RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 CCDC158Q5M9N0 1113 aa12.98□□□□□ -0.33
MTHFD1-214ENST00000556771 APOBEC3FQ8IUX4 373 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-214ENST00000556771 EXOC6BQ9Y2D4 811 aa12.98□□□□□ -0.33
MTHFD1-214ENST00000556771 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.98□□□□□ -0.33
MTHFD1-214ENST00000556771 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-214ENST00000556771 F8W031 263 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-214ENST00000556771 ARID4AP29374 1257 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-214ENST00000556771 RASGRF1Q13972 1273 aa12.97□□□□□ -0.33
MTHFD1-214ENST00000556771 NBPF9Q3BBW0 867 aa12.97□□□□□ -0.33
MTHFD1-214ENST00000556771 ANGEL2Q5VTE6 544 aaKnown RBP12.97□□□□□ -0.33
MTHFD1-214ENST00000556771 SPTY2D1Q68D10 685 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-214ENST00000556771 RHPN1Q8TCX5 695 aa12.97□□□□□ -0.33
MTHFD1-214ENST00000556771 ZNF512BQ96KM6 892 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-214ENST00000556771 GLIS2Q9BZE0 524 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-214ENST00000556771 ECM29Q5VYK3 1845 aa12.97□□□□□ -0.33
MTHFD1-214ENST00000556771 IGSF3O75054 1194 aa12.96□□□□□ -0.33
MTHFD1-214ENST00000556771 LDHBP07195 334 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-214ENST00000556771 TTC39AQ5SRH9 613 aa12.96□□□□□ -0.33
MTHFD1-214ENST00000556771 USP48Q86UV5 1035 aa12.96□□□□□ -0.33
MTHFD1-214ENST00000556771 CLASRPQ8N2M8 674 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-214ENST00000556771 TEKT1Q969V4 418 aa12.96□□□□□ -0.33
MTHFD1-214ENST00000556771 CRBNQ96SW2 442 aa12.96□□□□□ -0.33
MTHFD1-214ENST00000556771 DBNDD2Q9BQY9 259 aa12.96□□□□□ -0.33
MTHFD1-214ENST00000556771 POLR2AP24928 1970 aaKnown RBP12.95□□□□□ -0.34
MTHFD1-214ENST00000556771 TRAF5O00463 557 aa12.95□□□□□ -0.34
MTHFD1-214ENST00000556771 CRKP46108 304 aa12.95□□□□□ -0.34
MTHFD1-214ENST00000556771 RBM5P52756 815 aaKnown RBP eCLIP12.95□□□□□ -0.34
MTHFD1-214ENST00000556771 HHIPL2Q6UWX4 724 aa12.95□□□□□ -0.34
MTHFD1-214ENST00000556771 AACSQ86V21 672 aa12.95□□□□□ -0.34
MTHFD1-214ENST00000556771 SLF2Q8IX21 1173 aa12.95□□□□□ -0.34
MTHFD1-214ENST00000556771 SPATA5Q8NB90 893 aa12.95□□□□□ -0.34
MTHFD1-214ENST00000556771 EAF2Q96CJ1 260 aaPredicted RBP12.95□□□□□ -0.34
MTHFD1-214ENST00000556771 ZDHHC15Q96MV8 337 aa12.95□□□□□ -0.34
MTHFD1-214ENST00000556771 PPP2R3BQ9Y5P8 575 aa12.95□□□□□ -0.34
MTHFD1-214ENST00000556771 ASTN2O75129 1339 aaPredicted RBP12.94□□□□□ -0.34
MTHFD1-214ENST00000556771 CELF2O95319 508 aaKnown RBP12.94□□□□□ -0.34
MTHFD1-214ENST00000556771 TNFAIP1Q13829 316 aa12.94□□□□□ -0.34
MTHFD1-214ENST00000556771 LRRCC1Q9C099 1032 aa12.94□□□□□ -0.34
MTHFD1-214ENST00000556771 HMG20BQ9P0W2 317 aa12.94□□□□□ -0.34
MTHFD1-214ENST00000556771 DBNLQ9UJU6 430 aaKnown RBP12.94□□□□□ -0.34
MTHFD1-214ENST00000556771 SUPT16HQ9Y5B9 1047 aaKnown RBP12.94□□□□□ -0.34
MTHFD1-214ENST00000556771 ADM5C9JUS6 153 aa12.93□□□□□ -0.34
MTHFD1-214ENST00000556771 PRDX5P30044 214 aa12.93□□□□□ -0.34
MTHFD1-214ENST00000556771 MCAMP43121 646 aa12.93□□□□□ -0.34
MTHFD1-214ENST00000556771 GRIK5Q16478 980 aa12.93□□□□□ -0.34
MTHFD1-214ENST00000556771 PRMT6Q96LA8 375 aaPredicted RBP12.93□□□□□ -0.34
MTHFD1-214ENST00000556771 DCTPP1Q9H773 170 aa12.93□□□□□ -0.34
MTHFD1-214ENST00000556771 IL1RAPL2Q9NP60 686 aa12.93□□□□□ -0.34
MTHFD1-214ENST00000556771 IFIT2P09913 472 aaKnown RBP12.92□□□□□ -0.34
MTHFD1-214ENST00000556771 NF2P35240 595 aa12.92□□□□□ -0.34
MTHFD1-214ENST00000556771 FKBP1BP68106 108 aa12.92□□□□□ -0.34
MTHFD1-214ENST00000556771 CST9Q5W186 159 aa12.92□□□□□ -0.34
MTHFD1-214ENST00000556771 ERICH6Q7L0X2 663 aa12.92□□□□□ -0.34
MTHFD1-214ENST00000556771 DZIP1Q86YF9 867 aaKnown RBP12.92□□□□□ -0.34
MTHFD1-214ENST00000556771 DNAJC5GQ8N7S2 189 aa12.92□□□□□ -0.34
MTHFD1-214ENST00000556771 KLRG1Q96E93 195 aa12.92□□□□□ -0.34
MTHFD1-214ENST00000556771 CDCA5Q96FF9 252 aa12.92□□□□□ -0.34
MTHFD1-214ENST00000556771 CCDC8Q9H0W5 538 aaPredicted RBP12.92□□□□□ -0.34
MTHFD1-214ENST00000556771 TMOD2Q9NZR1 351 aa12.92□□□□□ -0.34
MTHFD1-214ENST00000556771 ABCF2Q9UG63 623 aa12.92□□□□□ -0.34
MTHFD1-214ENST00000556771 ABT1Q9ULW3 272 aaKnown RBP12.92□□□□□ -0.34
MTHFD1-214ENST00000556771 PCDHB15Q9Y5E8 787 aa12.92□□□□□ -0.34
MTHFD1-214ENST00000556771 RASSF10A6NK89 507 aa12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 APBB1O00213 710 aa12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 SLC34A2O95436 690 aa12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 TNNI2P48788 182 aa12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 GSTO1P78417 241 aa12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 FMR1Q06787 632 aaKnown RBP eCLIP12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 HDAC1Q13547 482 aaPredicted RBP12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 FKBP1CQ5VVH2 108 aa12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 TMED8Q6PL24 325 aaPredicted RBP12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 C2orf69Q8N8R5 385 aa12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 HHIPL1Q96JK4 782 aa12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 DEFB129Q9H1M3 183 aa12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 ZNF408Q9H9D4 720 aa12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 GBA2Q9HCG7 927 aaPredicted RBP12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 TLR7Q9NYK1 1049 aaKnown RBP12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 ZNF70Q9UC06 446 aaPredicted RBP12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 TLL2Q9Y6L7 1015 aa12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 AKAP11Q9UKA4 1901 aa12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 CNTNAP1P78357 1384 aa12.91□□□□□ -0.34
MTHFD1-214ENST00000556771 CLRN2A0PK11 232 aa12.9□□□□□ -0.34
MTHFD1-214ENST00000556771 LDHCP07864 332 aa12.9□□□□□ -0.34
MTHFD1-214ENST00000556771 HTRA3P83110 453 aa12.9□□□□□ -0.34
MTHFD1-214ENST00000556771 APOBEC3HQ6NTF7 200 aaKnown RBP12.9□□□□□ -0.34
MTHFD1-214ENST00000556771 SAPCD2Q86UD0 394 aa12.9□□□□□ -0.34
MTHFD1-214ENST00000556771 IFNLR1Q8IU57 520 aaPredicted RBP12.9□□□□□ -0.34
MTHFD1-214ENST00000556771 TDRD3Q9H7E2 651 aaKnown RBP12.9□□□□□ -0.34
MTHFD1-214ENST00000556771 VEZTQ9HBM0 779 aa12.9□□□□□ -0.34
MTHFD1-214ENST00000556771 LRP2BPQ9P2M1 347 aa12.9□□□□□ -0.34
MTHFD1-214ENST00000556771 DAGLAQ9Y4D2 1042 aa12.9□□□□□ -0.34
MTHFD1-214ENST00000556771 PCDHAC2Q9Y5I4 1007 aa12.9□□□□□ -0.34
MTHFD1-214ENST00000556771 GAKO14976 1311 aa12.89□□□□□ -0.35
MTHFD1-214ENST00000556771 PAPPA2Q9BXP8 1791 aa12.89□□□□□ -0.35
MTHFD1-214ENST00000556771 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
MTHFD1-214ENST00000556771 ECE1P42892 770 aa12.89□□□□□ -0.35
MTHFD1-214ENST00000556771 DIXDC1Q155Q3 683 aa12.89□□□□□ -0.35
MTHFD1-214ENST00000556771 DEFB115Q30KQ5 88 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms