RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 BOLA2Q9H3K6 86 aa12.23□□□□□ -0.45
MTHFD1-213ENST00000556284 CACNA1SQ13698 1873 aa12.23□□□□□ -0.45
MTHFD1-213ENST00000556284 A0A1B0GUL6 1792 aa12.23□□□□□ -0.45
MTHFD1-213ENST00000556284 MCAMP43121 646 aa12.22□□□□□ -0.45
MTHFD1-213ENST00000556284 RASGRF1Q13972 1273 aa12.22□□□□□ -0.45
MTHFD1-213ENST00000556284 DOK7Q18PE1 504 aa12.22□□□□□ -0.45
MTHFD1-213ENST00000556284 SPATA5Q8NB90 893 aa12.22□□□□□ -0.45
MTHFD1-213ENST00000556284 HMG20BQ9P0W2 317 aa12.22□□□□□ -0.45
MTHFD1-213ENST00000556284 ARFGEF1Q9Y6D6 1849 aa12.22□□□□□ -0.45
MTHFD1-213ENST00000556284 POTEFA5A3E0 1075 aa12.21□□□□□ -0.45
MTHFD1-213ENST00000556284 ECE2O60344 883 aa12.21□□□□□ -0.45
MTHFD1-213ENST00000556284 LMNB1P20700 586 aa12.21□□□□□ -0.45
MTHFD1-213ENST00000556284 SCARF1Q14162 830 aa12.21□□□□□ -0.45
MTHFD1-213ENST00000556284 BMP2KLQ5H9B9 411 aa12.21□□□□□ -0.45
MTHFD1-213ENST00000556284 TICAM2Q86XR7 235 aa12.21□□□□□ -0.45
MTHFD1-213ENST00000556284 NIM1KQ8IY84 436 aa12.21□□□□□ -0.45
MTHFD1-213ENST00000556284 WDR66Q8TBY9 1149 aa12.21□□□□□ -0.45
MTHFD1-213ENST00000556284 JDP2Q8WYK2 163 aa12.21□□□□□ -0.45
MTHFD1-213ENST00000556284 IQSEC3Q9UPP2 1182 aaPredicted RBP12.21□□□□□ -0.45
MTHFD1-213ENST00000556284 ARAP2Q8WZ64 1704 aa12.2□□□□□ -0.46
MTHFD1-213ENST00000556284 FAM205AQ6ZU69 1335 aa12.2□□□□□ -0.46
MTHFD1-213ENST00000556284 IGSF3O75054 1194 aa12.2□□□□□ -0.46
MTHFD1-213ENST00000556284 ZAP70P43403 619 aa12.2□□□□□ -0.46
MTHFD1-213ENST00000556284 RASSF7Q02833 373 aa12.2□□□□□ -0.46
MTHFD1-213ENST00000556284 TTF1Q15361 905 aaPredicted RBP12.2□□□□□ -0.46
MTHFD1-213ENST00000556284 CNTROBQ8N137 903 aa12.2□□□□□ -0.46
MTHFD1-213ENST00000556284 DNAJC2Q99543 621 aaKnown RBP12.2□□□□□ -0.46
MTHFD1-213ENST00000556284 DBNDD1Q9H9R9 158 aa12.2□□□□□ -0.46
MTHFD1-213ENST00000556284 SNRKQ9NRH2 765 aa12.2□□□□□ -0.46
MTHFD1-213ENST00000556284 PAG1Q9NWQ8 432 aa12.2□□□□□ -0.46
MTHFD1-213ENST00000556284 ZNRF3Q9ULT6 936 aa12.2□□□□□ -0.46
MTHFD1-213ENST00000556284 FER1L6Q2WGJ9 1857 aa12.19□□□□□ -0.46
MTHFD1-213ENST00000556284 TRIM6-TRIM34B2RNG4 842 aa12.19□□□□□ -0.46
MTHFD1-213ENST00000556284 CYP2E1P05181 493 aaPredicted RBP12.19□□□□□ -0.46
MTHFD1-213ENST00000556284 GSPT1P15170 499 aaKnown RBP12.19□□□□□ -0.46
MTHFD1-213ENST00000556284 CHAF1AQ13111 956 aaPredicted RBP12.19□□□□□ -0.46
MTHFD1-213ENST00000556284 TTLL5Q6EMB2 1281 aa12.19□□□□□ -0.46
MTHFD1-213ENST00000556284 PI16Q6UXB8 463 aa12.19□□□□□ -0.46
MTHFD1-213ENST00000556284 ZGPATQ8N5A5 531 aaKnown RBP12.19□□□□□ -0.46
MTHFD1-213ENST00000556284 TBC1D22AQ8WUA7 517 aa12.19□□□□□ -0.46
MTHFD1-213ENST00000556284 EVI5LQ96CN4 794 aa12.19□□□□□ -0.46
MTHFD1-213ENST00000556284 TMEM121BQ9BXQ6 578 aaPredicted RBP12.19□□□□□ -0.46
MTHFD1-213ENST00000556284 WDR70Q9NW82 654 aa12.19□□□□□ -0.46
MTHFD1-213ENST00000556284 SALL1Q9NSC2 1324 aa12.18□□□□□ -0.46
MTHFD1-213ENST00000556284 USP17L3A6NCW0 530 aa12.18□□□□□ -0.46
MTHFD1-213ENST00000556284 USP17L4A6NCW7 530 aa12.18□□□□□ -0.46
MTHFD1-213ENST00000556284 YDJCA8MPS7 323 aa12.18□□□□□ -0.46
MTHFD1-213ENST00000556284 GOLIM4O00461 696 aa12.18□□□□□ -0.46
MTHFD1-213ENST00000556284 SDSP20132 328 aa12.18□□□□□ -0.46
MTHFD1-213ENST00000556284 PRELPP51888 382 aa12.18□□□□□ -0.46
MTHFD1-213ENST00000556284 FKBP1AP62942 108 aaKnown RBP12.18□□□□□ -0.46
MTHFD1-213ENST00000556284 GTF2IP78347 998 aa12.18□□□□□ -0.46
MTHFD1-213ENST00000556284 LRRFIP1Q32MZ4 808 aaKnown RBP12.18□□□□□ -0.46
MTHFD1-213ENST00000556284 STRIP1Q5VSL9 837 aa12.18□□□□□ -0.46
MTHFD1-213ENST00000556284 SPTY2D1Q68D10 685 aaPredicted RBP12.18□□□□□ -0.46
MTHFD1-213ENST00000556284 USP17L1Q7RTZ2 530 aa12.18□□□□□ -0.46
MTHFD1-213ENST00000556284 RILPL2Q969X0 211 aa12.18□□□□□ -0.46
MTHFD1-213ENST00000556284 FZD9O00144 591 aa12.17□□□□□ -0.46
MTHFD1-213ENST00000556284 MAP4K4O95819 1239 aaPredicted RBP12.17□□□□□ -0.46
MTHFD1-213ENST00000556284 TMED8Q6PL24 325 aaPredicted RBP12.17□□□□□ -0.46
MTHFD1-213ENST00000556284 KBTBD3Q8NAB2 608 aa12.17□□□□□ -0.46
MTHFD1-213ENST00000556284 ANTXR1Q9H6X2 564 aa12.17□□□□□ -0.46
MTHFD1-213ENST00000556284 SUGT1Q9Y2Z0 365 aa12.17□□□□□ -0.46
MTHFD1-213ENST00000556284 NDUFB9Q9Y6M9 179 aa12.17□□□□□ -0.46
MTHFD1-213ENST00000556284 SRCAPQ6ZRS2 3230 aa12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 VIL1P09327 827 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 MAP3K12Q12852 859 aa12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 TNIP1Q15025 636 aa12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 MFSD14BQ5SR56 506 aa12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 DACT2Q5SW24 774 aa12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 CIAPIN1Q6FI81 312 aa12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 TBC1D9Q6ZT07 1266 aa12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 ERICH6Q7L0X2 663 aa12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 EDC3Q96F86 508 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 FSD1Q9BTV5 496 aa12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 KCNQ5Q9NR82 932 aa12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 LRP2BPQ9P2M1 347 aa12.16□□□□□ -0.46
MTHFD1-213ENST00000556284 COL1A1P02452 1464 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-213ENST00000556284 HIP1O00291 1037 aa12.15□□□□□ -0.46
MTHFD1-213ENST00000556284 RAD17O75943 681 aa12.15□□□□□ -0.46
MTHFD1-213ENST00000556284 LDHBP07195 334 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-213ENST00000556284 ZFYP08048 801 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-213ENST00000556284 EIF6P56537 245 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-213ENST00000556284 CXCL9Q07325 125 aa12.15□□□□□ -0.46
MTHFD1-213ENST00000556284 C9orf131Q5VYM1 1079 aa12.15□□□□□ -0.46
MTHFD1-213ENST00000556284 ZSCAN25Q6NSZ9 544 aa12.15□□□□□ -0.46
MTHFD1-213ENST00000556284 PIH1D3Q9NQM4 214 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-213ENST00000556284 RNF181Q9P0P0 153 aa12.15□□□□□ -0.46
MTHFD1-213ENST00000556284 ABCF2Q9UG63 623 aa12.15□□□□□ -0.46
MTHFD1-213ENST00000556284 JAG2Q9Y219 1238 aa12.15□□□□□ -0.46
MTHFD1-213ENST00000556284 MYO3BQ8WXR4 1341 aa12.14□□□□□ -0.47
MTHFD1-213ENST00000556284 COL4A5P29400 1685 aa12.14□□□□□ -0.47
MTHFD1-213ENST00000556284 PSMD14O00487 310 aa12.14□□□□□ -0.47
MTHFD1-213ENST00000556284 IDH1O75874 414 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-213ENST00000556284 RSBN1LQ6PCB5 846 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-213ENST00000556284 AGBL3Q8NEM8 1001 aa12.14□□□□□ -0.47
MTHFD1-213ENST00000556284 CRISPLD2Q9H0B8 497 aa12.14□□□□□ -0.47
MTHFD1-213ENST00000556284 RAI14Q9P0K7 980 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms