RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 FAM83CQ9BQN1 747 aa9.62□□□□□ -0.87
PRPF39-209ENST00000556353 NRSN2Q9GZP1 204 aa9.62□□□□□ -0.87
PRPF39-209ENST00000556353 ABCB6Q9NP58 842 aa9.62□□□□□ -0.87
PRPF39-209ENST00000556353 HYAL3O43820 417 aaPredicted RBP9.61□□□□□ -0.87
PRPF39-209ENST00000556353 B3GALT4O96024 378 aa9.61□□□□□ -0.87
PRPF39-209ENST00000556353 KCNA1Q09470 495 aa9.61□□□□□ -0.87
PRPF39-209ENST00000556353 POU4F3Q15319 338 aa9.61□□□□□ -0.87
PRPF39-209ENST00000556353 HP1BP3Q5SSJ5 553 aaPredicted RBP9.61□□□□□ -0.87
PRPF39-209ENST00000556353 RNF43Q68DV7 783 aa9.61□□□□□ -0.87
PRPF39-209ENST00000556353 EPS8L3Q8TE67 593 aaKnown RBP9.61□□□□□ -0.87
PRPF39-209ENST00000556353 ZFYVE1Q9HBF4 777 aa9.61□□□□□ -0.87
PRPF39-209ENST00000556353 IVNS1ABPQ9Y6Y0 642 aa9.61□□□□□ -0.87
PRPF39-209ENST00000556353 TMEM238LA0A1B0GVL6 79 aa9.6□□□□□ -0.87
PRPF39-209ENST00000556353 TIAF1O95411 115 aa9.6□□□□□ -0.87
PRPF39-209ENST00000556353 MAOBP27338 520 aa9.6□□□□□ -0.87
PRPF39-209ENST00000556353 DBNDD2Q9BQY9 259 aa9.6□□□□□ -0.87
PRPF39-209ENST00000556353 NLRP2Q9NX02 1062 aa9.6□□□□□ -0.87
PRPF39-209ENST00000556353 MAP4P27816 1152 aaKnown RBP9.59□□□□□ -0.87
PRPF39-209ENST00000556353 GRM2Q14416 872 aa9.59□□□□□ -0.87
PRPF39-209ENST00000556353 NBPF11Q86T75 865 aa9.59□□□□□ -0.87
PRPF39-209ENST00000556353 CORO1BQ9BR76 489 aa9.59□□□□□ -0.87
PRPF39-209ENST00000556353 RXRBP28702 533 aa9.58□□□□□ -0.88
PRPF39-209ENST00000556353 PLCB3Q01970 1234 aa9.58□□□□□ -0.88
PRPF39-209ENST00000556353 SGO2Q562F6 1265 aa9.58□□□□□ -0.88
PRPF39-209ENST00000556353 RPS26P11Q5JNZ5 115 aaPredicted RBP9.58□□□□□ -0.88
PRPF39-209ENST00000556353 TRIM56Q9BRZ2 755 aaKnown RBP9.58□□□□□ -0.88
PRPF39-209ENST00000556353 PPP4R2Q9NY27 417 aa9.58□□□□□ -0.88
PRPF39-209ENST00000556353 TREHO43280 583 aa9.57□□□□□ -0.88
PRPF39-209ENST00000556353 DRD2P14416 443 aa9.57□□□□□ -0.88
PRPF39-209ENST00000556353 USP11P51784 963 aa9.57□□□□□ -0.88
PRPF39-209ENST00000556353 SOX4Q06945 474 aaPredicted RBP9.57□□□□□ -0.88
PRPF39-209ENST00000556353 DSC3Q14574 896 aa9.57□□□□□ -0.88
PRPF39-209ENST00000556353 ZDHHC13Q8IUH4 622 aa9.57□□□□□ -0.88
PRPF39-209ENST00000556353 GLIS3Q8NEA6 775 aa9.57□□□□□ -0.88
PRPF39-209ENST00000556353 PNMA6FA0A0J9YX94 578 aa9.56□□□□□ -0.88
PRPF39-209ENST00000556353 CTSBP07858 339 aa9.56□□□□□ -0.88
PRPF39-209ENST00000556353 AP3B2Q13367 1082 aa9.56□□□□□ -0.88
PRPF39-209ENST00000556353 PI16Q6UXB8 463 aa9.56□□□□□ -0.88
PRPF39-209ENST00000556353 DTHD1Q6ZMT9 781 aa9.56□□□□□ -0.88
PRPF39-209ENST00000556353 ZSCAN29Q8IWY8 852 aaPredicted RBP9.56□□□□□ -0.88
PRPF39-209ENST00000556353 PCMTD2Q9NV79 361 aa9.56□□□□□ -0.88
PRPF39-209ENST00000556353 TGFB1P01137 390 aa9.55□□□□□ -0.88
PRPF39-209ENST00000556353 ADH5P11766 374 aa9.55□□□□□ -0.88
PRPF39-209ENST00000556353 SSTR4P31391 388 aa9.55□□□□□ -0.88
PRPF39-209ENST00000556353 ENOX2Q16206 610 aaKnown RBP9.55□□□□□ -0.88
PRPF39-209ENST00000556353 C2CD4AQ8NCU7 369 aaPredicted RBP9.55□□□□□ -0.88
PRPF39-209ENST00000556353 TRAIPQ9BWF2 469 aa9.55□□□□□ -0.88
PRPF39-209ENST00000556353 RAD18Q9NS91 495 aa9.55□□□□□ -0.88
PRPF39-209ENST00000556353 FCGRTP55899 365 aa9.54□□□□□ -0.88
PRPF39-209ENST00000556353 YIPF2Q9BWQ6 316 aa9.54□□□□□ -0.88
PRPF39-209ENST00000556353 BCO2Q9BYV7 579 aa9.54□□□□□ -0.88
PRPF39-209ENST00000556353 FAM95CA0A1B0GW59 222 aa9.53□□□□□ -0.88
PRPF39-209ENST00000556353 COBLO75128 1261 aa9.53□□□□□ -0.88
PRPF39-209ENST00000556353 ECEL1O95672 775 aa9.53□□□□□ -0.88
PRPF39-209ENST00000556353 XRCC5P13010 732 aaKnown RBP9.53□□□□□ -0.88
PRPF39-209ENST00000556353 GRIK1P39086 918 aa9.53□□□□□ -0.88
PRPF39-209ENST00000556353 CD97P48960 835 aa9.53□□□□□ -0.88
PRPF39-209ENST00000556353 ZNF157P51786 506 aaPredicted RBP9.53□□□□□ -0.88
PRPF39-209ENST00000556353 PDE3AQ14432 1141 aa9.53□□□□□ -0.88
PRPF39-209ENST00000556353 AKAP4Q5JQC9 854 aa9.53□□□□□ -0.88
PRPF39-209ENST00000556353 SHKBP1Q8TBC3 707 aa9.53□□□□□ -0.88
PRPF39-209ENST00000556353 FBLIM1Q8WUP2 373 aa9.53□□□□□ -0.88
PRPF39-209ENST00000556353 PATL2C9JE40 543 aaKnown RBP9.52□□□□□ -0.89
PRPF39-209ENST00000556353 FAAP100Q0VG06 881 aa9.52□□□□□ -0.89
PRPF39-209ENST00000556353 NFKBIBQ15653 356 aa9.52□□□□□ -0.89
PRPF39-209ENST00000556353 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.52□□□□□ -0.89
PRPF39-209ENST00000556353 CDPF1Q6NVV7 123 aa9.52□□□□□ -0.89
PRPF39-209ENST00000556353 PAOXQ6QHF9 649 aa9.52□□□□□ -0.89
PRPF39-209ENST00000556353 GIMAP7Q8NHV1 300 aa9.52□□□□□ -0.89
PRPF39-209ENST00000556353 ASB16Q96NS5 453 aa9.52□□□□□ -0.89
PRPF39-209ENST00000556353 MAPK8P45983 427 aa9.51□□□□□ -0.89
PRPF39-209ENST00000556353 DYMQ7RTS9 669 aa9.51□□□□□ -0.89
PRPF39-209ENST00000556353 MFSD14AQ96MC6 490 aa9.51□□□□□ -0.89
PRPF39-209ENST00000556353 GPN3Q9UHW5 284 aaPredicted RBP9.51□□□□□ -0.89
PRPF39-209ENST00000556353 AP4E1Q9UPM8 1137 aa9.51□□□□□ -0.89
PRPF39-209ENST00000556353 ACTL7BQ9Y614 415 aa9.51□□□□□ -0.89
PRPF39-209ENST00000556353 WDR64B1ANS9 1081 aa9.5□□□□□ -0.89
PRPF39-209ENST00000556353 AOC2O75106 756 aa9.5□□□□□ -0.89
PRPF39-209ENST00000556353 PPP2R3AQ06190 1150 aa9.5□□□□□ -0.89
PRPF39-209ENST00000556353 INTS5Q6P9B9 1019 aaKnown RBP9.5□□□□□ -0.89
PRPF39-209ENST00000556353 NXPE4Q6UWF7 544 aa9.5□□□□□ -0.89
PRPF39-209ENST00000556353 PRR19A6NJB7 356 aa9.49□□□□□ -0.89
PRPF39-209ENST00000556353 RAB6AP20340 208 aa9.49□□□□□ -0.89
PRPF39-209ENST00000556353 FMR1Q06787 632 aaKnown RBP eCLIP9.49□□□□□ -0.89
PRPF39-209ENST00000556353 FBXL6Q8N531 539 aa9.49□□□□□ -0.89
PRPF39-209ENST00000556353 FBF1Q8TES7 1133 aa9.49□□□□□ -0.89
PRPF39-209ENST00000556353 EZH1Q92800 747 aaPredicted RBP9.49□□□□□ -0.89
PRPF39-209ENST00000556353 ATG3Q9NT62 314 aa9.49□□□□□ -0.89
PRPF39-209ENST00000556353 TMEM39AQ9NV64 488 aa9.49□□□□□ -0.89
PRPF39-209ENST00000556353 HNRNPUQ00839 825 aaKnown RBP eCLIP9.48□□□□□ -0.89
PRPF39-209ENST00000556353 WDR18Q9BV38 432 aa9.48□□□□□ -0.89
PRPF39-209ENST00000556353 AKAP2Q9Y2D5 859 aa9.48□□□□□ -0.89
PRPF39-209ENST00000556353 SYNGAP1Q96PV0 1343 aa9.48□□□□□ -0.89
PRPF39-209ENST00000556353 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.47□□□□□ -0.89
PRPF39-209ENST00000556353 KIAA1324LA8MWY0 1029 aaPredicted RBP9.47□□□□□ -0.89
PRPF39-209ENST00000556353 MED26O95402 600 aa9.47□□□□□ -0.89
PRPF39-209ENST00000556353 ASPAP45381 313 aa9.47□□□□□ -0.89
PRPF39-209ENST00000556353 MAP7Q14244 749 aa9.47□□□□□ -0.89
PRPF39-209ENST00000556353 ZC3H12CQ9C0D7 883 aaKnown RBP9.47□□□□□ -0.89
PRPF39-209ENST00000556353 F13BP05160 661 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms