RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-208ENST00000554929 ATF7IPQ6VMQ6 1270 aa12.92□□□□□ -0.34
SRSF5-208ENST00000554929 GIGYF2Q6Y7W6 1299 aaKnown RBP12.92□□□□□ -0.34
SRSF5-208ENST00000554929 DEFB123Q8N688 67 aa12.92□□□□□ -0.34
SRSF5-208ENST00000554929 EYA3Q99504 573 aa12.92□□□□□ -0.34
SRSF5-208ENST00000554929 IFT57Q9NWB7 429 aa12.92□□□□□ -0.34
SRSF5-208ENST00000554929 RGS3P49796 1198 aa12.91□□□□□ -0.34
SRSF5-208ENST00000554929 GPSM2P81274 684 aa12.91□□□□□ -0.34
SRSF5-208ENST00000554929 RSBN1LQ6PCB5 846 aaPredicted RBP12.91□□□□□ -0.34
SRSF5-208ENST00000554929 ANKRD13DQ6ZTN6 518 aa12.91□□□□□ -0.34
SRSF5-208ENST00000554929 MCM10Q7L590 875 aa12.91□□□□□ -0.34
SRSF5-208ENST00000554929 TMC4Q7Z404 712 aa12.91□□□□□ -0.34
SRSF5-208ENST00000554929 AGBL3Q8NEM8 1001 aa12.91□□□□□ -0.34
SRSF5-208ENST00000554929 SH3TC2Q8TF17 1288 aa12.91□□□□□ -0.34
SRSF5-208ENST00000554929 ARHGAP45Q92619 1136 aa12.91□□□□□ -0.34
SRSF5-208ENST00000554929 TSR2Q969E8 191 aaKnown RBP12.91□□□□□ -0.34
SRSF5-208ENST00000554929 SLC10A4Q96EP9 437 aa12.91□□□□□ -0.34
SRSF5-208ENST00000554929 ANGEL1Q9UNK9 670 aaKnown RBP12.91□□□□□ -0.34
SRSF5-208ENST00000554929 STXBP5LQ9Y2K9 1186 aa12.91□□□□□ -0.34
SRSF5-208ENST00000554929 NR2E3Q9Y5X4 410 aa12.91□□□□□ -0.34
SRSF5-208ENST00000554929 LAMB2P55268 1798 aa12.91□□□□□ -0.34
SRSF5-208ENST00000554929 SCN9AQ15858 1988 aa12.9□□□□□ -0.34
SRSF5-208ENST00000554929 A0A1W2PPC1 479 aa12.9□□□□□ -0.34
SRSF5-208ENST00000554929 USP17L8P0C7I0 530 aa12.9□□□□□ -0.34
SRSF5-208ENST00000554929 RLBP1P12271 317 aa12.9□□□□□ -0.34
SRSF5-208ENST00000554929 NBPF9Q3BBW0 867 aa12.9□□□□□ -0.34
SRSF5-208ENST00000554929 OTUD7BQ6GQQ9 843 aa12.9□□□□□ -0.34
SRSF5-208ENST00000554929 Q7L0L9 218 aa12.9□□□□□ -0.34
SRSF5-208ENST00000554929 SSH1Q8WYL5 1049 aa12.9□□□□□ -0.34
SRSF5-208ENST00000554929 RTF1Q92541 710 aaKnown RBP12.9□□□□□ -0.34
SRSF5-208ENST00000554929 HTATIP2Q9BUP3 242 aa12.9□□□□□ -0.34
SRSF5-208ENST00000554929 ZC3H12CQ9C0D7 883 aaKnown RBP12.9□□□□□ -0.34
SRSF5-208ENST00000554929 PRDM6Q9NQX0 595 aa12.9□□□□□ -0.34
SRSF5-208ENST00000554929 DAXXQ9UER7 740 aaPredicted RBP12.9□□□□□ -0.34
SRSF5-208ENST00000554929 FZD1Q9UP38 647 aa12.9□□□□□ -0.34
SRSF5-208ENST00000554929 ANKRD36CQ5JPF3 1778 aa12.89□□□□□ -0.35
SRSF5-208ENST00000554929 DDX60Q8IY21 1712 aaKnown RBP12.89□□□□□ -0.35
SRSF5-208ENST00000554929 HDAC1Q13547 482 aaPredicted RBP12.89□□□□□ -0.35
SRSF5-208ENST00000554929 ARHGEF6Q15052 776 aa12.89□□□□□ -0.35
SRSF5-208ENST00000554929 LDLRAD1Q5T700 205 aa12.89□□□□□ -0.35
SRSF5-208ENST00000554929 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.89□□□□□ -0.35
SRSF5-208ENST00000554929 PHACTR3Q96KR7 559 aa12.89□□□□□ -0.35
SRSF5-208ENST00000554929 MIS18AQ9NYP9 233 aa12.89□□□□□ -0.35
SRSF5-208ENST00000554929 KDM3BQ7LBC6 1761 aa12.89□□□□□ -0.35
SRSF5-208ENST00000554929 RANBP2P49792 3224 aaKnown RBP12.88□□□□□ -0.35
SRSF5-208ENST00000554929 ZBTB7BO15156 539 aaPredicted RBP12.88□□□□□ -0.35
SRSF5-208ENST00000554929 TRIM27P14373 513 aa12.88□□□□□ -0.35
SRSF5-208ENST00000554929 NECTIN2Q92692 538 aa12.88□□□□□ -0.35
SRSF5-208ENST00000554929 STAP2Q9UGK3 403 aa12.88□□□□□ -0.35
SRSF5-208ENST00000554929 PCDHB15Q9Y5E8 787 aa12.88□□□□□ -0.35
SRSF5-208ENST00000554929 ZNF853P0CG23 659 aa12.87□□□□□ -0.35
SRSF5-208ENST00000554929 ZBTB48P10074 688 aaPredicted RBP12.87□□□□□ -0.35
SRSF5-208ENST00000554929 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
SRSF5-208ENST00000554929 RTL5Q5HYW3 569 aaPredicted RBP12.87□□□□□ -0.35
SRSF5-208ENST00000554929 TBC1D16Q8TBP0 767 aa12.87□□□□□ -0.35
SRSF5-208ENST00000554929 OXER1Q8TDS5 423 aa12.87□□□□□ -0.35
SRSF5-208ENST00000554929 CELF1Q92879 486 aaKnown RBP12.87□□□□□ -0.35
SRSF5-208ENST00000554929 SHISA4Q96DD7 197 aa12.87□□□□□ -0.35
SRSF5-208ENST00000554929 WNK4Q96J92 1243 aa12.87□□□□□ -0.35
SRSF5-208ENST00000554929 NOB1Q9ULX3 412 aaKnown RBP12.87□□□□□ -0.35
SRSF5-208ENST00000554929 LRRC37AA6NMS7 1700 aa12.86□□□□□ -0.35
SRSF5-208ENST00000554929 CLMNQ96JQ2 1002 aa12.86□□□□□ -0.35
SRSF5-208ENST00000554929 GMLQ99445 158 aa12.86□□□□□ -0.35
SRSF5-208ENST00000554929 UPF2Q9HAU5 1272 aaKnown RBP12.86□□□□□ -0.35
SRSF5-208ENST00000554929 TRMT112Q9UI30 125 aaKnown RBP12.86□□□□□ -0.35
SRSF5-208ENST00000554929 LAMB4A4D0S4 1761 aa12.86□□□□□ -0.35
SRSF5-208ENST00000554929 MTFR1Q15390 333 aa12.85□□□□□ -0.35
SRSF5-208ENST00000554929 PPP1R15BQ5SWA1 713 aa12.85□□□□□ -0.35
SRSF5-208ENST00000554929 SKAP1Q86WV1 359 aa12.85□□□□□ -0.35
SRSF5-208ENST00000554929 ITPRIPQ8IWB1 547 aa12.85□□□□□ -0.35
SRSF5-208ENST00000554929 MTMR10Q9NXD2 777 aa12.85□□□□□ -0.35
SRSF5-208ENST00000554929 WNT10BO00744 389 aa12.84□□□□□ -0.35
SRSF5-208ENST00000554929 COL9A1P20849 921 aa12.84□□□□□ -0.35
SRSF5-208ENST00000554929 TAF7Q15545 349 aaPredicted RBP12.84□□□□□ -0.35
SRSF5-208ENST00000554929 PTPN18Q99952 460 aa12.84□□□□□ -0.35
SRSF5-208ENST00000554929 THUMPD2Q9BTF0 503 aaKnown RBP12.84□□□□□ -0.35
SRSF5-208ENST00000554929 TNNQ9UQP3 1299 aa12.84□□□□□ -0.35
SRSF5-208ENST00000554929 SH3TC1Q8TE82 1336 aa12.84□□□□□ -0.35
SRSF5-208ENST00000554929 USP17L3A6NCW0 530 aa12.83□□□□□ -0.36
SRSF5-208ENST00000554929 USP17L4A6NCW7 530 aa12.83□□□□□ -0.36
SRSF5-208ENST00000554929 EVI5O60447 810 aa12.83□□□□□ -0.36
SRSF5-208ENST00000554929 VAMP4O75379 141 aa12.83□□□□□ -0.36
SRSF5-208ENST00000554929 UFL1O94874 794 aa12.83□□□□□ -0.36
SRSF5-208ENST00000554929 PBX2P40425 430 aa12.83□□□□□ -0.36
SRSF5-208ENST00000554929 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.364e-10■■■□□ 15
SRSF5-208ENST00000554929 USP17L1Q7RTZ2 530 aa12.83□□□□□ -0.36
SRSF5-208ENST00000554929 NLRP10Q86W26 655 aa12.83□□□□□ -0.36
SRSF5-208ENST00000554929 NKX2-3Q8TAU0 364 aa12.83□□□□□ -0.36
SRSF5-208ENST00000554929 API5Q9BZZ5 524 aaKnown RBP12.83□□□□□ -0.36
SRSF5-208ENST00000554929 ZBTB40Q9NUA8 1239 aa12.83□□□□□ -0.36
SRSF5-208ENST00000554929 LAS1LQ9Y4W2 734 aaKnown RBP12.83□□□□□ -0.36
SRSF5-208ENST00000554929 UNC80Q8N2C7 3258 aa12.82□□□□□ -0.36
SRSF5-208ENST00000554929 SASH1O94885 1247 aa12.82□□□□□ -0.36
SRSF5-208ENST00000554929 MFSD10Q14728 455 aa12.82□□□□□ -0.36
SRSF5-208ENST00000554929 SMC5Q8IY18 1101 aa12.82□□□□□ -0.36
SRSF5-208ENST00000554929 OGFOD1Q8N543 542 aa12.82□□□□□ -0.36
SRSF5-208ENST00000554929 TMEM57Q8N5G2 664 aa12.82□□□□□ -0.36
SRSF5-208ENST00000554929 MRPL50Q8N5N7 158 aaKnown RBP12.82□□□□□ -0.36
SRSF5-208ENST00000554929 ANKIB1Q9P2G1 1089 aa12.82□□□□□ -0.36
SRSF5-208ENST00000554929 ERBB4Q15303 1308 aa12.82□□□□□ -0.36
SRSF5-208ENST00000554929 PPP1R12BO60237 982 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms