RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 RBM6P78332 1123 aaKnown RBP15.69■□□□□ 0.1
SHMT2-222ENST00000555774 KIF23Q02241 960 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-222ENST00000555774 SYNE3Q6ZMZ3 975 aa15.69■□□□□ 0.1
SHMT2-222ENST00000555774 SDF4Q9BRK5 362 aa15.69■□□□□ 0.1
SHMT2-222ENST00000555774 CNNM1Q9NRU3 951 aa15.69■□□□□ 0.1
SHMT2-222ENST00000555774 ASAP1Q9ULH1 1129 aa15.69■□□□□ 0.1
SHMT2-222ENST00000555774 C4AP0C0L4 1744 aa15.69■□□□□ 0.1
SHMT2-222ENST00000555774 C4BP0C0L5 1744 aa15.69■□□□□ 0.1
SHMT2-222ENST00000555774 DHX8Q14562 1220 aaKnown RBP15.69■□□□□ 0.1
SHMT2-222ENST00000555774 SYCP1Q15431 976 aa15.69■□□□□ 0.1
SHMT2-222ENST00000555774 CCDC144BQ3MJ40 725 aa15.69■□□□□ 0.1
SHMT2-222ENST00000555774 CPLX2Q6PUV4 134 aaKnown RBP15.69■□□□□ 0.1
SHMT2-222ENST00000555774 LRRC8AQ8IWT6 810 aa15.69■□□□□ 0.1
SHMT2-222ENST00000555774 CCDC144CPQ8IYA2 1237 aa15.69■□□□□ 0.1
SHMT2-222ENST00000555774 CCDC85AQ96PX6 553 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-222ENST00000555774 GREM2Q9H772 168 aa15.69■□□□□ 0.1
SHMT2-222ENST00000555774 TBC1D2BQ9UPU7 963 aa15.69■□□□□ 0.1
SHMT2-222ENST00000555774 PAXBP1Q9Y5B6 917 aa15.69■□□□□ 0.1
SHMT2-222ENST00000555774 CLIC4Q9Y696 253 aa15.69■□□□□ 0.1
SHMT2-222ENST00000555774 SMTNL1A8MU46 457 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 SH2B2O14492 632 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-222ENST00000555774 NDUFA8P51970 172 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 ZRSR1Q15695 479 aaKnown RBP15.68■□□□□ 0.1
SHMT2-222ENST00000555774 ALX1Q15699 326 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 ANO1Q5XXA6 986 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 ZNF710Q8N1W2 664 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 TMEM87BQ96K49 555 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 AK7Q96M32 723 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 CCDC94Q9BW85 323 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-222ENST00000555774 KIAA1468Q9P260 1216 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 ERVV-1B6SEH8 477 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 IRS4O14654 1257 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-222ENST00000555774 PDE8AO60658 829 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 PDE8BO95263 885 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 CMA1P23946 247 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 GSDMDP57764 484 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 SLC9C2Q5TAH2 1124 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 PI16Q6UXB8 463 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 BCL2L12Q9HB09 334 aa15.68■□□□□ 0.1
SHMT2-222ENST00000555774 HLFQ16534 295 aa15.67■□□□□ 0.1
SHMT2-222ENST00000555774 TIGD1Q96MW7 591 aa15.67■□□□□ 0.1
SHMT2-222ENST00000555774 NBPF3Q9H094 633 aa15.67■□□□□ 0.1
SHMT2-222ENST00000555774 KCND1Q9NSA2 647 aa15.67■□□□□ 0.1
SHMT2-222ENST00000555774 IMPACTQ9P2X3 320 aa15.67■□□□□ 0.1
SHMT2-222ENST00000555774 AKAP11Q9UKA4 1901 aa15.67■□□□□ 0.1
SHMT2-222ENST00000555774 A0A1B0GVL5 298 aa15.67■□□□□ 0.1
SHMT2-222ENST00000555774 CYP19A1P11511 503 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-222ENST00000555774 METAP2P50579 478 aaKnown RBP eCLIP15.67■□□□□ 0.11e-6■■■□□ 16.1
SHMT2-222ENST00000555774 OTUD7BQ6GQQ9 843 aa15.67■□□□□ 0.1
SHMT2-222ENST00000555774 AOPEPQ8N6M6 819 aa15.67■□□□□ 0.1
SHMT2-222ENST00000555774 MROH5Q6ZUA9 1318 aa15.67■□□□□ 0.1
SHMT2-222ENST00000555774 DISP2A7MBM2 1401 aa15.67■□□□□ 0.1
SHMT2-222ENST00000555774 BCL9O00512 1426 aa15.67■□□□□ 0.1
SHMT2-222ENST00000555774 NHSL1Q5SYE7 1610 aa15.67■□□□□ 0.1
SHMT2-222ENST00000555774 ARAP2Q8WZ64 1704 aa15.67■□□□□ 0.1
SHMT2-222ENST00000555774 PPFIA3O75145 1194 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 POLR3DP05423 398 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-222ENST00000555774 TPM4P67936 248 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 SLC39A14Q15043 492 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 PUM3Q15397 648 aaKnown RBP15.66■□□□□ 0.1
SHMT2-222ENST00000555774 TBC1D10CQ8IV04 446 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 JMYQ8N9B5 988 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 LPIN2Q92539 896 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 PIH1D3Q9NQM4 214 aaKnown RBP15.66■□□□□ 0.1
SHMT2-222ENST00000555774 NEDD4P46934 1319 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 ZNF532Q9HCE3 1301 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 KIF28PB7ZC32 967 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 PPP6R2O75170 966 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 TNNT1P13805 278 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 PDE6AP16499 860 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 NLRP12P59046 1061 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 CCDC102BQ68D86 513 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 ANKRD7Q92527 254 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 ALG1Q9BT22 464 aa15.66■□□□□ 0.1
SHMT2-222ENST00000555774 OSBPL5Q9H0X9 879 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-222ENST00000555774 TRMT112Q9UI30 125 aaKnown RBP15.66■□□□□ 0.1
SHMT2-222ENST00000555774 MYH3P11055 1940 aa15.65■□□□□ 0.1
SHMT2-222ENST00000555774 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.65■□□□□ 0.1
SHMT2-222ENST00000555774 STK36Q9NRP7 1315 aa15.65■□□□□ 0.1
SHMT2-222ENST00000555774 TCRBV5S4A2TA0A5A2 114 aa15.65■□□□□ 0.1
SHMT2-222ENST00000555774 SLC3A2P08195 630 aaKnown RBP15.65■□□□□ 0.1
SHMT2-222ENST00000555774 GPTP24298 496 aa15.65■□□□□ 0.1
SHMT2-222ENST00000555774 TPD52L1Q16890 204 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-222ENST00000555774 AXDND1Q5T1B0 1012 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-222ENST00000555774 SGMS1Q86VZ5 419 aa15.65■□□□□ 0.1
SHMT2-222ENST00000555774 FAM237AA0A1B0GTK4 181 aa15.65■□□□□ 0.1
SHMT2-222ENST00000555774 ZNF202O95125 648 aa15.65■□□□□ 0.1
SHMT2-222ENST00000555774 FGFR2P21802 821 aa15.65■□□□□ 0.1
SHMT2-222ENST00000555774 CYB5R4Q7L1T6 521 aa15.65■□□□□ 0.1
SHMT2-222ENST00000555774 ITGB4P16144 1822 aa15.64■□□□□ 0.09
SHMT2-222ENST00000555774 NID2Q14112 1375 aa15.64■□□□□ 0.09
SHMT2-222ENST00000555774 IDH1O75874 414 aaKnown RBP15.64■□□□□ 0.09
SHMT2-222ENST00000555774 IL6STP40189 918 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-222ENST00000555774 APOA5Q6Q788 366 aa15.64■□□□□ 0.09
SHMT2-222ENST00000555774 SYNE4Q8N205 404 aa15.64■□□□□ 0.09
SHMT2-222ENST00000555774 C16orf45Q96MC5 204 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-222ENST00000555774 STRBPQ96SI9 672 aaKnown RBP15.64■□□□□ 0.09
SHMT2-222ENST00000555774 CCDC69A6NI79 296 aa15.63■□□□□ 0.09
SHMT2-222ENST00000555774 PFKFB1P16118 471 aa15.63■□□□□ 0.09
SHMT2-222ENST00000555774 LIFRP42702 1097 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms