RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 TMC4Q7Z404 712 aa10.94□□□□□ -0.66
PSEN1-215ENST00000556011 PBXIP1Q96AQ6 731 aa10.94□□□□□ -0.66
PSEN1-215ENST00000556011 FAM177BA6PVY3 158 aa10.93□□□□□ -0.66
PSEN1-215ENST00000556011 WDHD1O75717 1129 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-215ENST00000556011 CRY2Q49AN0 593 aa10.93□□□□□ -0.66
PSEN1-215ENST00000556011 LRSAM1Q6UWE0 723 aa10.93□□□□□ -0.66
PSEN1-215ENST00000556011 BMP8AQ7Z5Y6 402 aa10.93□□□□□ -0.66
PSEN1-215ENST00000556011 SUGP1Q8IWZ8 645 aaKnown RBP10.93□□□□□ -0.66
PSEN1-215ENST00000556011 PXYLP1Q8TE99 480 aa10.93□□□□□ -0.66
PSEN1-215ENST00000556011 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.93□□□□□ -0.66
PSEN1-215ENST00000556011 ZNF330Q9Y3S2 320 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-215ENST00000556011 RTL9Q8NET4 1388 aa10.92□□□□□ -0.66
PSEN1-215ENST00000556011 SPTAN1Q13813 2472 aaKnown RBP10.92□□□□□ -0.66
PSEN1-215ENST00000556011 FLT3LGP49771 235 aa10.92□□□□□ -0.66
PSEN1-215ENST00000556011 ZNF280AP59817 542 aaPredicted RBP10.92□□□□□ -0.66
PSEN1-215ENST00000556011 CCDC129Q6ZRS4 1044 aa10.92□□□□□ -0.66
PSEN1-215ENST00000556011 RIC3Q7Z5B4 369 aa10.92□□□□□ -0.66
PSEN1-215ENST00000556011 FRMD5Q7Z6J6 570 aa10.92□□□□□ -0.66
PSEN1-215ENST00000556011 TMEFF1Q8IYR6 380 aa10.92□□□□□ -0.66
PSEN1-215ENST00000556011 NFATC2IPQ8NCF5 419 aa10.92□□□□□ -0.66
PSEN1-215ENST00000556011 SLC4A5Q9BY07 1137 aa10.92□□□□□ -0.66
PSEN1-215ENST00000556011 DBNDD1Q9H9R9 158 aa10.92□□□□□ -0.66
PSEN1-215ENST00000556011 GBF1Q92538 1859 aa10.91□□□□□ -0.66
PSEN1-215ENST00000556011 NBPF26B4DH59 902 aa10.91□□□□□ -0.66
PSEN1-215ENST00000556011 PKN1Q16512 942 aa10.91□□□□□ -0.66
PSEN1-215ENST00000556011 NBPF9Q3BBW0 867 aa10.91□□□□□ -0.66
PSEN1-215ENST00000556011 DPP8Q6V1X1 898 aaPredicted RBP10.91□□□□□ -0.66
PSEN1-215ENST00000556011 TPTE2Q6XPS3 522 aa10.91□□□□□ -0.66
PSEN1-215ENST00000556011 SPATA18Q8TC71 538 aa10.91□□□□□ -0.66
PSEN1-215ENST00000556011 DOCK3Q8IZD9 2030 aa10.91□□□□□ -0.66
PSEN1-215ENST00000556011 GAKO14976 1311 aa10.9□□□□□ -0.66
PSEN1-215ENST00000556011 HOXA10P31260 410 aaPredicted RBP10.9□□□□□ -0.66
PSEN1-215ENST00000556011 VCPP55072 806 aaKnown RBP10.9□□□□□ -0.66
PSEN1-215ENST00000556011 RPGRQ92834 1020 aaKnown RBP10.9□□□□□ -0.66
PSEN1-215ENST00000556011 OPTNQ96CV9 577 aa10.9□□□□□ -0.66
PSEN1-215ENST00000556011 MYOZ2Q9NPC6 264 aa10.9□□□□□ -0.66
PSEN1-215ENST00000556011 SCN9AQ15858 1988 aa10.9□□□□□ -0.66
PSEN1-215ENST00000556011 IL9P15248 144 aa10.89□□□□□ -0.67
PSEN1-215ENST00000556011 RRS1Q15050 365 aaKnown RBP10.89□□□□□ -0.67
PSEN1-215ENST00000556011 HSP90AB2PQ58FF8 381 aa10.89□□□□□ -0.67
PSEN1-215ENST00000556011 TMX4Q9H1E5 349 aaPredicted RBP10.89□□□□□ -0.67
PSEN1-215ENST00000556011 PRDM5Q9NQX1 630 aaPredicted RBP10.89□□□□□ -0.67
PSEN1-215ENST00000556011 SRPK3Q9UPE1 567 aa10.89□□□□□ -0.67
PSEN1-215ENST00000556011 ATP6V0A2Q9Y487 856 aa10.89□□□□□ -0.67
PSEN1-215ENST00000556011 MTCH2Q9Y6C9 303 aa10.89□□□□□ -0.67
PSEN1-215ENST00000556011 UBR5O95071 2799 aaPredicted RBP10.89□□□□□ -0.67
PSEN1-215ENST00000556011 WDFY3Q8IZQ1 3526 aa10.89□□□□□ -0.67
PSEN1-215ENST00000556011 RTL1A6NKG5 1358 aa10.89□□□□□ -0.67
PSEN1-215ENST00000556011 SPTA1P02549 2419 aa10.88□□□□□ -0.67
PSEN1-215ENST00000556011 ATN1P54259 1190 aaPredicted RBP10.88□□□□□ -0.67
PSEN1-215ENST00000556011 FCGRTP55899 365 aa10.87□□□□□ -0.67
PSEN1-215ENST00000556011 RSPO4Q2I0M5 234 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-215ENST00000556011 KIAA0319Q5VV43 1072 aa10.87□□□□□ -0.67
PSEN1-215ENST00000556011 KRT40Q6A162 431 aa10.87□□□□□ -0.67
PSEN1-215ENST00000556011 FBXL6Q8N531 539 aa10.87□□□□□ -0.67
PSEN1-215ENST00000556011 ELP3Q9H9T3 547 aa10.87□□□□□ -0.67
PSEN1-215ENST00000556011 IGF2RP11717 2491 aa10.87□□□□□ -0.67
PSEN1-215ENST00000556011 OTOFQ9HC10 1997 aa10.86□□□□□ -0.67
PSEN1-215ENST00000556011 COL4A4P53420 1690 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-215ENST00000556011 C2CD3Q4AC94 2353 aa10.86□□□□□ -0.67
PSEN1-215ENST00000556011 KDM4AO75164 1064 aa10.86□□□□□ -0.67
PSEN1-215ENST00000556011 LRRC41Q15345 812 aa10.86□□□□□ -0.67
PSEN1-215ENST00000556011 HMX1Q9NP08 348 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-215ENST00000556011 CENPJQ9HC77 1338 aaPredicted RBP10.85□□□□□ -0.67
PSEN1-215ENST00000556011 TMEM221A6NGB7 291 aa10.85□□□□□ -0.67
PSEN1-215ENST00000556011 M0R296 226 aa10.85□□□□□ -0.67
PSEN1-215ENST00000556011 VIL1P09327 827 aaKnown RBP10.85□□□□□ -0.67
PSEN1-215ENST00000556011 GTF2A2P52657 109 aa10.85□□□□□ -0.67
PSEN1-215ENST00000556011 RTP1P59025 263 aa10.85□□□□□ -0.67
PSEN1-215ENST00000556011 TRIM32Q13049 653 aa10.85□□□□□ -0.67
PSEN1-215ENST00000556011 CRACR2BQ8N4Y2 399 aaPredicted RBP10.85□□□□□ -0.67
PSEN1-215ENST00000556011 CRAMP1Q96RY5 1269 aa10.85□□□□□ -0.67
PSEN1-215ENST00000556011 SENP6Q9GZR1 1112 aaPredicted RBP10.85□□□□□ -0.67
PSEN1-215ENST00000556011 NKX2-4Q9H2Z4 354 aa10.85□□□□□ -0.67
PSEN1-215ENST00000556011 FLT4P35916 1363 aa10.85□□□□□ -0.67
PSEN1-215ENST00000556011 BTBD19C9JJ37 291 aa10.84□□□□□ -0.67
PSEN1-215ENST00000556011 RFXAPO00287 272 aa10.84□□□□□ -0.67
PSEN1-215ENST00000556011 PPP1R12BO60237 982 aaPredicted RBP10.84□□□□□ -0.67
PSEN1-215ENST00000556011 IRF5Q13568 498 aa10.84□□□□□ -0.67
PSEN1-215ENST00000556011 RBM17Q96I25 401 aaKnown RBP10.84□□□□□ -0.67
PSEN1-215ENST00000556011 MUTYHQ9UIF7 546 aa10.84□□□□□ -0.67
PSEN1-215ENST00000556011 LHX6Q9UPM6 363 aa10.84□□□□□ -0.67
PSEN1-215ENST00000556011 ATP11BQ9Y2G3 1177 aa10.84□□□□□ -0.67
PSEN1-215ENST00000556011 ABCC12Q96J65 1359 aa10.83□□□□□ -0.68
PSEN1-215ENST00000556011 UNCXA6NJT0 531 aa10.83□□□□□ -0.68
PSEN1-215ENST00000556011 TAF4O00268 1085 aa10.83□□□□□ -0.68
PSEN1-215ENST00000556011 GTF2E1P29083 439 aaPredicted RBP10.83□□□□□ -0.68
PSEN1-215ENST00000556011 EVX2Q03828 476 aa10.83□□□□□ -0.68
PSEN1-215ENST00000556011 SH3RF1Q7Z6J0 888 aa10.83□□□□□ -0.68
PSEN1-215ENST00000556011 NECTIN2Q92692 538 aa10.83□□□□□ -0.68
PSEN1-215ENST00000556011 SLC28A3Q9HAS3 691 aa10.83□□□□□ -0.68
PSEN1-215ENST00000556011 DUOX1Q9NRD9 1551 aa10.82□□□□□ -0.68
PSEN1-215ENST00000556011 GTPBP6O43824 516 aaPredicted RBP10.82□□□□□ -0.68
PSEN1-215ENST00000556011 ECE2O60344 883 aa10.82□□□□□ -0.68
PSEN1-215ENST00000556011 AVPR2P30518 371 aa10.82□□□□□ -0.68
PSEN1-215ENST00000556011 DOK7Q18PE1 504 aa10.82□□□□□ -0.68
PSEN1-215ENST00000556011 LARP1BQ659C4 914 aaKnown RBP10.82□□□□□ -0.68
PSEN1-215ENST00000556011 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.82□□□□□ -0.68
PSEN1-215ENST00000556011 PIK3R5Q8WYR1 880 aa10.82□□□□□ -0.68
PSEN1-215ENST00000556011 EDAQ92838 391 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms