RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 FDX2Q6P4F2 183 aa8.6□□□□□ -1.03
ATXN3-234ENST00000555958 ARMC10Q8N2F6 343 aa8.6□□□□□ -1.03
ATXN3-234ENST00000555958 UTP4Q969X6 686 aaKnown RBP8.6□□□□□ -1.03
ATXN3-234ENST00000555958 TMPRSS13Q9BYE2 586 aa8.6□□□□□ -1.03
ATXN3-234ENST00000555958 ZFYVE1Q9HBF4 777 aa8.6□□□□□ -1.03
ATXN3-234ENST00000555958 DHX15O43143 795 aaKnown RBP8.59□□□□□ -1.03
ATXN3-234ENST00000555958 FBF1Q8TES7 1133 aa8.59□□□□□ -1.03
ATXN3-234ENST00000555958 NRSN2Q9GZP1 204 aa8.59□□□□□ -1.03
ATXN3-234ENST00000555958 CYP4F12Q9HCS2 524 aa8.59□□□□□ -1.03
ATXN3-234ENST00000555958 STOML1Q9UBI4 398 aa8.59□□□□□ -1.03
ATXN3-234ENST00000555958 AKAP2Q9Y2D5 859 aa8.59□□□□□ -1.03
ATXN3-234ENST00000555958 RAXQ9Y2V3 346 aa8.59□□□□□ -1.03
ATXN3-234ENST00000555958 P4HBP07237 508 aaKnown RBP8.58□□□□□ -1.04
ATXN3-234ENST00000555958 XRCC5P13010 732 aaKnown RBP8.58□□□□□ -1.04
ATXN3-234ENST00000555958 ATP2B2Q01814 1243 aa8.58□□□□□ -1.04
ATXN3-234ENST00000555958 FAAP100Q0VG06 881 aa8.58□□□□□ -1.04
ATXN3-234ENST00000555958 UVSSAQ2YD98 709 aa8.58□□□□□ -1.04
ATXN3-234ENST00000555958 SMG8Q8ND04 991 aaKnown RBP8.58□□□□□ -1.04
ATXN3-234ENST00000555958 PREPP48147 710 aa8.57□□□□□ -1.04
ATXN3-234ENST00000555958 MYRFLQ96LU7 910 aa8.57□□□□□ -1.04
ATXN3-234ENST00000555958 CORO1BQ9BR76 489 aa8.57□□□□□ -1.04
ATXN3-234ENST00000555958 TRIM56Q9BRZ2 755 aaKnown RBP8.57□□□□□ -1.04
ATXN3-234ENST00000555958 SUGCTQ9HAC7 445 aa8.57□□□□□ -1.04
ATXN3-234ENST00000555958 ANKRD33BA6NCL7 494 aa8.56□□□□□ -1.04
ATXN3-234ENST00000555958 CTSBP07858 339 aa8.56□□□□□ -1.04
ATXN3-234ENST00000555958 BMP3P12645 472 aa8.56□□□□□ -1.04
ATXN3-234ENST00000555958 DRD2P14416 443 aa8.56□□□□□ -1.04
ATXN3-234ENST00000555958 GZF1Q9H116 711 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-234ENST00000555958 GAS2O43903 313 aaKnown RBP8.55□□□□□ -1.04
ATXN3-234ENST00000555958 ECEL1O95672 775 aa8.55□□□□□ -1.04
ATXN3-234ENST00000555958 LDHBP07195 334 aaKnown RBP8.55□□□□□ -1.04
ATXN3-234ENST00000555958 ZMYM1Q5SVZ6 1142 aa8.55□□□□□ -1.04
ATXN3-234ENST00000555958 FAM20CQ8IXL6 584 aa8.55□□□□□ -1.04
ATXN3-234ENST00000555958 OSBPL7Q9BZF2 842 aa8.55□□□□□ -1.04
ATXN3-234ENST00000555958 KCNF1Q9H3M0 494 aa8.55□□□□□ -1.04
ATXN3-234ENST00000555958 RAD18Q9NS91 495 aa8.55□□□□□ -1.04
ATXN3-234ENST00000555958 GIPC1O14908 333 aa8.54□□□□□ -1.04
ATXN3-234ENST00000555958 TIAF1O95411 115 aa8.54□□□□□ -1.04
ATXN3-234ENST00000555958 FSTP19883 344 aa8.54□□□□□ -1.04
ATXN3-234ENST00000555958 PPP2R3AQ06190 1150 aa8.54□□□□□ -1.04
ATXN3-234ENST00000555958 SOX4Q06945 474 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-234ENST00000555958 AP3B2Q13367 1082 aa8.54□□□□□ -1.04
ATXN3-234ENST00000555958 HP1BP3Q5SSJ5 553 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-234ENST00000555958 SLC51AQ86UW1 340 aa8.54□□□□□ -1.04
ATXN3-234ENST00000555958 CLEC10AQ8IUN9 316 aa8.54□□□□□ -1.04
ATXN3-234ENST00000555958 TRIM42Q8IWZ5 723 aa8.54□□□□□ -1.04
ATXN3-234ENST00000555958 TMEM39AQ9NV64 488 aa8.54□□□□□ -1.04
ATXN3-234ENST00000555958 GPN3Q9UHW5 284 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-234ENST00000555958 SPG7Q9UQ90 795 aa8.54□□□□□ -1.04
ATXN3-234ENST00000555958 USP11P51784 963 aa8.53□□□□□ -1.04
ATXN3-234ENST00000555958 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-234ENST00000555958 FAM83CQ9BQN1 747 aa8.53□□□□□ -1.04
ATXN3-234ENST00000555958 SRCIN1Q9C0H9 1055 aa8.53□□□□□ -1.04
ATXN3-234ENST00000555958 HMX2A2RU54 273 aa8.52□□□□□ -1.05
ATXN3-234ENST00000555958 GSTT1P30711 240 aa8.52□□□□□ -1.05
ATXN3-234ENST00000555958 PDE3AQ14432 1141 aa8.52□□□□□ -1.05
ATXN3-234ENST00000555958 AKAP4Q5JQC9 854 aa8.52□□□□□ -1.05
ATXN3-234ENST00000555958 BEND4Q6ZU67 534 aa8.52□□□□□ -1.05
ATXN3-234ENST00000555958 C3orf58Q8NDZ4 430 aa8.52□□□□□ -1.05
ATXN3-234ENST00000555958 ZC3H12CQ9C0D7 883 aaKnown RBP8.52□□□□□ -1.05
ATXN3-234ENST00000555958 C7orf69Q9H7B7 122 aa8.52□□□□□ -1.05
ATXN3-234ENST00000555958 HIF3AQ9Y2N7 669 aa8.52□□□□□ -1.05
ATXN3-234ENST00000555958 MAP4P27816 1152 aaKnown RBP8.51□□□□□ -1.05
ATXN3-234ENST00000555958 RXRBP28702 533 aa8.51□□□□□ -1.05
ATXN3-234ENST00000555958 COL19A1Q14993 1142 aa8.51□□□□□ -1.05
ATXN3-234ENST00000555958 SGO2Q562F6 1265 aa8.51□□□□□ -1.05
ATXN3-234ENST00000555958 EAPPQ56P03 285 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-234ENST00000555958 C2CD4AQ8NCU7 369 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-234ENST00000555958 AOC2O75106 756 aa8.5□□□□□ -1.05
ATXN3-234ENST00000555958 IGLV1-40P01703 118 aa8.5□□□□□ -1.05
ATXN3-234ENST00000555958 DYMQ7RTS9 669 aa8.5□□□□□ -1.05
ATXN3-234ENST00000555958 FRMD6Q96NE9 622 aa8.5□□□□□ -1.05
ATXN3-234ENST00000555958 C12orf49Q9H741 205 aa8.5□□□□□ -1.05
ATXN3-234ENST00000555958 GSC2O15499 205 aa8.49□□□□□ -1.05
ATXN3-234ENST00000555958 PRPF40AO75400 957 aaKnown RBP8.49□□□□□ -1.05
ATXN3-234ENST00000555958 ADH5P11766 374 aa8.49□□□□□ -1.05
ATXN3-234ENST00000555958 LIG1P18858 919 aa8.49□□□□□ -1.05
ATXN3-234ENST00000555958 ARNTP27540 789 aa8.49□□□□□ -1.05
ATXN3-234ENST00000555958 RNF43Q68DV7 783 aa8.49□□□□□ -1.05
ATXN3-234ENST00000555958 CDPF1Q6NVV7 123 aa8.49□□□□□ -1.05
ATXN3-234ENST00000555958 TPTE2Q6XPS3 522 aa8.49□□□□□ -1.05
ATXN3-234ENST00000555958 DNAJC14Q6Y2X3 702 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-234ENST00000555958 FBLIM1Q8WUP2 373 aa8.49□□□□□ -1.05
ATXN3-234ENST00000555958 CCDC86Q9H6F5 360 aaKnown RBP8.49□□□□□ -1.05
ATXN3-234ENST00000555958 LOC100996750A0A140TA64 210 aa8.48□□□□□ -1.05
ATXN3-234ENST00000555958 GSTP1P09211 210 aaKnown RBP8.48□□□□□ -1.05
ATXN3-234ENST00000555958 FGD1P98174 961 aa8.48□□□□□ -1.05
ATXN3-234ENST00000555958 NFIAQ12857 509 aa8.48□□□□□ -1.05
ATXN3-234ENST00000555958 SULF2Q8IWU5 870 aa8.48□□□□□ -1.05
ATXN3-234ENST00000555958 STK35Q8TDR2 534 aa8.48□□□□□ -1.05
ATXN3-234ENST00000555958 KCNB2Q92953 911 aa8.48□□□□□ -1.05
ATXN3-234ENST00000555958 WDR89Q96FK6 387 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-234ENST00000555958 NECAB3Q96P71 396 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-234ENST00000555958 DUSP9Q99956 384 aaKnown RBP8.48□□□□□ -1.05
ATXN3-234ENST00000555958 KRTAP4-6Q9BYQ5 205 aa8.48□□□□□ -1.05
ATXN3-234ENST00000555958 CEP44Q9C0F1 390 aa8.48□□□□□ -1.05
ATXN3-234ENST00000555958 FAM8A1Q9UBU6 413 aa8.48□□□□□ -1.05
ATXN3-234ENST00000555958 FAM95CA0A1B0GW59 222 aa8.47□□□□□ -1.05
ATXN3-234ENST00000555958 SLFN14P0C7P3 912 aa8.47□□□□□ -1.05
ATXN3-234ENST00000555958 GNA15P30679 374 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms