RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 AKNAD1Q5T1N1 836 aa15.37■□□□□ 0.05
ABCD4-222ENST00000555617 DCAF8Q5TAQ9 597 aa15.37■□□□□ 0.05
ABCD4-222ENST00000555617 GIGYF2Q6Y7W6 1299 aaKnown RBP15.37■□□□□ 0.05
ABCD4-222ENST00000555617 PXYLP1Q8TE99 480 aa15.37■□□□□ 0.05
ABCD4-222ENST00000555617 ZCCHC17Q9NP64 241 aaKnown RBP15.36■□□□□ 0.05
ABCD4-222ENST00000555617 CD320Q9NPF0 282 aa15.36■□□□□ 0.05
ABCD4-222ENST00000555617 OGDHLQ9ULD0 1010 aa15.36■□□□□ 0.05
ABCD4-222ENST00000555617 BCRP11274 1271 aa15.35■□□□□ 0.05
ABCD4-222ENST00000555617 FCGRTP55899 365 aa15.35■□□□□ 0.05
ABCD4-222ENST00000555617 PARP10Q53GL7 1025 aa15.35■□□□□ 0.05
ABCD4-222ENST00000555617 PRDM12Q9H4Q4 367 aa15.35■□□□□ 0.05
ABCD4-222ENST00000555617 CXXC1Q9P0U4 656 aaPredicted RBP15.35■□□□□ 0.05
ABCD4-222ENST00000555617 ZNF804BA4D1E1 1349 aa15.35■□□□□ 0.05
ABCD4-222ENST00000555617 CHD6Q8TD26 2715 aa15.34■□□□□ 0.05
ABCD4-222ENST00000555617 FRMPD3Q5JV73 1810 aa15.34■□□□□ 0.05
ABCD4-222ENST00000555617 PLXNA1Q9UIW2 1896 aa15.34■□□□□ 0.05
ABCD4-222ENST00000555617 CLRN2A0PK11 232 aa15.34■□□□□ 0.05
ABCD4-222ENST00000555617 PRR33A8MZF0 331 aa15.34■□□□□ 0.05
ABCD4-222ENST00000555617 KIF6Q6ZMV9 814 aa15.34■□□□□ 0.05
ABCD4-222ENST00000555617 OGFOD1Q8N543 542 aa15.34■□□□□ 0.05
ABCD4-222ENST00000555617 ZNF576Q9H609 170 aa15.34■□□□□ 0.05
ABCD4-222ENST00000555617 PODXL2Q9NZ53 605 aa15.34■□□□□ 0.05
ABCD4-222ENST00000555617 ZFHX2Q9C0A1 2572 aaPredicted RBP15.34■□□□□ 0.05
ABCD4-222ENST00000555617 PI4K2BG5E9Z4 385 aa15.33■□□□□ 0.04
ABCD4-222ENST00000555617 DNAJB2P25686 324 aa15.33■□□□□ 0.04
ABCD4-222ENST00000555617 KIAA0825Q8IV33 1275 aa15.33■□□□□ 0.04
ABCD4-222ENST00000555617 TAOK2Q9UL54 1235 aa15.33■□□□□ 0.04
ABCD4-222ENST00000555617 IRF6O14896 467 aa15.32■□□□□ 0.04
ABCD4-222ENST00000555617 WDHD1O75717 1129 aaPredicted RBP15.32■□□□□ 0.04
ABCD4-222ENST00000555617 U2AF1L5P0DN76 240 aaPredicted RBP15.32■□□□□ 0.04
ABCD4-222ENST00000555617 CETPP11597 493 aa15.32■□□□□ 0.04
ABCD4-222ENST00000555617 U2AF1Q01081 240 aaKnown RBP eCLIP15.32■□□□□ 0.04
ABCD4-222ENST00000555617 IRF5Q13568 498 aa15.32■□□□□ 0.04
ABCD4-222ENST00000555617 SUPT20HL1Q3ZLR7 823 aa15.32■□□□□ 0.04
ABCD4-222ENST00000555617 RRP7AQ9Y3A4 280 aaKnown RBP15.32■□□□□ 0.04
ABCD4-222ENST00000555617 TPRP12270 2363 aaKnown RBP15.32■□□□□ 0.04
ABCD4-222ENST00000555617 ARAP2Q8WZ64 1704 aa15.31■□□□□ 0.04
ABCD4-222ENST00000555617 SPDYE5A6NIY4 337 aa15.31■□□□□ 0.04
ABCD4-222ENST00000555617 GNAT3A8MTJ3 354 aa15.31■□□□□ 0.04
ABCD4-222ENST00000555617 MYL6BP14649 208 aa15.31■□□□□ 0.04
ABCD4-222ENST00000555617 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.31■□□□□ 0.042e-6■■■□□ 15.6
ABCD4-222ENST00000555617 PPP2R3BQ9Y5P8 575 aa15.31■□□□□ 0.04
ABCD4-222ENST00000555617 PTPRZ1P23471 2315 aaPredicted RBP15.3■□□□□ 0.04
ABCD4-222ENST00000555617 NEUROD1Q13562 356 aa15.3■□□□□ 0.04
ABCD4-222ENST00000555617 FBXW7Q969H0 707 aa15.3■□□□□ 0.04
ABCD4-222ENST00000555617 UIMC1Q96RL1 719 aa15.3■□□□□ 0.04
ABCD4-222ENST00000555617 SNCAIPQ9Y6H5 919 aa15.3■□□□□ 0.04
ABCD4-222ENST00000555617 PLXNB2O15031 1838 aa15.29■□□□□ 0.04
ABCD4-222ENST00000555617 PDHXO00330 501 aa15.29■□□□□ 0.04
ABCD4-222ENST00000555617 MOGSQ13724 837 aa15.29■□□□□ 0.04
ABCD4-222ENST00000555617 RASA3Q14644 834 aa15.29■□□□□ 0.04
ABCD4-222ENST00000555617 KCTD2Q14681 263 aa15.29■□□□□ 0.04
ABCD4-222ENST00000555617 MTMR14Q8NCE2 650 aa15.29■□□□□ 0.04
ABCD4-222ENST00000555617 GAS2L1Q99501 681 aaPredicted RBP15.29■□□□□ 0.04
ABCD4-222ENST00000555617 GGA1Q9UJY5 639 aa15.29■□□□□ 0.04
ABCD4-222ENST00000555617 EPHB4P54760 987 aa15.28■□□□□ 0.04
ABCD4-222ENST00000555617 NLRP10Q86W26 655 aa15.28■□□□□ 0.04
ABCD4-222ENST00000555617 BADQ92934 168 aa15.28■□□□□ 0.04
ABCD4-222ENST00000555617 RGS20O76081 388 aa15.27■□□□□ 0.04
ABCD4-222ENST00000555617 CYP2C8P10632 490 aa15.27■□□□□ 0.04
ABCD4-222ENST00000555617 TEPSINQ96N21 525 aa15.27■□□□□ 0.04
ABCD4-222ENST00000555617 TLL1O43897 1013 aa15.26■□□□□ 0.03
ABCD4-222ENST00000555617 MAP3K9P80192 1104 aa15.26■□□□□ 0.03
ABCD4-222ENST00000555617 SNAPC2Q13487 334 aa15.26■□□□□ 0.03
ABCD4-222ENST00000555617 VEZTQ9HBM0 779 aa15.26■□□□□ 0.03
ABCD4-222ENST00000555617 ANKIB1Q9P2G1 1089 aa15.26■□□□□ 0.03
ABCD4-222ENST00000555617 NCOR2Q9Y618 2525 aa15.25■□□□□ 0.03
ABCD4-222ENST00000555617 SH3TC1Q8TE82 1336 aa15.25■□□□□ 0.03
ABCD4-222ENST00000555617 PBX2P40425 430 aa15.25■□□□□ 0.03
ABCD4-222ENST00000555617 COL9A2Q14055 689 aaPredicted RBP15.25■□□□□ 0.03
ABCD4-222ENST00000555617 LRP10Q7Z4F1 713 aa15.25■□□□□ 0.03
ABCD4-222ENST00000555617 ANKRD23Q86SG2 305 aa15.25■□□□□ 0.03
ABCD4-222ENST00000555617 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.25■□□□□ 0.03
ABCD4-222ENST00000555617 TIFAQ96CG3 184 aa15.25■□□□□ 0.03
ABCD4-222ENST00000555617 HMX1Q9NP08 348 aaPredicted RBP15.25■□□□□ 0.03
ABCD4-222ENST00000555617 PRRC2BQ5JSZ5 2229 aaKnown RBP15.25■□□□□ 0.03
ABCD4-222ENST00000555617 RLFQ13129 1914 aa15.25■□□□□ 0.03
ABCD4-222ENST00000555617 MYO15AQ9UKN7 3530 aa15.25■□□□□ 0.03
ABCD4-222ENST00000555617 MYO3BQ8WXR4 1341 aa15.24■□□□□ 0.03
ABCD4-222ENST00000555617 IGFBP4P22692 258 aa15.24■□□□□ 0.03
ABCD4-222ENST00000555617 RPS8P62241 208 aaKnown RBP15.24■□□□□ 0.03
ABCD4-222ENST00000555617 SF3B3Q15393 1217 aaKnown RBP15.24■□□□□ 0.03
ABCD4-222ENST00000555617 STRIP1Q5VSL9 837 aa15.24■□□□□ 0.03
ABCD4-222ENST00000555617 PRMT6Q96LA8 375 aaPredicted RBP15.24■□□□□ 0.03
ABCD4-222ENST00000555617 RNPC3Q96LT9 517 aaKnown RBP15.24■□□□□ 0.03
ABCD4-222ENST00000555617 THUMPD2Q9BTF0 503 aaKnown RBP15.24■□□□□ 0.03
ABCD4-222ENST00000555617 SEC31BQ9NQW1 1179 aa15.24■□□□□ 0.03
ABCD4-222ENST00000555617 TRMT112Q9UI30 125 aaKnown RBP15.24■□□□□ 0.03
ABCD4-222ENST00000555617 BRWD1Q9NSI6 2320 aa15.23■□□□□ 0.03
ABCD4-222ENST00000555617 GBF1Q92538 1859 aa15.23■□□□□ 0.03
ABCD4-222ENST00000555617 TNPO2O14787 897 aaKnown RBP15.23■□□□□ 0.03
ABCD4-222ENST00000555617 HMGCRP04035 888 aa15.23■□□□□ 0.03
ABCD4-222ENST00000555617 ATN1P54259 1190 aaPredicted RBP15.23■□□□□ 0.03
ABCD4-222ENST00000555617 DLGAP5Q15398 846 aa15.23■□□□□ 0.03
ABCD4-222ENST00000555617 SETXQ7Z333 2677 aaKnown RBP15.23■□□□□ 0.03
ABCD4-222ENST00000555617 ITGB8P26012 769 aa15.22■□□□□ 0.03
ABCD4-222ENST00000555617 RIC3Q7Z5B4 369 aa15.22■□□□□ 0.03
ABCD4-222ENST00000555617 TXNRD3Q86VQ6 643 aa15.22■□□□□ 0.03
ABCD4-222ENST00000555617 ERO1BQ86YB8 467 aa15.22■□□□□ 0.03
ABCD4-222ENST00000555617 CERS5Q8N5B7 392 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms