RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 TMEM238LA0A1B0GVL6 79 aa4.37□□□□□ -1.71
IFT43-208ENST00000554423 GPR182O15218 404 aa4.37□□□□□ -1.71
IFT43-208ENST00000554423 GAS2O43903 313 aaKnown RBP4.37□□□□□ -1.71
IFT43-208ENST00000554423 PPP2R3AQ06190 1150 aa4.37□□□□□ -1.71
IFT43-208ENST00000554423 EXOSC6Q5RKV6 272 aaKnown RBP4.37□□□□□ -1.71
IFT43-208ENST00000554423 ALG1LQ6GMV1 187 aa4.37□□□□□ -1.71
IFT43-208ENST00000554423 Q6ZS46 218 aa4.37□□□□□ -1.71
IFT43-208ENST00000554423 KIAA1211Q6ZU35 1233 aa4.37□□□□□ -1.71
IFT43-208ENST00000554423 AEBP1Q8IUX7 1158 aa4.37□□□□□ -1.71
IFT43-208ENST00000554423 C12orf50Q8NA57 414 aaPredicted RBP4.37□□□□□ -1.71
IFT43-208ENST00000554423 GIMAP7Q8NHV1 300 aa4.37□□□□□ -1.71
IFT43-208ENST00000554423 FBF1Q8TES7 1133 aa4.37□□□□□ -1.71
IFT43-208ENST00000554423 TCF12Q99081 682 aa4.37□□□□□ -1.71
IFT43-208ENST00000554423 USP26Q9BXU7 913 aa4.37□□□□□ -1.71
IFT43-208ENST00000554423 HIF3AQ9Y2N7 669 aa4.37□□□□□ -1.71
IFT43-208ENST00000554423 DDX3YO15523 660 aaKnown RBP4.36□□□□□ -1.71
IFT43-208ENST00000554423 TREHO43280 583 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 ITPKAP23677 461 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 AP3B2Q13367 1082 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 USPL1Q5W0Q7 1092 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 PRPF40BQ6NWY9 871 aaKnown RBP4.36□□□□□ -1.71
IFT43-208ENST00000554423 DTHD1Q6ZMT9 781 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 PRR23CQ6ZRP0 262 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 AGGF1Q8N302 714 aaeCLIP4.36□□□□□ -1.71
IFT43-208ENST00000554423 UTP4Q969X6 686 aaKnown RBP4.36□□□□□ -1.71
IFT43-208ENST00000554423 MEGF10Q96KG7 1140 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 FRMD6Q96NE9 622 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 ASB16Q96NS5 453 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 CORO1BQ9BR76 489 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 YIPF2Q9BWQ6 316 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 SRCIN1Q9C0H9 1055 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 NPHS2Q9NP85 383 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 KCNK4Q9NYG8 393 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 RAXQ9Y2V3 346 aa4.36□□□□□ -1.71
IFT43-208ENST00000554423 PNMA6FA0A0J9YX94 578 aa4.35□□□□□ -1.71
IFT43-208ENST00000554423 ITGAEP38570 1179 aa4.35□□□□□ -1.71
IFT43-208ENST00000554423 GRIA4P48058 902 aa4.35□□□□□ -1.71
IFT43-208ENST00000554423 USP11P51784 963 aa4.35□□□□□ -1.71
IFT43-208ENST00000554423 POU4F3Q15319 338 aa4.35□□□□□ -1.71
IFT43-208ENST00000554423 ENOX2Q16206 610 aaKnown RBP4.35□□□□□ -1.71
IFT43-208ENST00000554423 SPRED3Q2MJR0 410 aa4.35□□□□□ -1.71
IFT43-208ENST00000554423 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
IFT43-208ENST00000554423 CLEC10AQ8IUN9 316 aa4.35□□□□□ -1.71
IFT43-208ENST00000554423 SMG8Q8ND04 991 aaKnown RBP4.35□□□□□ -1.71
IFT43-208ENST00000554423 UBASH3BQ8TF42 649 aa4.35□□□□□ -1.71
IFT43-208ENST00000554423 FOXD4L4Q8WXT5 416 aaPredicted RBP4.35□□□□□ -1.71
IFT43-208ENST00000554423 SUGCTQ9HAC7 445 aa4.35□□□□□ -1.71
IFT43-208ENST00000554423 RAD18Q9NS91 495 aa4.35□□□□□ -1.71
IFT43-208ENST00000554423 SPG7Q9UQ90 795 aa4.35□□□□□ -1.71
IFT43-208ENST00000554423 SAMM50Q9Y512 469 aa4.35□□□□□ -1.71
IFT43-208ENST00000554423 METTL12A8MUP2 240 aa4.34□□□□□ -1.71
IFT43-208ENST00000554423 ADAM11O75078 769 aa4.34□□□□□ -1.71
IFT43-208ENST00000554423 WISP1O95388 367 aa4.34□□□□□ -1.71
IFT43-208ENST00000554423 B3GALT4O96024 378 aa4.34□□□□□ -1.71
IFT43-208ENST00000554423 IGHA2P01877 340 aa4.34□□□□□ -1.71
IFT43-208ENST00000554423 MAPK8P45983 427 aa4.34□□□□□ -1.71
IFT43-208ENST00000554423 DSC3Q14574 896 aa4.34□□□□□ -1.71
IFT43-208ENST00000554423 COL19A1Q14993 1142 aa4.34□□□□□ -1.71
IFT43-208ENST00000554423 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.34□□□□□ -1.71
IFT43-208ENST00000554423 ADAMTSL4Q6UY14 1074 aa4.34□□□□□ -1.71
IFT43-208ENST00000554423 EPS8L3Q8TE67 593 aaKnown RBP4.34□□□□□ -1.71
IFT43-208ENST00000554423 FAM46AQ96IP4 442 aaKnown RBP4.34□□□□□ -1.71
IFT43-208ENST00000554423 MYRFLQ96LU7 910 aa4.34□□□□□ -1.71
IFT43-208ENST00000554423 UBL7Q96S82 380 aaPredicted RBP4.34□□□□□ -1.71
IFT43-208ENST00000554423 CEP44Q9C0F1 390 aa4.34□□□□□ -1.71
IFT43-208ENST00000554423 KCNF1Q9H3M0 494 aa4.34□□□□□ -1.71
IFT43-208ENST00000554423 LOC100289279A0A1B0GTE1 492 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 TM4SF5O14894 197 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 SLFN14P0C7P3 912 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 BMP3P12645 472 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 FSTP19883 344 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 MAOBP27338 520 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 RXRBP28702 533 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 GSTT1P30711 240 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 SSTR4P31391 388 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 GRM2Q14416 872 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 ZNF423Q2M1K9 1284 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 SND1Q7KZF4 910 aaKnown RBP eCLIP4.33□□□□□ -1.72
IFT43-208ENST00000554423 FAM83CQ9BQN1 747 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 EMILIN2Q9BXX0 1053 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 TMPRSS13Q9BYE2 586 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 KRTAP9-8Q9BYQ0 159 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 BCO2Q9BYV7 579 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 BCL11AQ9H165 835 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 ZNF576Q9H609 170 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 TMEM39AQ9NV64 488 aa4.33□□□□□ -1.72
IFT43-208ENST00000554423 SYNGAP1Q96PV0 1343 aa4.32□□□□□ -1.72
IFT43-208ENST00000554423 GRIK1P39086 918 aa4.32□□□□□ -1.72
IFT43-208ENST00000554423 FCGRTP55899 365 aa4.32□□□□□ -1.72
IFT43-208ENST00000554423 PDE3AQ14432 1141 aa4.32□□□□□ -1.72
IFT43-208ENST00000554423 RNF43Q68DV7 783 aa4.32□□□□□ -1.72
IFT43-208ENST00000554423 PAOXQ6QHF9 649 aa4.32□□□□□ -1.72
IFT43-208ENST00000554423 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.32□□□□□ -1.72
IFT43-208ENST00000554423 BEND4Q6ZU67 534 aa4.32□□□□□ -1.72
IFT43-208ENST00000554423 FAM20CQ8IXL6 584 aa4.32□□□□□ -1.72
IFT43-208ENST00000554423 ABCB6Q9NP58 842 aa4.32□□□□□ -1.72
IFT43-208ENST00000554423 GPN3Q9UHW5 284 aaPredicted RBP4.32□□□□□ -1.72
IFT43-208ENST00000554423 AKAP2Q9Y2D5 859 aa4.32□□□□□ -1.72
IFT43-208ENST00000554423 OAS3Q9Y6K5 1087 aaKnown RBP4.32□□□□□ -1.72
IFT43-208ENST00000554423 IGLV1-40P01703 118 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms