RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 USP5P45974 858 aa6.24□□□□□ -1.41
ATXN3-241ENST00000556374 CABP4P57796 275 aa6.24□□□□□ -1.41
ATXN3-241ENST00000556374 PIP4K2BP78356 416 aa6.24□□□□□ -1.41
ATXN3-241ENST00000556374 NOM1Q5C9Z4 860 aaKnown RBP6.24□□□□□ -1.41
ATXN3-241ENST00000556374 COL13A1Q5TAT6 717 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-241ENST00000556374 CAPN12Q6ZSI9 719 aa6.24□□□□□ -1.41
ATXN3-241ENST00000556374 ZNF438Q7Z4V0 828 aa6.24□□□□□ -1.41
ATXN3-241ENST00000556374 TTC16Q8NEE8 873 aa6.24□□□□□ -1.41
ATXN3-241ENST00000556374 KRTAP9-9Q9BYP9 154 aa6.24□□□□□ -1.41
ATXN3-241ENST00000556374 KRTAP9-4Q9BYQ2 154 aa6.24□□□□□ -1.41
ATXN3-241ENST00000556374 C9orf84Q5VXU9 1444 aa6.24□□□□□ -1.41
ATXN3-241ENST00000556374 H3BRJ5 948 aa6.23□□□□□ -1.41
ATXN3-241ENST00000556374 LINC01387J3KSC0 135 aa6.23□□□□□ -1.41
ATXN3-241ENST00000556374 RASSF4Q9H2L5 321 aa6.23□□□□□ -1.41
ATXN3-241ENST00000556374 SEC31BQ9NQW1 1179 aa6.23□□□□□ -1.41
ATXN3-241ENST00000556374 HIF3AQ9Y2N7 669 aa6.23□□□□□ -1.41
ATXN3-241ENST00000556374 ATP10BO94823 1461 aa6.22□□□□□ -1.41
ATXN3-241ENST00000556374 MYO3AQ8NEV4 1616 aa6.22□□□□□ -1.41
ATXN3-241ENST00000556374 RAPGEF6Q8TEU7 1601 aa6.22□□□□□ -1.41
ATXN3-241ENST00000556374 MEGF11A6BM72 1044 aa6.22□□□□□ -1.41
ATXN3-241ENST00000556374 IGLV1-40P01703 118 aa6.22□□□□□ -1.41
ATXN3-241ENST00000556374 SSFA2P28290 1259 aa6.22□□□□□ -1.41
ATXN3-241ENST00000556374 HSPA1LP34931 641 aa6.22□□□□□ -1.41
ATXN3-241ENST00000556374 ATP11AP98196 1134 aa6.22□□□□□ -1.41
ATXN3-241ENST00000556374 MLECQ14165 292 aa6.22□□□□□ -1.41
ATXN3-241ENST00000556374 ANKRD34AQ69YU3 496 aa6.22□□□□□ -1.41
ATXN3-241ENST00000556374 TMEM102Q8N9M5 508 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-241ENST00000556374 GALNT11Q8NCW6 608 aa6.22□□□□□ -1.41
ATXN3-241ENST00000556374 FAM46AQ96IP4 442 aaKnown RBP6.22□□□□□ -1.41
ATXN3-241ENST00000556374 POP1Q99575 1024 aaKnown RBP6.22□□□□□ -1.41
ATXN3-241ENST00000556374 SLAIN2Q9P270 581 aa6.22□□□□□ -1.41
ATXN3-241ENST00000556374 LRRC9Q6ZRR7 1453 aa6.22□□□□□ -1.41
ATXN3-241ENST00000556374 PDGFAP04085 211 aa6.21□□□□□ -1.42
ATXN3-241ENST00000556374 GLB1P16278 677 aa6.21□□□□□ -1.42
ATXN3-241ENST00000556374 CES1P23141 567 aa6.21□□□□□ -1.42
ATXN3-241ENST00000556374 ARL4DP49703 201 aa6.21□□□□□ -1.42
ATXN3-241ENST00000556374 SF3B2Q13435 895 aaKnown RBP6.21□□□□□ -1.42
ATXN3-241ENST00000556374 INTS5Q6P9B9 1019 aaKnown RBP6.21□□□□□ -1.42
ATXN3-241ENST00000556374 SOX17Q9H6I2 414 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-241ENST00000556374 TMEM63CQ9P1W3 806 aa6.21□□□□□ -1.42
ATXN3-241ENST00000556374 STOML1Q9UBI4 398 aa6.21□□□□□ -1.42
ATXN3-241ENST00000556374 REREQ9P2R6 1566 aa6.21□□□□□ -1.42
ATXN3-241ENST00000556374 POLR1AO95602 1720 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-241ENST00000556374 ZNF335Q9H4Z2 1342 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-241ENST00000556374 ALKQ9UM73 1620 aa6.21□□□□□ -1.42
ATXN3-241ENST00000556374 MROH2AA6NES4 1674 aa6.2□□□□□ -1.42
ATXN3-241ENST00000556374 NFKBIEO00221 500 aa6.2□□□□□ -1.42
ATXN3-241ENST00000556374 FAM13AO94988 1023 aa6.2□□□□□ -1.42
ATXN3-241ENST00000556374 ALX3O95076 343 aa6.2□□□□□ -1.42
ATXN3-241ENST00000556374 CD97P48960 835 aa6.2□□□□□ -1.42
ATXN3-241ENST00000556374 CEBPAP49715 358 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-241ENST00000556374 DUOXA2Q1HG44 320 aa6.2□□□□□ -1.42
ATXN3-241ENST00000556374 ACAD11Q709F0 780 aa6.2□□□□□ -1.42
ATXN3-241ENST00000556374 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
ATXN3-241ENST00000556374 UBL7Q96S82 380 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-241ENST00000556374 RNF208Q9H0X6 261 aa6.2□□□□□ -1.42
ATXN3-241ENST00000556374 GOLGA2P5Q9HBQ8 144 aa6.2□□□□□ -1.42
ATXN3-241ENST00000556374 DZANK1Q9NVP4 752 aa6.2□□□□□ -1.42
ATXN3-241ENST00000556374 ATP10AO60312 1499 aa6.2□□□□□ -1.42
ATXN3-241ENST00000556374 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.2□□□□□ -1.42
ATXN3-241ENST00000556374 DIP2CQ9Y2E4 1556 aa6.19□□□□□ -1.42
ATXN3-241ENST00000556374 FMN1Q68DA7 1419 aa6.19□□□□□ -1.42
ATXN3-241ENST00000556374 SETD5Q9C0A6 1442 aa6.19□□□□□ -1.42
ATXN3-241ENST00000556374 TMEM88BA6NKF7 163 aa6.19□□□□□ -1.42
ATXN3-241ENST00000556374 KIAA1324LA8MWY0 1029 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-241ENST00000556374 EDN3P14138 238 aa6.19□□□□□ -1.42
ATXN3-241ENST00000556374 EIF1AXP47813 144 aaKnown RBP6.19□□□□□ -1.42
ATXN3-241ENST00000556374 CLEC10AQ8IUN9 316 aa6.19□□□□□ -1.42
ATXN3-241ENST00000556374 ARMC10Q8N2F6 343 aa6.19□□□□□ -1.42
ATXN3-241ENST00000556374 EDEM1Q92611 657 aa6.19□□□□□ -1.42
ATXN3-241ENST00000556374 MYRFLQ96LU7 910 aa6.19□□□□□ -1.42
ATXN3-241ENST00000556374 LACRTQ9GZZ8 138 aa6.19□□□□□ -1.42
ATXN3-241ENST00000556374 SEPT3Q9UH03 358 aa6.19□□□□□ -1.42
ATXN3-241ENST00000556374 PLA2R1Q13018 1463 aa6.19□□□□□ -1.42
ATXN3-241ENST00000556374 CPS1P31327 1500 aa6.19□□□□□ -1.42
ATXN3-241ENST00000556374 RAB3GAP2Q9H2M9 1393 aa6.18□□□□□ -1.42
ATXN3-241ENST00000556374 ABCA6Q8N139 1617 aa6.18□□□□□ -1.42
ATXN3-241ENST00000556374 TCOF1Q13428 1488 aaKnown RBP6.18□□□□□ -1.42
ATXN3-241ENST00000556374 PDE2AO00408 941 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-241ENST00000556374 COBLO75128 1261 aa6.18□□□□□ -1.42
ATXN3-241ENST00000556374 CYP2E1P05181 493 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-241ENST00000556374 EPHA1P21709 976 aa6.18□□□□□ -1.42
ATXN3-241ENST00000556374 ITGAEP38570 1179 aa6.18□□□□□ -1.42
ATXN3-241ENST00000556374 CPSF6Q16630 551 aaKnown RBP eCLIP6.18□□□□□ -1.42
ATXN3-241ENST00000556374 RNF43Q68DV7 783 aa6.18□□□□□ -1.42
ATXN3-241ENST00000556374 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-241ENST00000556374 KIAA1211Q6ZU35 1233 aa6.18□□□□□ -1.42
ATXN3-241ENST00000556374 C1orf127Q8N9H9 656 aa6.18□□□□□ -1.42
ATXN3-241ENST00000556374 SNX29Q8TEQ0 813 aa6.18□□□□□ -1.42
ATXN3-241ENST00000556374 BSNDQ8WZ55 320 aa6.18□□□□□ -1.42
ATXN3-241ENST00000556374 FAM83CQ9BQN1 747 aa6.18□□□□□ -1.42
ATXN3-241ENST00000556374 CNTN3Q9P232 1028 aa6.18□□□□□ -1.42
ATXN3-241ENST00000556374 SOX13Q9UN79 622 aa6.18□□□□□ -1.42
ATXN3-241ENST00000556374 KDM5CP41229 1560 aa6.18□□□□□ -1.42
ATXN3-241ENST00000556374 CEP170BQ9Y4F5 1589 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-241ENST00000556374 RNF17Q9BXT8 1623 aaKnown RBP6.17□□□□□ -1.42
ATXN3-241ENST00000556374 MYO5CQ9NQX4 1742 aa6.17□□□□□ -1.42
ATXN3-241ENST00000556374 AGLP35573 1532 aa6.17□□□□□ -1.42
ATXN3-241ENST00000556374 EHBP1L1Q8N3D4 1523 aa6.17□□□□□ -1.42
ATXN3-241ENST00000556374 ARID3CA6NKF2 412 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms