RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 CCDC88AQ3V6T2 1871 aa9.49□□□□□ -0.89
PCNX4-210ENST00000555740 IFIT1P09914 478 aaKnown RBP9.48□□□□□ -0.89
PCNX4-210ENST00000555740 UQCRFS1P1P0C7P4 283 aa9.48□□□□□ -0.89
PCNX4-210ENST00000555740 ADORA1P30542 326 aa9.48□□□□□ -0.89
PCNX4-210ENST00000555740 SH3D19Q5HYK7 790 aa9.48□□□□□ -0.89
PCNX4-210ENST00000555740 CC2D2BQ6DHV5 1058 aa9.48□□□□□ -0.89
PCNX4-210ENST00000555740 C7orf43Q8WVR3 580 aa9.48□□□□□ -0.89
PCNX4-210ENST00000555740 SDSP20132 328 aa9.48□□□□□ -0.89
PCNX4-210ENST00000555740 ATP2B4P23634 1241 aa9.48□□□□□ -0.89
PCNX4-210ENST00000555740 METTL3Q86U44 580 aaKnown RBP9.48□□□□□ -0.89
PCNX4-210ENST00000555740 SNRKQ9NRH2 765 aa9.48□□□□□ -0.89
PCNX4-210ENST00000555740 IGSF3O75054 1194 aa9.47□□□□□ -0.89
PCNX4-210ENST00000555740 CDC45O75419 566 aa9.47□□□□□ -0.89
PCNX4-210ENST00000555740 KCNA3P22001 575 aa9.47□□□□□ -0.89
PCNX4-210ENST00000555740 GPSM2P81274 684 aa9.47□□□□□ -0.89
PCNX4-210ENST00000555740 TSHZ3Q63HK5 1081 aa9.47□□□□□ -0.89
PCNX4-210ENST00000555740 PRPF40BQ6NWY9 871 aaKnown RBP9.47□□□□□ -0.89
PCNX4-210ENST00000555740 PTCD2Q8WV60 388 aaKnown RBP9.47□□□□□ -0.89
PCNX4-210ENST00000555740 RTFDC1Q9BY42 306 aaPredicted RBP9.47□□□□□ -0.89
PCNX4-210ENST00000555740 PSDA5PKW4 1024 aaPredicted RBP9.47□□□□□ -0.89
PCNX4-210ENST00000555740 TIMM10P62072 90 aa9.47□□□□□ -0.89
PCNX4-210ENST00000555740 FBXO33Q7Z6M2 555 aa9.47□□□□□ -0.89
PCNX4-210ENST00000555740 EVI5LQ96CN4 794 aa9.47□□□□□ -0.89
PCNX4-210ENST00000555740 BACH2Q9BYV9 841 aa9.47□□□□□ -0.89
PCNX4-210ENST00000555740 LAMA4Q16363 1823 aa9.46□□□□□ -0.89
PCNX4-210ENST00000555740 EIF5BO60841 1220 aaKnown RBP9.46□□□□□ -0.89
PCNX4-210ENST00000555740 TAF5LO75529 589 aa9.46□□□□□ -0.89
PCNX4-210ENST00000555740 CCDC158Q5M9N0 1113 aa9.46□□□□□ -0.89
PCNX4-210ENST00000555740 CCDC102BQ68D86 513 aa9.46□□□□□ -0.89
PCNX4-210ENST00000555740 CNTROBQ8N137 903 aa9.46□□□□□ -0.89
PCNX4-210ENST00000555740 DICER1Q9UPY3 1922 aaKnown RBP9.46□□□□□ -0.89
PCNX4-210ENST00000555740 CHD4Q14839 1912 aa9.46□□□□□ -0.9
PCNX4-210ENST00000555740 CHRNA5P30532 468 aa9.46□□□□□ -0.9
PCNX4-210ENST00000555740 TTC39AQ5SRH9 613 aa9.46□□□□□ -0.9
PCNX4-210ENST00000555740 MYSM1Q5VVJ2 828 aa9.46□□□□□ -0.9
PCNX4-210ENST00000555740 HELBQ8NG08 1087 aaPredicted RBP9.46□□□□□ -0.9
PCNX4-210ENST00000555740 NEUROD6Q96NK8 337 aa9.46□□□□□ -0.9
PCNX4-210ENST00000555740 FAM217BQ9NTX9 383 aaPredicted RBP9.46□□□□□ -0.9
PCNX4-210ENST00000555740 A6NJR5 290 aa9.45□□□□□ -0.9
PCNX4-210ENST00000555740 SEC24BO95487 1268 aa9.45□□□□□ -0.9
PCNX4-210ENST00000555740 DPEP1P16444 411 aa9.45□□□□□ -0.9
PCNX4-210ENST00000555740 CLCN1P35523 988 aa9.45□□□□□ -0.9
PCNX4-210ENST00000555740 PHKA1P46020 1223 aa9.45□□□□□ -0.9
PCNX4-210ENST00000555740 PADI6Q6TGC4 694 aa9.45□□□□□ -0.9
PCNX4-210ENST00000555740 SPON1Q9HCB6 807 aa9.45□□□□□ -0.9
PCNX4-210ENST00000555740 GGA1Q9UJY5 639 aa9.45□□□□□ -0.9
PCNX4-210ENST00000555740 RAD50Q92878 1312 aa9.45□□□□□ -0.9
PCNX4-210ENST00000555740 MCAMP43121 646 aa9.45□□□□□ -0.9
PCNX4-210ENST00000555740 IER5LQ5T953 404 aa9.45□□□□□ -0.9
PCNX4-210ENST00000555740 SOGA3Q5TF21 947 aa9.45□□□□□ -0.9
PCNX4-210ENST00000555740 TMED8Q6PL24 325 aaPredicted RBP9.45□□□□□ -0.9
PCNX4-210ENST00000555740 TBC1D16Q8TBP0 767 aa9.45□□□□□ -0.9
PCNX4-210ENST00000555740 SALL1Q9NSC2 1324 aa9.45□□□□□ -0.9
PCNX4-210ENST00000555740 FOCADQ5VW36 1801 aa9.44□□□□□ -0.9
PCNX4-210ENST00000555740 HIP1O00291 1037 aa9.44□□□□□ -0.9
PCNX4-210ENST00000555740 KCNJ4P48050 445 aa9.44□□□□□ -0.9
PCNX4-210ENST00000555740 TBC1D9Q6ZT07 1266 aa9.44□□□□□ -0.9
PCNX4-210ENST00000555740 SLC51AQ86UW1 340 aa9.44□□□□□ -0.9
PCNX4-210ENST00000555740 TTLL6Q8N841 843 aa9.44□□□□□ -0.9
PCNX4-210ENST00000555740 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.44□□□□□ -0.9
PCNX4-210ENST00000555740 PAG1Q9NWQ8 432 aa9.44□□□□□ -0.9
PCNX4-210ENST00000555740 DDX60LQ5H9U9 1706 aaKnown RBP9.44□□□□□ -0.9
PCNX4-210ENST00000555740 EPB41L2O43491 1005 aaKnown RBP9.44□□□□□ -0.9
PCNX4-210ENST00000555740 UFL1O94874 794 aa9.44□□□□□ -0.9
PCNX4-210ENST00000555740 IL1R1P14778 569 aa9.44□□□□□ -0.9
PCNX4-210ENST00000555740 KLRK1P26718 216 aa9.44□□□□□ -0.9
PCNX4-210ENST00000555740 SCARF1Q14162 830 aa9.44□□□□□ -0.9
PCNX4-210ENST00000555740 KBTBD3Q8NAB2 608 aa9.44□□□□□ -0.9
PCNX4-210ENST00000555740 ZNF622Q969S3 477 aaKnown RBP eCLIP9.44□□□□□ -0.9
PCNX4-210ENST00000555740 FAM84BQ96KN1 310 aaPredicted RBP9.44□□□□□ -0.9
PCNX4-210ENST00000555740 GNL3LQ9NVN8 582 aaKnown RBP9.44□□□□□ -0.9
PCNX4-210ENST00000555740 SCN9AQ15858 1988 aa9.44□□□□□ -0.9
PCNX4-210ENST00000555740 LTBP3Q9NS15 1303 aa9.44□□□□□ -0.9
PCNX4-210ENST00000555740 CHMLP26374 656 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 RASGRF1Q13972 1273 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 TTF1Q15361 905 aaPredicted RBP9.43□□□□□ -0.9
PCNX4-210ENST00000555740 SKIV2LQ15477 1246 aaKnown RBP9.43□□□□□ -0.9
PCNX4-210ENST00000555740 CCDC93Q567U6 631 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 CAVIN4Q5BKX8 364 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 GORABQ5T7V8 394 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 PSMD1Q99460 953 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 VPS33BQ9H267 617 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 BOLA2Q9H3K6 86 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 HMG20BQ9P0W2 317 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 ANKIB1Q9P2G1 1089 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 POLLQ9UGP5 575 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 TIAM2Q8IVF5 1701 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 LAMB1P07942 1786 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 ZNF804AQ7Z570 1209 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 MPNDQ8N594 471 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 SUPT20HQ8NEM7 779 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 TDRD7Q8NHU6 1098 aaKnown RBP9.43□□□□□ -0.9
PCNX4-210ENST00000555740 KHSRPQ92945 711 aaKnown RBP eCLIP9.43□□□□□ -0.94e-6■■■■□ 21.9
PCNX4-210ENST00000555740 DENND2AQ9ULE3 1009 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 CDK5RAP2Q96SN8 1893 aa9.43□□□□□ -0.9
PCNX4-210ENST00000555740 COL4A5P29400 1685 aa9.42□□□□□ -0.9
PCNX4-210ENST00000555740 SNAP23O00161 211 aa9.42□□□□□ -0.9
PCNX4-210ENST00000555740 PDIA4P13667 645 aaKnown RBP9.42□□□□□ -0.9
PCNX4-210ENST00000555740 HIBADHP31937 336 aaKnown RBP9.42□□□□□ -0.9
PCNX4-210ENST00000555740 CASC1Q6TDU7 716 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms