RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 HIBADHP31937 336 aaKnown RBP17.45■□□□□ 0.38
VPS33B-205ENST00000556096 Q6ZUG5 572 aa17.45■□□□□ 0.38
VPS33B-205ENST00000556096 CCDC83Q8IWF9 413 aa17.45■□□□□ 0.38
VPS33B-205ENST00000556096 FBXL16Q8N461 479 aa17.45■□□□□ 0.38
VPS33B-205ENST00000556096 RBM17Q96I25 401 aaKnown RBP17.45■□□□□ 0.38
VPS33B-205ENST00000556096 TCEANC2Q96MN5 208 aa17.45■□□□□ 0.38
VPS33B-205ENST00000556096 SYT17Q9BSW7 474 aa17.45■□□□□ 0.38
VPS33B-205ENST00000556096 AGXT2Q9BYV1 514 aa17.45■□□□□ 0.38
VPS33B-205ENST00000556096 SMC3Q9UQE7 1217 aa17.45■□□□□ 0.38
VPS33B-205ENST00000556096 ZMYM6O95789 1325 aa17.45■□□□□ 0.38
VPS33B-205ENST00000556096 IRS2Q9Y4H2 1338 aa17.45■□□□□ 0.38
VPS33B-205ENST00000556096 ZNF213O14771 459 aa17.44■□□□□ 0.38
VPS33B-205ENST00000556096 C2CD5Q86YS7 1000 aa17.44■□□□□ 0.38
VPS33B-205ENST00000556096 KIF13BQ9NQT8 1826 aa17.44■□□□□ 0.38
VPS33B-205ENST00000556096 LAMA4Q16363 1823 aa17.44■□□□□ 0.38
VPS33B-205ENST00000556096 PATL2C9JE40 543 aaKnown RBP17.44■□□□□ 0.38
VPS33B-205ENST00000556096 GOLGA6L22H0YM25 854 aa17.44■□□□□ 0.38
VPS33B-205ENST00000556096 GNAT2P19087 354 aa17.44■□□□□ 0.38
VPS33B-205ENST00000556096 ST3GAL1Q11201 340 aa17.44■□□□□ 0.38
VPS33B-205ENST00000556096 IQSEC3Q9UPP2 1182 aaPredicted RBP17.44■□□□□ 0.38
VPS33B-205ENST00000556096 CD2APQ9Y5K6 639 aa17.44■□□□□ 0.38
VPS33B-205ENST00000556096 COL1A1P02452 1464 aaPredicted RBP17.44■□□□□ 0.38
VPS33B-205ENST00000556096 KIAA1551Q9HCM1 1747 aa17.43■□□□□ 0.38
VPS33B-205ENST00000556096 BBOX1O75936 387 aa17.43■□□□□ 0.38
VPS33B-205ENST00000556096 PDIA4P13667 645 aaKnown RBP17.43■□□□□ 0.38
VPS33B-205ENST00000556096 PDE6BP35913 854 aa17.43■□□□□ 0.38
VPS33B-205ENST00000556096 TMED8Q6PL24 325 aaPredicted RBP17.43■□□□□ 0.38
VPS33B-205ENST00000556096 C15orf52Q6ZUT6 534 aaKnown RBP17.43■□□□□ 0.38
VPS33B-205ENST00000556096 CRAMP1Q96RY5 1269 aa17.43■□□□□ 0.38
VPS33B-205ENST00000556096 XDHP47989 1333 aa17.43■□□□□ 0.38
VPS33B-205ENST00000556096 WDR33Q9C0J8 1336 aaKnown RBP17.43■□□□□ 0.38
VPS33B-205ENST00000556096 LRRC37AA6NMS7 1700 aa17.42■□□□□ 0.38
VPS33B-205ENST00000556096 IGSF3O75054 1194 aa17.42■□□□□ 0.38
VPS33B-205ENST00000556096 MBD4O95243 580 aa17.42■□□□□ 0.38
VPS33B-205ENST00000556096 KLRK1P26718 216 aa17.42■□□□□ 0.38
VPS33B-205ENST00000556096 SLC51AQ86UW1 340 aa17.42■□□□□ 0.38
VPS33B-205ENST00000556096 ZNF622Q969S3 477 aaKnown RBP eCLIP17.42■□□□□ 0.387e-6■■■■□ 22.7
VPS33B-205ENST00000556096 GOLGB1Q14789 3259 aaKnown RBP17.42■□□□□ 0.38
VPS33B-205ENST00000556096 DLEC1Q9Y238 1755 aa17.42■□□□□ 0.38
VPS33B-205ENST00000556096 TRAK2O60296 914 aa17.41■□□□□ 0.38
VPS33B-205ENST00000556096 NECAB1Q8N987 351 aa17.41■□□□□ 0.38
VPS33B-205ENST00000556096 ANKIB1Q9P2G1 1089 aa17.41■□□□□ 0.38
VPS33B-205ENST00000556096 ABCF2Q9UG63 623 aa17.41■□□□□ 0.38
VPS33B-205ENST00000556096 WDR19Q8NEZ3 1342 aa17.41■□□□□ 0.38
VPS33B-205ENST00000556096 APPP05067 770 aa17.41■□□□□ 0.38
VPS33B-205ENST00000556096 SRGNP10124 158 aa17.41■□□□□ 0.38
VPS33B-205ENST00000556096 GJB2P29033 226 aa17.41■□□□□ 0.38
VPS33B-205ENST00000556096 HAND2P61296 217 aa17.41■□□□□ 0.38
VPS33B-205ENST00000556096 GSE1Q14687 1217 aa17.41■□□□□ 0.38
VPS33B-205ENST00000556096 SKOR2Q2VWA4 1001 aaPredicted RBP17.41■□□□□ 0.38
VPS33B-205ENST00000556096 TMC4Q7Z404 712 aa17.41■□□□□ 0.38
VPS33B-205ENST00000556096 NCOA7Q8NI08 942 aa17.41■□□□□ 0.38
VPS33B-205ENST00000556096 RAI14Q9P0K7 980 aa17.41■□□□□ 0.38
VPS33B-205ENST00000556096 H0YIN7 160 aa17.4■□□□□ 0.38
VPS33B-205ENST00000556096 KCNA3P22001 575 aa17.4■□□□□ 0.38
VPS33B-205ENST00000556096 CYP7A1P22680 504 aa17.4■□□□□ 0.38
VPS33B-205ENST00000556096 FGD1P98174 961 aa17.4■□□□□ 0.38
VPS33B-205ENST00000556096 IFNL3Q8IZI9 196 aa17.4■□□□□ 0.38
VPS33B-205ENST00000556096 BRF1Q92994 677 aa17.4■□□□□ 0.38
VPS33B-205ENST00000556096 ARMT1Q9H993 441 aa17.4■□□□□ 0.38
VPS33B-205ENST00000556096 GSG1L2A8MUP6 293 aa17.39■□□□□ 0.37
VPS33B-205ENST00000556096 NPR1P16066 1061 aa17.39■□□□□ 0.37
VPS33B-205ENST00000556096 SYT1P21579 422 aa17.39■□□□□ 0.37
VPS33B-205ENST00000556096 ATP2B4P23634 1241 aa17.39■□□□□ 0.37
VPS33B-205ENST00000556096 TXNRD3Q86VQ6 643 aa17.39■□□□□ 0.37
VPS33B-205ENST00000556096 MB21D2Q8IYB1 491 aaPredicted RBP17.39■□□□□ 0.37
VPS33B-205ENST00000556096 GTF3C6Q969F1 213 aa17.39■□□□□ 0.37
VPS33B-205ENST00000556096 ZNF219Q9P2Y4 722 aaPredicted RBP17.39■□□□□ 0.37
VPS33B-205ENST00000556096 STX6O43752 255 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 PFKFB2O60825 505 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 MCM5P33992 734 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 EVCP57679 992 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 TGFB2P61812 414 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 LCORLQ8N3X6 602 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 CHMP4CQ96CF2 233 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 ZNF274Q96GC6 653 aaPredicted RBP17.38■□□□□ 0.37
VPS33B-205ENST00000556096 NACAP1Q9BZK3 213 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 NBPF3Q9H094 633 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 PODXL2Q9NZ53 605 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 GPSM2P81274 684 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 TRDNQ13061 729 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 MCTP1Q6DN14 999 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 RALYLQ86SE5 291 aaKnown RBP17.38■□□□□ 0.37
VPS33B-205ENST00000556096 LRRC2Q9BYS8 371 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 NAPBQ9H115 298 aa17.38■□□□□ 0.37
VPS33B-205ENST00000556096 EPB41L4AQ9HCS5 686 aaPredicted RBP17.38■□□□□ 0.37
VPS33B-205ENST00000556096 LTBP1Q14766 1721 aa17.37■□□□□ 0.37
VPS33B-205ENST00000556096 SLX4Q8IY92 1834 aa17.37■□□□□ 0.37
VPS33B-205ENST00000556096 MAGEB6P1A0A0J9YX57 407 aa17.37■□□□□ 0.37
VPS33B-205ENST00000556096 ZSCAN22P10073 491 aaPredicted RBP17.37■□□□□ 0.37
VPS33B-205ENST00000556096 NAA16Q6N069 864 aaPredicted RBP17.37■□□□□ 0.37
VPS33B-205ENST00000556096 TDRD7Q8NHU6 1098 aaKnown RBP17.37■□□□□ 0.37
VPS33B-205ENST00000556096 MASTLQ96GX5 879 aa17.37■□□□□ 0.37
VPS33B-205ENST00000556096 LLPHQ9BRT6 129 aaKnown RBP17.37■□□□□ 0.37
VPS33B-205ENST00000556096 SLC4A4Q9Y6R1 1079 aa17.37■□□□□ 0.37
VPS33B-205ENST00000556096 MYH13Q9UKX3 1938 aa17.37■□□□□ 0.37
VPS33B-205ENST00000556096 SALL1Q9NSC2 1324 aa17.37■□□□□ 0.37
VPS33B-205ENST00000556096 PRC1O43663 620 aa17.36■□□□□ 0.37
VPS33B-205ENST00000556096 PDCP20941 246 aa17.36■□□□□ 0.37
VPS33B-205ENST00000556096 STK3Q13188 491 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms