RNA–Protein interactions for RNA: ENST00000553691.5

VIPAS39-205, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-205ENST00000553691 KCNA3P22001 575 aa8.52□□□□□ -1.05
VIPAS39-205ENST00000553691 TM4SF1P30408 202 aa8.52□□□□□ -1.05
VIPAS39-205ENST00000553691 MAP2K1Q02750 393 aaPredicted RBP8.52□□□□□ -1.05
VIPAS39-205ENST00000553691 TEFQ10587 303 aa8.52□□□□□ -1.05
VIPAS39-205ENST00000553691 GDPD2Q9HCC8 539 aa8.52□□□□□ -1.05
VIPAS39-205ENST00000553691 BTBD11A6QL63 1104 aa8.51□□□□□ -1.05
VIPAS39-205ENST00000553691 ESPNB1AK53 854 aa8.51□□□□□ -1.05
VIPAS39-205ENST00000553691 ABL2P42684 1182 aa8.51□□□□□ -1.05
VIPAS39-205ENST00000553691 VEGFBP49765 207 aa8.51□□□□□ -1.05
VIPAS39-205ENST00000553691 DHX9Q08211 1270 aaKnown RBP8.51□□□□□ -1.05
VIPAS39-205ENST00000553691 NFE2L2Q16236 605 aa8.51□□□□□ -1.05
VIPAS39-205ENST00000553691 USPL1Q5W0Q7 1092 aa8.51□□□□□ -1.05
VIPAS39-205ENST00000553691 THUMPD2Q9BTF0 503 aaKnown RBP8.51□□□□□ -1.05
VIPAS39-205ENST00000553691 PRKRIP1Q9H875 184 aaPredicted RBP8.51□□□□□ -1.05
VIPAS39-205ENST00000553691 NARFQ9UHQ1 456 aa8.51□□□□□ -1.05
VIPAS39-205ENST00000553691 USP16Q9Y5T5 823 aa8.51□□□□□ -1.05
VIPAS39-205ENST00000553691 CASP8AP2Q9UKL3 1982 aa8.51□□□□□ -1.05
VIPAS39-205ENST00000553691 TMEM88BA6NKF7 163 aa8.5□□□□□ -1.05
VIPAS39-205ENST00000553691 A1BGP04217 495 aa8.5□□□□□ -1.05
VIPAS39-205ENST00000553691 HSPA8P11142 646 aaKnown RBP8.5□□□□□ -1.05
VIPAS39-205ENST00000553691 COL11A2P13942 1736 aaPredicted RBP8.5□□□□□ -1.05
VIPAS39-205ENST00000553691 RELBQ01201 579 aa8.5□□□□□ -1.05
VIPAS39-205ENST00000553691 RASSF7Q02833 373 aa8.5□□□□□ -1.05
VIPAS39-205ENST00000553691 MCM6Q14566 821 aa8.5□□□□□ -1.05
VIPAS39-205ENST00000553691 NFIXQ14938 502 aa8.5□□□□□ -1.05
VIPAS39-205ENST00000553691 TTC5Q8N0Z6 440 aa8.5□□□□□ -1.05
VIPAS39-205ENST00000553691 FMNL2Q96PY5 1086 aa8.5□□□□□ -1.05
VIPAS39-205ENST00000553691 CYLDQ9NQC7 956 aa8.5□□□□□ -1.05
VIPAS39-205ENST00000553691 CARMIL3Q8ND23 1372 aa8.49□□□□□ -1.05
VIPAS39-205ENST00000553691 CANXP27824 592 aaKnown RBP8.49□□□□□ -1.05
VIPAS39-205ENST00000553691 CHRNA5P30532 468 aa8.49□□□□□ -1.05
VIPAS39-205ENST00000553691 IRF5Q13568 498 aa8.49□□□□□ -1.05
VIPAS39-205ENST00000553691 NBPF10Q6P3W6 841 aaKnown RBP8.49□□□□□ -1.05
VIPAS39-205ENST00000553691 Q6ZVU0 165 aa8.49□□□□□ -1.05
VIPAS39-205ENST00000553691 NBPF15Q8N660 670 aa8.49□□□□□ -1.05
VIPAS39-205ENST00000553691 ZNF395Q9H8N7 513 aaPredicted RBP8.49□□□□□ -1.05
VIPAS39-205ENST00000553691 MIS18AQ9NYP9 233 aa8.49□□□□□ -1.05
VIPAS39-205ENST00000553691 MAN1A2O60476 641 aa8.48□□□□□ -1.05
VIPAS39-205ENST00000553691 CAMTA2O94983 1202 aa8.48□□□□□ -1.05
VIPAS39-205ENST00000553691 STARD3NLO95772 234 aa8.48□□□□□ -1.05
VIPAS39-205ENST00000553691 ADD1P35611 737 aaKnown RBP8.48□□□□□ -1.05
VIPAS39-205ENST00000553691 IL6STP40189 918 aaPredicted RBP8.48□□□□□ -1.05
VIPAS39-205ENST00000553691 TMPOP42166 694 aaKnown RBP8.48□□□□□ -1.05
VIPAS39-205ENST00000553691 PIP4K2AP48426 406 aaPredicted RBP8.48□□□□□ -1.05
VIPAS39-205ENST00000553691 VAC14Q08AM6 782 aa8.48□□□□□ -1.05
VIPAS39-205ENST00000553691 TAF7Q15545 349 aaPredicted RBP8.48□□□□□ -1.05
VIPAS39-205ENST00000553691 CCDC184Q52MB2 194 aa8.48□□□□□ -1.05
VIPAS39-205ENST00000553691 RTF1Q92541 710 aaKnown RBP8.48□□□□□ -1.05
VIPAS39-205ENST00000553691 TSEN34Q9BSV6 310 aaKnown RBP8.48□□□□□ -1.05
VIPAS39-205ENST00000553691 TEX13AQ9BXU3 409 aaPredicted RBP8.48□□□□□ -1.05
VIPAS39-205ENST00000553691 DICER1Q9UPY3 1922 aaKnown RBP8.47□□□□□ -1.05
VIPAS39-205ENST00000553691 FIGNL2A6NMB9 653 aa8.47□□□□□ -1.05
VIPAS39-205ENST00000553691 LILRA1O75019 489 aa8.47□□□□□ -1.05
VIPAS39-205ENST00000553691 SNRPA1P09661 255 aaKnown RBP8.47□□□□□ -1.05
VIPAS39-205ENST00000553691 EIF4A1P60842 406 aaKnown RBP8.47□□□□□ -1.05
VIPAS39-205ENST00000553691 DEFB115Q30KQ5 88 aa8.47□□□□□ -1.05
VIPAS39-205ENST00000553691 TBC1D9BQ66K14 1250 aa8.47□□□□□ -1.05
VIPAS39-205ENST00000553691 TREML4Q6UXN2 200 aa8.47□□□□□ -1.05
VIPAS39-205ENST00000553691 LRP10Q7Z4F1 713 aa8.47□□□□□ -1.05
VIPAS39-205ENST00000553691 PRM3Q9NNZ6 103 aa8.47□□□□□ -1.05
VIPAS39-205ENST00000553691 ADAMTS8Q9UP79 889 aa8.47□□□□□ -1.05
VIPAS39-205ENST00000553691 NUP98P52948 1817 aa8.46□□□□□ -1.06
VIPAS39-205ENST00000553691 IQCA1LA6NCM1 817 aa8.46□□□□□ -1.06
VIPAS39-205ENST00000553691 TERTO14746 1132 aaKnown RBP8.46□□□□□ -1.06
VIPAS39-205ENST00000553691 WFS1O76024 890 aa8.46□□□□□ -1.06
VIPAS39-205ENST00000553691 NFX1Q12986 1120 aaKnown RBP8.46□□□□□ -1.06
VIPAS39-205ENST00000553691 LDHDQ86WU2 507 aa8.46□□□□□ -1.06
VIPAS39-205ENST00000553691 CCDC146Q8IYE0 955 aa8.46□□□□□ -1.06
VIPAS39-205ENST00000553691 DNMT3LQ9UJW3 386 aa8.46□□□□□ -1.06
VIPAS39-205ENST00000553691 ABT1Q9ULW3 272 aaKnown RBP8.46□□□□□ -1.06
VIPAS39-205ENST00000553691 ZNF330Q9Y3S2 320 aaPredicted RBP8.46□□□□□ -1.06
VIPAS39-205ENST00000553691 ARFGEF2Q9Y6D5 1785 aa8.45□□□□□ -1.06
VIPAS39-205ENST00000553691 THSD7BQ9C0I4 1608 aa8.45□□□□□ -1.06
VIPAS39-205ENST00000553691 SERPINB2P05120 415 aa8.45□□□□□ -1.06
VIPAS39-205ENST00000553691 RIPK4P57078 832 aa8.45□□□□□ -1.06
VIPAS39-205ENST00000553691 TTLL6Q8N841 843 aa8.45□□□□□ -1.06
VIPAS39-205ENST00000553691 POM121Q96HA1 1249 aa8.45□□□□□ -1.06
VIPAS39-205ENST00000553691 INSM2Q96T92 566 aaPredicted RBP8.45□□□□□ -1.06
VIPAS39-205ENST00000553691 RRP7AQ9Y3A4 280 aaKnown RBP8.45□□□□□ -1.06
VIPAS39-205ENST00000553691 MAPK8IP3Q9UPT6 1336 aa8.45□□□□□ -1.06
VIPAS39-205ENST00000553691 A0A087WZG4 1122 aa8.44□□□□□ -1.06
VIPAS39-205ENST00000553691 TTLL8A6PVC2 850 aa8.44□□□□□ -1.06
VIPAS39-205ENST00000553691 CTSOP43234 321 aaPredicted RBP8.44□□□□□ -1.06
VIPAS39-205ENST00000553691 EAPPQ56P03 285 aaPredicted RBP8.44□□□□□ -1.06
VIPAS39-205ENST00000553691 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
VIPAS39-205ENST00000553691 PNISRQ8TF01 805 aaKnown RBP8.44□□□□□ -1.06
VIPAS39-205ENST00000553691 RUNDC1Q96C34 613 aa8.44□□□□□ -1.06
VIPAS39-205ENST00000553691 PNNQ9H307 717 aaKnown RBP8.44□□□□□ -1.06
VIPAS39-205ENST00000553691 POLMQ9NP87 494 aaPredicted RBP8.44□□□□□ -1.06
VIPAS39-205ENST00000553691 NXF1Q9UBU9 619 aaKnown RBP8.44□□□□□ -1.06
VIPAS39-205ENST00000553691 PCDHB11Q9Y5F2 797 aa8.44□□□□□ -1.06
VIPAS39-205ENST00000553691 WDR33Q9C0J8 1336 aaKnown RBP8.44□□□□□ -1.06
VIPAS39-205ENST00000553691 LTBP1Q14766 1721 aa8.43□□□□□ -1.06
VIPAS39-205ENST00000553691 RASSF10A6NK89 507 aa8.43□□□□□ -1.06
VIPAS39-205ENST00000553691 H0YIN7 160 aa8.43□□□□□ -1.06
VIPAS39-205ENST00000553691 CHL1O00533 1208 aa8.43□□□□□ -1.06
VIPAS39-205ENST00000553691 SPINT1O43278 529 aa8.43□□□□□ -1.06
VIPAS39-205ENST00000553691 ADH1AP07327 375 aa8.43□□□□□ -1.06
VIPAS39-205ENST00000553691 ECE1P42892 770 aa8.43□□□□□ -1.06
VIPAS39-205ENST00000553691 SCTRP47872 440 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms