RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 UBN2Q6ZU65 1347 aa14.25□□□□□ -0.13
SHMT2-207ENST00000553837 FGAP02671 866 aa14.25□□□□□ -0.13
SHMT2-207ENST00000553837 PTPN14Q15678 1187 aa14.25□□□□□ -0.13
SHMT2-207ENST00000553837 ANO6Q4KMQ2 910 aa14.25□□□□□ -0.13
SHMT2-207ENST00000553837 METTL24Q5JXM2 366 aa14.25□□□□□ -0.13
SHMT2-207ENST00000553837 LDHAL6AQ6ZMR3 332 aa14.25□□□□□ -0.13
SHMT2-207ENST00000553837 NKX2-3Q8TAU0 364 aa14.25□□□□□ -0.13
SHMT2-207ENST00000553837 CACTINQ8WUQ7 758 aaKnown RBP14.25□□□□□ -0.13
SHMT2-207ENST00000553837 FTOQ9C0B1 505 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHMT2-207ENST00000553837 SCAND2PQ9GZW5 306 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-207ENST00000553837 TNMDQ9H2S6 317 aa14.25□□□□□ -0.13
SHMT2-207ENST00000553837 DACT1Q9NYF0 836 aa14.25□□□□□ -0.13
SHMT2-207ENST00000553837 SALL1Q9NSC2 1324 aa14.25□□□□□ -0.13
SHMT2-207ENST00000553837 ANKRD36CQ5JPF3 1778 aa14.25□□□□□ -0.13
SHMT2-207ENST00000553837 IRS4O14654 1257 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-207ENST00000553837 LLPHQ9BRT6 129 aaKnown RBP14.24□□□□□ -0.13
SHMT2-207ENST00000553837 EFCC1Q9HA90 598 aa14.24□□□□□ -0.13
SHMT2-207ENST00000553837 ZNF215Q9UL58 517 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-207ENST00000553837 COL16A1Q07092 1604 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-207ENST00000553837 NUP98P52948 1817 aa14.24□□□□□ -0.13
SHMT2-207ENST00000553837 COL14A1Q05707 1796 aaKnown RBP14.24□□□□□ -0.13
SHMT2-207ENST00000553837 H3BQV1 296 aa14.24□□□□□ -0.13
SHMT2-207ENST00000553837 CAVIN2O95810 425 aa14.24□□□□□ -0.13
SHMT2-207ENST00000553837 RBM6P78332 1123 aaKnown RBP14.24□□□□□ -0.13
SHMT2-207ENST00000553837 IFFO2Q5TF58 517 aa14.24□□□□□ -0.13
SHMT2-207ENST00000553837 TRMT112Q9UI30 125 aaKnown RBP14.24□□□□□ -0.13
SHMT2-207ENST00000553837 MYO5AQ9Y4I1 1855 aaKnown RBP14.23□□□□□ -0.13
SHMT2-207ENST00000553837 ERICH4A6NGS2 130 aa14.23□□□□□ -0.13
SHMT2-207ENST00000553837 NR1I2O75469 434 aa14.23□□□□□ -0.13
SHMT2-207ENST00000553837 BMS1Q14692 1282 aaKnown RBP14.23□□□□□ -0.13
SHMT2-207ENST00000553837 CKAP2LQ8IYA6 745 aa14.23□□□□□ -0.13
SHMT2-207ENST00000553837 APPBP2Q92624 585 aa14.23□□□□□ -0.13
SHMT2-207ENST00000553837 NOL10Q9BSC4 688 aaKnown RBP14.23□□□□□ -0.13
SHMT2-207ENST00000553837 DENND2AQ9ULE3 1009 aa14.23□□□□□ -0.13
SHMT2-207ENST00000553837 FDPSP14324 419 aaKnown RBP14.23□□□□□ -0.13
SHMT2-207ENST00000553837 ANTXR2P58335 489 aa14.23□□□□□ -0.13
SHMT2-207ENST00000553837 CEBPZQ03701 1054 aaKnown RBP14.23□□□□□ -0.13
SHMT2-207ENST00000553837 FBXO38Q6PIJ6 1188 aa14.23□□□□□ -0.13
SHMT2-207ENST00000553837 LRRC8AQ8IWT6 810 aa14.23□□□□□ -0.13
SHMT2-207ENST00000553837 NBPF3Q9H094 633 aa14.23□□□□□ -0.13
SHMT2-207ENST00000553837 PIH1D3Q9NQM4 214 aaKnown RBP14.23□□□□□ -0.13
SHMT2-207ENST00000553837 DDX19AQ9NUU7 478 aaKnown RBP14.23□□□□□ -0.13
SHMT2-207ENST00000553837 MYH3P11055 1940 aa14.23□□□□□ -0.13
SHMT2-207ENST00000553837 ANKRD18BA2A2Z9 1011 aa14.22□□□□□ -0.13
SHMT2-207ENST00000553837 GOLGA6L4A6NEF3 574 aa14.22□□□□□ -0.13
SHMT2-207ENST00000553837 EXOC5O00471 708 aa14.22□□□□□ -0.13
SHMT2-207ENST00000553837 GPAA1O43292 621 aa14.22□□□□□ -0.13
SHMT2-207ENST00000553837 GUCY1B3Q02153 619 aa14.22□□□□□ -0.13
SHMT2-207ENST00000553837 NYAP1Q6ZVC0 841 aa14.22□□□□□ -0.13
SHMT2-207ENST00000553837 DZIP3Q86Y13 1208 aaKnown RBP14.22□□□□□ -0.13
SHMT2-207ENST00000553837 ZNF274Q96GC6 653 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-207ENST00000553837 CNNM1Q9NRU3 951 aa14.22□□□□□ -0.13
SHMT2-207ENST00000553837 MYH7P12883 1935 aa14.22□□□□□ -0.13
SHMT2-207ENST00000553837 KIF2AO00139 706 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-207ENST00000553837 SNAP23O00161 211 aa14.22□□□□□ -0.13
SHMT2-207ENST00000553837 SLU7O95391 586 aaKnown RBP14.22□□□□□ -0.13
SHMT2-207ENST00000553837 ZFYP08048 801 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-207ENST00000553837 CYP2C19P33261 490 aa14.22□□□□□ -0.13
SHMT2-207ENST00000553837 ZNF165P49910 485 aa14.22□□□□□ -0.13
SHMT2-207ENST00000553837 EVCP57679 992 aa14.22□□□□□ -0.13
SHMT2-207ENST00000553837 NAA16Q6N069 864 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-207ENST00000553837 RBM43Q6ZSC3 357 aaKnown RBP14.22□□□□□ -0.13
SHMT2-207ENST00000553837 MB21D2Q8IYB1 491 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-207ENST00000553837 ZNF34Q8IZ26 560 aa14.22□□□□□ -0.13
SHMT2-207ENST00000553837 HELBQ8NG08 1087 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-207ENST00000553837 MYH15Q9Y2K3 1946 aa14.21□□□□□ -0.13
SHMT2-207ENST00000553837 PLCH1Q4KWH8 1693 aa14.21□□□□□ -0.13
SHMT2-207ENST00000553837 PHKA1P46020 1223 aa14.21□□□□□ -0.13
SHMT2-207ENST00000553837 RAB11FIP4Q86YS3 637 aa14.21□□□□□ -0.13
SHMT2-207ENST00000553837 DHX37Q8IY37 1157 aaKnown RBP14.21□□□□□ -0.13
SHMT2-207ENST00000553837 FBXL16Q8N461 479 aa14.21□□□□□ -0.13
SHMT2-207ENST00000553837 ZSCAN16Q9H4T2 348 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-207ENST00000553837 DOT1LQ8TEK3 1739 aa14.21□□□□□ -0.14
SHMT2-207ENST00000553837 PDE8BO95263 885 aa14.2□□□□□ -0.14
SHMT2-207ENST00000553837 ADD2P35612 726 aa14.2□□□□□ -0.14
SHMT2-207ENST00000553837 ELF2Q15723 593 aa14.2□□□□□ -0.14
SHMT2-207ENST00000553837 CLSTN2Q9H4D0 955 aa14.2□□□□□ -0.14
SHMT2-207ENST00000553837 HPS5Q9UPZ3 1129 aa14.2□□□□□ -0.14
SHMT2-207ENST00000553837 ABCC12Q96J65 1359 aa14.2□□□□□ -0.14
SHMT2-207ENST00000553837 CARMIL3Q8ND23 1372 aa14.2□□□□□ -0.14
SHMT2-207ENST00000553837 PRC1O43663 620 aa14.2□□□□□ -0.14
SHMT2-207ENST00000553837 PDE8AO60658 829 aa14.2□□□□□ -0.14
SHMT2-207ENST00000553837 IL6STP40189 918 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-207ENST00000553837 IMMTQ16891 758 aaKnown RBP14.2□□□□□ -0.14
SHMT2-207ENST00000553837 CCDC144BQ3MJ40 725 aa14.2□□□□□ -0.14
SHMT2-207ENST00000553837 INTS5Q6P9B9 1019 aaKnown RBP14.2□□□□□ -0.14
SHMT2-207ENST00000553837 CCDC144CPQ8IYA2 1237 aa14.2□□□□□ -0.14
SHMT2-207ENST00000553837 USP28Q96RU2 1077 aa14.2□□□□□ -0.14
SHMT2-207ENST00000553837 DDX60Q8IY21 1712 aaKnown RBP14.19□□□□□ -0.14
SHMT2-207ENST00000553837 ROBO1Q9Y6N7 1651 aa14.19□□□□□ -0.14
SHMT2-207ENST00000553837 ERVV-1B6SEH8 477 aa14.19□□□□□ -0.14
SHMT2-207ENST00000553837 SKILP12757 684 aa14.19□□□□□ -0.14
SHMT2-207ENST00000553837 CAPN2P17655 700 aa14.19□□□□□ -0.14
SHMT2-207ENST00000553837 SLC9C2Q5TAH2 1124 aa14.19□□□□□ -0.14
SHMT2-207ENST00000553837 SUSD4Q5VX71 490 aa14.19□□□□□ -0.14
SHMT2-207ENST00000553837 CCDC102BQ68D86 513 aa14.19□□□□□ -0.14
SHMT2-207ENST00000553837 OTUD7BQ6GQQ9 843 aa14.19□□□□□ -0.14
SHMT2-207ENST00000553837 SARM1Q6SZW1 724 aa14.19□□□□□ -0.14
SHMT2-207ENST00000553837 BICD2Q8TD16 824 aa14.19□□□□□ -0.14
SHMT2-207ENST00000553837 MRFAP1L1Q96HT8 127 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms