RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 MRIQ9BWK5 157 aa13□□□□□ -0.33
TMEM260-206ENST00000555046 DCTPP1Q9H773 170 aa13□□□□□ -0.33
TMEM260-206ENST00000555046 FPGT-TNNI3KV9GXZ4 949 aa13□□□□□ -0.33
TMEM260-206ENST00000555046 PITPNM2Q9BZ72 1349 aa12.99□□□□□ -0.33
TMEM260-206ENST00000555046 SPTY2D1Q68D10 685 aaPredicted RBP12.99□□□□□ -0.33
TMEM260-206ENST00000555046 LRRCC1Q9C099 1032 aa12.99□□□□□ -0.33
TMEM260-206ENST00000555046 TAF1P21675 1872 aa12.99□□□□□ -0.33
TMEM260-206ENST00000555046 CACNA1SQ13698 1873 aa12.99□□□□□ -0.33
TMEM260-206ENST00000555046 DUOX1Q9NRD9 1551 aa12.98□□□□□ -0.33
TMEM260-206ENST00000555046 MYO1BO43795 1136 aa12.98□□□□□ -0.33
TMEM260-206ENST00000555046 IFIT2P09913 472 aaKnown RBP12.98□□□□□ -0.33
TMEM260-206ENST00000555046 CHAF1AQ13111 956 aaPredicted RBP12.98□□□□□ -0.33
TMEM260-206ENST00000555046 HDAC1Q13547 482 aaPredicted RBP12.98□□□□□ -0.33
TMEM260-206ENST00000555046 RBM26Q5T8P6 1007 aaKnown RBP12.98□□□□□ -0.33
TMEM260-206ENST00000555046 MAP1SQ66K74 1059 aaPredicted RBP12.98□□□□□ -0.33
TMEM260-206ENST00000555046 ZNF512BQ96KM6 892 aaPredicted RBP12.98□□□□□ -0.33
TMEM260-206ENST00000555046 MYOZ2Q9NPC6 264 aa12.98□□□□□ -0.33
TMEM260-206ENST00000555046 PCDHB15Q9Y5E8 787 aa12.98□□□□□ -0.33
TMEM260-206ENST00000555046 COL4A1P02462 1669 aa12.98□□□□□ -0.33
TMEM260-206ENST00000555046 MAST3O60307 1309 aa12.97□□□□□ -0.33
TMEM260-206ENST00000555046 PDS5AQ29RF7 1337 aaKnown RBP12.97□□□□□ -0.33
TMEM260-206ENST00000555046 MAP2K2P36507 400 aa12.97□□□□□ -0.33
TMEM260-206ENST00000555046 HDLBPQ00341 1268 aaKnown RBP12.97□□□□□ -0.33
TMEM260-206ENST00000555046 DLGAP5Q15398 846 aa12.97□□□□□ -0.33
TMEM260-206ENST00000555046 KIF4BQ2VIQ3 1234 aa12.97□□□□□ -0.33
TMEM260-206ENST00000555046 TTC39AQ5SRH9 613 aa12.97□□□□□ -0.33
TMEM260-206ENST00000555046 AACSQ86V21 672 aa12.97□□□□□ -0.33
TMEM260-206ENST00000555046 KIAA0825Q8IV33 1275 aa12.97□□□□□ -0.33
TMEM260-206ENST00000555046 SLF2Q8IX21 1173 aa12.97□□□□□ -0.33
TMEM260-206ENST00000555046 CNTROBQ8N137 903 aa12.97□□□□□ -0.33
TMEM260-206ENST00000555046 DCPSQ96C86 337 aaKnown RBP12.97□□□□□ -0.33
TMEM260-206ENST00000555046 PGAP2Q9UHJ9 254 aa12.97□□□□□ -0.33
TMEM260-206ENST00000555046 SERPINA10Q9UK55 444 aa12.97□□□□□ -0.33
TMEM260-206ENST00000555046 IQSEC3Q9UPP2 1182 aaPredicted RBP12.97□□□□□ -0.33
TMEM260-206ENST00000555046 ZNF609O15014 1411 aa12.96□□□□□ -0.33
TMEM260-206ENST00000555046 RANBP2P49792 3224 aaKnown RBP12.96□□□□□ -0.33
TMEM260-206ENST00000555046 APBB1O00213 710 aa12.96□□□□□ -0.33
TMEM260-206ENST00000555046 ADORA1P30542 326 aa12.96□□□□□ -0.33
TMEM260-206ENST00000555046 PHKA1P46020 1223 aa12.96□□□□□ -0.33
TMEM260-206ENST00000555046 CDC37L1Q7L3B6 337 aa12.96□□□□□ -0.33
TMEM260-206ENST00000555046 SAMD7Q7Z3H4 446 aa12.96□□□□□ -0.33
TMEM260-206ENST00000555046 SLC17A8Q8NDX2 589 aa12.96□□□□□ -0.33
TMEM260-206ENST00000555046 EAF2Q96CJ1 260 aaPredicted RBP12.96□□□□□ -0.33
TMEM260-206ENST00000555046 TTF2Q9UNY4 1162 aaKnown RBP12.96□□□□□ -0.33
TMEM260-206ENST00000555046 COL4A5P29400 1685 aa12.96□□□□□ -0.34
TMEM260-206ENST00000555046 SALL1Q9NSC2 1324 aa12.95□□□□□ -0.34
TMEM260-206ENST00000555046 LDHBP07195 334 aaKnown RBP12.95□□□□□ -0.34
TMEM260-206ENST00000555046 ARID4AP29374 1257 aaPredicted RBP12.95□□□□□ -0.34
TMEM260-206ENST00000555046 RBM5P52756 815 aaKnown RBP eCLIP12.95□□□□□ -0.34
TMEM260-206ENST00000555046 FMR1Q06787 632 aaKnown RBP eCLIP12.95□□□□□ -0.34
TMEM260-206ENST00000555046 SCARF1Q14162 830 aa12.95□□□□□ -0.34
TMEM260-206ENST00000555046 TBC1D10BQ4KMP7 808 aaPredicted RBP12.95□□□□□ -0.34
TMEM260-206ENST00000555046 TMED8Q6PL24 325 aaPredicted RBP12.95□□□□□ -0.34
TMEM260-206ENST00000555046 SPATA5Q8NB90 893 aa12.95□□□□□ -0.34
TMEM260-206ENST00000555046 MTMR14Q8NCE2 650 aa12.95□□□□□ -0.34
TMEM260-206ENST00000555046 EXOC6Q8TAG9 804 aa12.95□□□□□ -0.34
TMEM260-206ENST00000555046 GPATCH3Q96I76 525 aa12.95□□□□□ -0.34
TMEM260-206ENST00000555046 MXD3Q9BW11 206 aa12.95□□□□□ -0.34
TMEM260-206ENST00000555046 CCDC8Q9H0W5 538 aaPredicted RBP12.95□□□□□ -0.34
TMEM260-206ENST00000555046 IL1RAPL2Q9NP60 686 aa12.95□□□□□ -0.34
TMEM260-206ENST00000555046 RASGRF1Q13972 1273 aa12.94□□□□□ -0.34
TMEM260-206ENST00000555046 SULF1Q8IWU6 871 aa12.94□□□□□ -0.34
TMEM260-206ENST00000555046 CERS5Q8N5B7 392 aa12.94□□□□□ -0.34
TMEM260-206ENST00000555046 TEKT1Q969V4 418 aa12.94□□□□□ -0.34
TMEM260-206ENST00000555046 DBNDD2Q9BQY9 259 aa12.94□□□□□ -0.34
TMEM260-206ENST00000555046 JAG2Q9Y219 1238 aa12.94□□□□□ -0.34
TMEM260-206ENST00000555046 HTTP42858 3142 aa12.94□□□□□ -0.34
TMEM260-206ENST00000555046 UNC80Q8N2C7 3258 aa12.93□□□□□ -0.34
TMEM260-206ENST00000555046 F8W031 263 aaPredicted RBP12.93□□□□□ -0.34
TMEM260-206ENST00000555046 LDHCP07864 332 aa12.93□□□□□ -0.34
TMEM260-206ENST00000555046 HIRAP54198 1017 aaPredicted RBP12.93□□□□□ -0.34
TMEM260-206ENST00000555046 GSTO1P78417 241 aa12.93□□□□□ -0.34
TMEM260-206ENST00000555046 HHIPL2Q6UWX4 724 aa12.93□□□□□ -0.34
TMEM260-206ENST00000555046 ERICH6Q7L0X2 663 aa12.93□□□□□ -0.34
TMEM260-206ENST00000555046 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.93□□□□□ -0.34
TMEM260-206ENST00000555046 DBNLQ9UJU6 430 aaKnown RBP12.93□□□□□ -0.34
TMEM260-206ENST00000555046 U3KPZ7 1027 aaPredicted RBP12.93□□□□□ -0.34
TMEM260-206ENST00000555046 BRCA2P51587 3418 aa12.93□□□□□ -0.34
TMEM260-206ENST00000555046 WNT10BO00744 389 aa12.92□□□□□ -0.34
TMEM260-206ENST00000555046 NEFLP07196 543 aa12.92□□□□□ -0.34
TMEM260-206ENST00000555046 TTF1Q15361 905 aaPredicted RBP12.92□□□□□ -0.34
TMEM260-206ENST00000555046 CFAP100Q494V2 611 aa12.92□□□□□ -0.34
TMEM260-206ENST00000555046 TRPM4Q8TD43 1214 aa12.92□□□□□ -0.34
TMEM260-206ENST00000555046 HMG20BQ9P0W2 317 aa12.92□□□□□ -0.34
TMEM260-206ENST00000555046 LRP2BPQ9P2M1 347 aa12.92□□□□□ -0.34
TMEM260-206ENST00000555046 ABCF2Q9UG63 623 aa12.92□□□□□ -0.34
TMEM260-206ENST00000555046 TLL2Q9Y6L7 1015 aa12.92□□□□□ -0.34
TMEM260-206ENST00000555046 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.92□□□□□ -0.34
TMEM260-206ENST00000555046 SHTN1A0MZ66 631 aa12.91□□□□□ -0.34
TMEM260-206ENST00000555046 CRKP46108 304 aa12.91□□□□□ -0.34
TMEM260-206ENST00000555046 TNFAIP1Q13829 316 aa12.91□□□□□ -0.34
TMEM260-206ENST00000555046 ANKRD45Q5TZF3 282 aa12.91□□□□□ -0.34
TMEM260-206ENST00000555046 KRT26Q7Z3Y9 468 aa12.91□□□□□ -0.34
TMEM260-206ENST00000555046 DZIP1Q86YF9 867 aaKnown RBP12.91□□□□□ -0.34
TMEM260-206ENST00000555046 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
TMEM260-206ENST00000555046 ZDHHC15Q96MV8 337 aa12.91□□□□□ -0.34
TMEM260-206ENST00000555046 BCL11AQ9H165 835 aa12.91□□□□□ -0.34
TMEM260-206ENST00000555046 TMOD2Q9NZR1 351 aa12.91□□□□□ -0.34
TMEM260-206ENST00000555046 CENPFP49454 3210 aa12.9□□□□□ -0.34
TMEM260-206ENST00000555046 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms