 aaKnown RBP8.03□□□□□ -1.12
TMEM260-212ENST00000556810 FAM35AQ86V20 835 aa8.03□□□□□ -1.12
TMEM260-212ENST00000556810 STK32AQ8WU08 396 aa8.03□□□□□ -1.12
TMEM260-212ENST00000556810 PANK3Q9H999 370 aa8.03□□□□□ -1.12
TMEM260-212ENST00000556810 POGKQ9P215 609 aa8.03□□□□□ -1.12
TMEM260-212ENST00000556810 RTCBQ9Y3I0 505 aaKnown RBP8.03□□□□□ -1.12
TMEM260-212ENST00000556810 ARHGEF28Q8N1W1 1705 aaKnown RBP8.03□□□□□ -1.12
TMEM260-212ENST00000556810 CHD2O14647 1828 aaKnown RBP8.02□□□□□ -1.13
TMEM260-212ENST00000556810 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.02□□□□□ -1.13
TMEM260-212ENST00000556810 OPLAHO14841 1288 aa8.02□□□□□ -1.13
TMEM260-212ENST00000556810 RARAP10276 462 aa8.02□□□□□ -1.13
TMEM260-212ENST00000556810 CPB1P15086 417 aa8.02□□□□□ -1.13
TMEM260-212ENST00000556810 ELNP15502 786 aa8.02□□□□□ -1.13
TMEM260-212ENST00000556810 RAC1P63000 192 aa8.02□□□□□ -1.13
TMEM260-212ENST00000556810 OCLNQ16625 522 aa8.02□□□□□ -1.13
TMEM260-212ENST00000556810 NLRP13Q86W25 1043 aa8.02□□□□□ -1.13
TMEM260-212ENST00000556810 TREML1Q86YW5 311 aa8.02□□□□□ -1.13
TMEM260-212ENST00000556810 TRPM4Q8TD43 1214 aa8.02□□□□□ -1.13
TMEM260-212ENST00000556810 SEMA6BQ9H3T3 888 aa8.02□□□□□ -1.13
TMEM260-212ENST00000556810 USP20Q9Y2K6 914 aa8.02□□□□□ -1.13
TMEM260-212ENST00000556810 JCADQ9P266 1359 aa8.01□□□□□ -1.13
TMEM260-212ENST00000556810 ZBTB42B2RXF5 422 aa8.01□□□□□ -1.13
TMEM260-212ENST00000556810 C9orf172C9J069 976 aa8.01□□□□□ -1.13
TMEM260-212ENST00000556810 SRPK2P78362 688 aaKnown RBP8.01□□□□□ -1.13
TMEM260-212ENST00000556810 GPLD1P80108 840 aa8.01□□□□□ -1.13
TMEM260-212ENST00000556810 TPSG1Q9NRR2 321 aa8.01□□□□□ -1.13
TMEM260-212ENST00000556810 FRRS1LQ9P0K9 344 aa8.01□□□□□ -1.13
TMEM260-212ENST00000556810 DLC1Q96QB1 1528 aa8.01□□□□□ -1.13
TMEM260-212ENST00000556810 YTHDC2Q9H6S0 1430 aaKnown RBP8.01□□□□□ -1.13
TMEM260-212ENST00000556810 EGFRP00533 1210 aa8□□□□□ -1.13
TMEM260-212ENST00000556810 SELPP16109 830 aa8□□□□□ -1.13
TMEM260-212ENST00000556810 ARID4AP29374 1257 aaPredicted RBP8□□□□□ -1.13
TMEM260-212ENST00000556810 MLLT1Q03111 559 aaPredicted RBP8□□□□□ -1.13
TMEM260-212ENST00000556810 RSPO4Q2I0M5 234 aaPredicted RBP8□□□□□ -1.13
TMEM260-212ENST00000556810 PERM1Q5SV97 790 aa8□□□□□ -1.13
TMEM260-212ENST00000556810 DMRTC2Q8IXT2 367 aaPredicted RBP8□□□□□ -1.13
TMEM260-212ENST00000556810 RGL4Q8IZJ4 473 aa8□□□□□ -1.13
TMEM260-212ENST00000556810 LPIN3Q9BQK8 851 aa8□□□□□ -1.13
TMEM260-212ENST00000556810 NKTRP30414 1462 aaKnown RBP8□□□□□ -1.13
TMEM260-212ENST00000556810 INSRP06213 1382 aa7.99□□□□□ -1.13
TMEM260-212ENST00000556810 LRPPRCP42704 1394 aaKnown RBP7.99□□□□□ -1.13
TMEM260-212ENST00000556810 PARD3Q8TEW0 1356 aa7.99□□□□□ -1.13
TMEM260-212ENST00000556810 ABCC11Q96J66 1382 aa7.99□□□□□ -1.13
TMEM260-212ENST00000556810 ASXL1Q8IXJ9 1541 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms