RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 TGFB2P61812 414 aa12.32□□□□□ -0.44
GTF2A1-204ENST00000556268 CLDN10P78369 228 aa12.32□□□□□ -0.44
GTF2A1-204ENST00000556268 EIF4A2Q14240 407 aaKnown RBP12.32□□□□□ -0.44
GTF2A1-204ENST00000556268 DBN1Q16643 649 aa12.32□□□□□ -0.44
GTF2A1-204ENST00000556268 TRAPPC3LQ5T215 181 aa12.32□□□□□ -0.44
GTF2A1-204ENST00000556268 NLGN1Q8N2Q7 840 aa12.32□□□□□ -0.44
GTF2A1-204ENST00000556268 CNTNAP3BQ96NU0 1288 aa12.32□□□□□ -0.44
GTF2A1-204ENST00000556268 CNTNAP3Q9BZ76 1288 aa12.32□□□□□ -0.44
GTF2A1-204ENST00000556268 GPAMQ9HCL2 828 aa12.32□□□□□ -0.44
GTF2A1-204ENST00000556268 MKRN1Q9UHC7 482 aaKnown RBP12.32□□□□□ -0.44
GTF2A1-204ENST00000556268 ITGB4P16144 1822 aa12.32□□□□□ -0.44
GTF2A1-204ENST00000556268 A0A1B0GTH6 734 aa12.31□□□□□ -0.44
GTF2A1-204ENST00000556268 F11P03951 625 aa12.31□□□□□ -0.44
GTF2A1-204ENST00000556268 PLA2G4AP47712 749 aa12.31□□□□□ -0.44
GTF2A1-204ENST00000556268 TRIM26Q12899 539 aaPredicted RBP12.31□□□□□ -0.44
GTF2A1-204ENST00000556268 PPP1R12CQ9BZL4 782 aa12.31□□□□□ -0.44
GTF2A1-204ENST00000556268 USP3Q9Y6I4 520 aa12.31□□□□□ -0.44
GTF2A1-204ENST00000556268 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
GTF2A1-204ENST00000556268 UBR3Q6ZT12 1888 aa12.3□□□□□ -0.44
GTF2A1-204ENST00000556268 A6NJY4 79 aa12.3□□□□□ -0.44
GTF2A1-204ENST00000556268 MMP10P09238 476 aa12.3□□□□□ -0.44
GTF2A1-204ENST00000556268 HSPA6P17066 643 aa12.3□□□□□ -0.44
GTF2A1-204ENST00000556268 ATP1A2P50993 1020 aa12.3□□□□□ -0.44
GTF2A1-204ENST00000556268 MTFR1Q15390 333 aa12.3□□□□□ -0.44
GTF2A1-204ENST00000556268 TPCN2Q8NHX9 752 aa12.3□□□□□ -0.44
GTF2A1-204ENST00000556268 GMCL1Q96IK5 515 aa12.3□□□□□ -0.44
GTF2A1-204ENST00000556268 DCAF5Q96JK2 942 aa12.3□□□□□ -0.44
GTF2A1-204ENST00000556268 GTF3C3Q9Y5Q9 886 aa12.3□□□□□ -0.44
GTF2A1-204ENST00000556268 PKD1L3Q7Z443 1732 aa12.3□□□□□ -0.44
GTF2A1-204ENST00000556268 H7C1W4 665 aa12.29□□□□□ -0.44
GTF2A1-204ENST00000556268 RPS6KA4O75676 772 aa12.29□□□□□ -0.44
GTF2A1-204ENST00000556268 HSP90AB1P08238 724 aaKnown RBP12.29□□□□□ -0.44
GTF2A1-204ENST00000556268 OGFOD1Q8N543 542 aa12.29□□□□□ -0.44
GTF2A1-204ENST00000556268 ZSCAN1Q8NBB4 408 aa12.29□□□□□ -0.44
GTF2A1-204ENST00000556268 DNAAF2Q9NVR5 837 aaKnown RBP12.29□□□□□ -0.44
GTF2A1-204ENST00000556268 IQSEC3Q9UPP2 1182 aaPredicted RBP12.29□□□□□ -0.44
GTF2A1-204ENST00000556268 RTCBQ9Y3I0 505 aaKnown RBP12.29□□□□□ -0.44
GTF2A1-204ENST00000556268 BACH1O14867 736 aa12.28□□□□□ -0.44
GTF2A1-204ENST00000556268 ZBTB7BO15156 539 aaPredicted RBP12.28□□□□□ -0.44
GTF2A1-204ENST00000556268 PLEKHO1Q53GL0 409 aaPredicted RBP12.28□□□□□ -0.44
GTF2A1-204ENST00000556268 ZNF295-AS1Q8N0V1 137 aa12.28□□□□□ -0.44
GTF2A1-204ENST00000556268 KIF20BQ96Q89 1820 aa12.27□□□□□ -0.44
GTF2A1-204ENST00000556268 A0A0G2JLW4 131 aa12.27□□□□□ -0.45
GTF2A1-204ENST00000556268 GPR25O00155 361 aa12.27□□□□□ -0.45
GTF2A1-204ENST00000556268 THBS1P07996 1170 aa12.27□□□□□ -0.45
GTF2A1-204ENST00000556268 GYS1P13807 737 aa12.27□□□□□ -0.45
GTF2A1-204ENST00000556268 KCNA3P22001 575 aa12.27□□□□□ -0.45
GTF2A1-204ENST00000556268 AMOTQ4VCS5 1084 aa12.27□□□□□ -0.45
GTF2A1-204ENST00000556268 CCDC102BQ68D86 513 aa12.27□□□□□ -0.45
GTF2A1-204ENST00000556268 GTPBP3Q969Y2 492 aaKnown RBP12.27□□□□□ -0.45
GTF2A1-204ENST00000556268 ZNF594Q96JF6 807 aaPredicted RBP12.27□□□□□ -0.45
GTF2A1-204ENST00000556268 NIFKQ9BYG3 293 aaKnown RBP12.27□□□□□ -0.45
GTF2A1-204ENST00000556268 NUCKS1Q9H1E3 243 aaKnown RBP12.27□□□□□ -0.45
GTF2A1-204ENST00000556268 STK17AQ9UEE5 414 aa12.27□□□□□ -0.45
GTF2A1-204ENST00000556268 KDRP35968 1356 aa12.27□□□□□ -0.45
GTF2A1-204ENST00000556268 CDK2AP1O14519 115 aa12.26□□□□□ -0.45
GTF2A1-204ENST00000556268 MSX1P28360 303 aa12.26□□□□□ -0.45
GTF2A1-204ENST00000556268 TNNT2P45379 298 aaPredicted RBP12.26□□□□□ -0.45
GTF2A1-204ENST00000556268 GAS6Q14393 721 aa12.26□□□□□ -0.45
GTF2A1-204ENST00000556268 ZNF526Q8TF50 670 aaPredicted RBP12.26□□□□□ -0.45
GTF2A1-204ENST00000556268 PANK3Q9H999 370 aa12.26□□□□□ -0.45
GTF2A1-204ENST00000556268 WWC3Q9ULE0 1092 aa12.26□□□□□ -0.45
GTF2A1-204ENST00000556268 CNTNAP4Q9C0A0 1308 aa12.26□□□□□ -0.45
GTF2A1-204ENST00000556268 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
GTF2A1-204ENST00000556268 DPEP1P16444 411 aa12.25□□□□□ -0.45
GTF2A1-204ENST00000556268 RFC4P35249 363 aa12.25□□□□□ -0.45
GTF2A1-204ENST00000556268 EPHA4P54764 986 aa12.25□□□□□ -0.45
GTF2A1-204ENST00000556268 LARGE2Q8N3Y3 721 aa12.25□□□□□ -0.45
GTF2A1-204ENST00000556268 DNAJC5GQ8N7S2 189 aa12.25□□□□□ -0.45
GTF2A1-204ENST00000556268 RUBCNLQ9H714 662 aa12.25□□□□□ -0.45
GTF2A1-204ENST00000556268 SCHIP1Q9P0W5 487 aaPredicted RBP12.25□□□□□ -0.45
GTF2A1-204ENST00000556268 MTHFSP49914 203 aa12.24□□□□□ -0.45
GTF2A1-204ENST00000556268 CABP4P57796 275 aa12.24□□□□□ -0.45
GTF2A1-204ENST00000556268 SIX5Q8N196 739 aa12.24□□□□□ -0.45
GTF2A1-204ENST00000556268 CLSPNQ9HAW4 1339 aa12.24□□□□□ -0.45
GTF2A1-204ENST00000556268 CCDC87Q9NVE4 849 aa12.24□□□□□ -0.45
GTF2A1-204ENST00000556268 PXDNLA1KZ92 1463 aa12.23□□□□□ -0.45
GTF2A1-204ENST00000556268 TOMM70O94826 608 aa12.23□□□□□ -0.45
GTF2A1-204ENST00000556268 RASA1P20936 1047 aa12.23□□□□□ -0.45
GTF2A1-204ENST00000556268 LMOD1P29536 600 aaPredicted RBP12.23□□□□□ -0.45
GTF2A1-204ENST00000556268 ARHGAP27Q6ZUM4 889 aa12.23□□□□□ -0.45
GTF2A1-204ENST00000556268 TNS4Q8IZW8 715 aa12.23□□□□□ -0.45
GTF2A1-204ENST00000556268 ZMYND15Q9H091 742 aa12.23□□□□□ -0.45
GTF2A1-204ENST00000556268 BCS1LQ9Y276 419 aa12.23□□□□□ -0.45
GTF2A1-204ENST00000556268 PARP3Q9Y6F1 533 aa12.23□□□□□ -0.45
GTF2A1-204ENST00000556268 KDM6AO15550 1401 aaPredicted RBP12.22□□□□□ -0.45
GTF2A1-204ENST00000556268 C10orf71Q711Q0 1435 aa12.22□□□□□ -0.45
GTF2A1-204ENST00000556268 DKK1O94907 266 aa12.22□□□□□ -0.45
GTF2A1-204ENST00000556268 ATP4AP20648 1035 aa12.22□□□□□ -0.45
GTF2A1-204ENST00000556268 TM4SF1P30408 202 aa12.22□□□□□ -0.45
GTF2A1-204ENST00000556268 FOXK2Q01167 660 aa12.22□□□□□ -0.45
GTF2A1-204ENST00000556268 ZNF530Q6P9A1 599 aaPredicted RBP12.22□□□□□ -0.45
GTF2A1-204ENST00000556268 INTS5Q6P9B9 1019 aaKnown RBP12.22□□□□□ -0.45
GTF2A1-204ENST00000556268 FOXR1Q6PIV2 292 aa12.22□□□□□ -0.45
GTF2A1-204ENST00000556268 AEBP1Q8IUX7 1158 aa12.22□□□□□ -0.45
GTF2A1-204ENST00000556268 PGBD3Q8N328 593 aa12.22□□□□□ -0.45
GTF2A1-204ENST00000556268 ZNF831Q5JPB2 1677 aa12.22□□□□□ -0.45
GTF2A1-204ENST00000556268 CICQ96RK0 1608 aaPredicted RBP12.22□□□□□ -0.45
GTF2A1-204ENST00000556268 PTCD1O75127 700 aaKnown RBP12.21□□□□□ -0.45
GTF2A1-204ENST00000556268 IL13P35225 146 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms