RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 MKRN1Q9UHC7 482 aaKnown RBP4.82□□□□□ -1.64
RDH11-204ENST00000553578 AHDC1Q5TGY3 1603 aaPredicted RBP4.82□□□□□ -1.64
RDH11-204ENST00000553578 ERICH4A6NGS2 130 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 IL13P35225 146 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 CCDC144BQ3MJ40 725 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 PLIN1O60240 522 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 ERCC3P19447 782 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 RRP1P56182 461 aaKnown RBP4.81□□□□□ -1.64
RDH11-204ENST00000553578 SETDB1Q15047 1291 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 NBPF9Q3BBW0 867 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.81□□□□□ -1.649e-12■■□□□ 13.6
RDH11-204ENST00000553578 SLC12A5Q9H2X9 1139 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 SBNO1A3KN83 1393 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 TTC21BQ7Z4L5 1316 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 GDF9O60383 454 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 TERF1P54274 439 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 FAM160A1Q05DH4 1040 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 PDE3AQ14432 1141 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 WASHC4Q2M389 1173 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 NBPF6Q5VWK0 638 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 FERMT3Q86UX7 667 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 NBPF5PQ86XG9 351 aaPredicted RBP4.81□□□□□ -1.64
RDH11-204ENST00000553578 SNRNP27Q8WVK2 155 aaKnown RBP4.81□□□□□ -1.64
RDH11-204ENST00000553578 MRFAP1L1Q96HT8 127 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 NBPF4Q96M43 638 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 LNPKQ9C0E8 428 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 CALCOCO1Q9P1Z2 691 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 DMGDHQ9UI17 866 aaKnown RBP4.81□□□□□ -1.64
RDH11-204ENST00000553578 KIAA0232Q92628 1395 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 CRB1P82279 1406 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 PPP2R5EQ16537 467 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 PTPROQ16827 1216 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 DZIP3Q86Y13 1208 aaKnown RBP4.81□□□□□ -1.64
RDH11-204ENST00000553578 EFCC1Q9HA90 598 aa4.81□□□□□ -1.64
RDH11-204ENST00000553578 CCDC96Q2M329 555 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 TMEM132EQ6IEE7 984 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 ZSCAN30Q86W11 494 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 EPS8L1Q8TE68 723 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 PPP1R14AQ96A00 147 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 ANAPC16Q96DE5 110 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 RBM28Q9NW13 759 aaKnown RBP4.8□□□□□ -1.64
RDH11-204ENST00000553578 PKD2L1Q9P0L9 805 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 ISY1Q9ULR0 285 aaKnown RBP4.8□□□□□ -1.64
RDH11-204ENST00000553578 GPSM3Q9Y4H4 160 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 MRPL42Q9Y6G3 142 aaKnown RBP4.8□□□□□ -1.64
RDH11-204ENST00000553578 TSPY2A6NKD2 308 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 TSPY3P0CV98 308 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 TSPY8P0CW00 308 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 PAX3P23760 479 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 TSPY1Q01534 308 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 MYBPC2Q14324 1141 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 KSR2Q6VAB6 950 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 GRPEL1Q9HAV7 217 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 RSPH14Q9UHP6 348 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 TRAK1Q9UPV9 953 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 HTATSF1O43719 755 aaKnown RBP4.8□□□□□ -1.64
RDH11-204ENST00000553578 EVA1CP58658 441 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 C8orf34Q49A92 452 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 VASH1Q7L8A9 365 aaPredicted RBP4.8□□□□□ -1.64
RDH11-204ENST00000553578 SKAP1Q86WV1 359 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 TPCN2Q8NHX9 752 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 NCAPGQ9BPX3 1015 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 POLKQ9UBT6 870 aa4.8□□□□□ -1.64
RDH11-204ENST00000553578 RGPD2P0DJD1 1756 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 HEG1Q9ULI3 1381 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 ZFYVE27Q5T4F4 411 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 LRCH2Q5VUJ6 765 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 RNF135Q8IUD6 432 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 OTUD6BQ8N6M0 293 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 GGT7Q9UJ14 662 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 DGAT1O75907 488 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 SPTY2D1Q68D10 685 aaPredicted RBP4.79□□□□□ -1.64
RDH11-204ENST00000553578 ARHGAP45Q92619 1136 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 PAIP2Q9BPZ3 127 aaKnown RBP4.79□□□□□ -1.64
RDH11-204ENST00000553578 PPCSQ9HAB8 311 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 METTL14Q9HCE5 456 aaKnown RBP4.79□□□□□ -1.64
RDH11-204ENST00000553578 CDV3Q9UKY7 258 aaKnown RBP4.79□□□□□ -1.64
RDH11-204ENST00000553578 NRAPQ86VF7 1730 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 CPDO75976 1380 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 CEMIPQ8WUJ3 1361 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 RGS12O14924 1447 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 EXOC5O00471 708 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 IPO8O15397 1037 aaKnown RBP4.79□□□□□ -1.64
RDH11-204ENST00000553578 LMNB1P20700 586 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 ZHX3Q9H4I2 956 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 TLL2Q9Y6L7 1015 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 IGSF1Q8N6C5 1336 aa4.79□□□□□ -1.64
RDH11-204ENST00000553578 TMEM94Q12767 1356 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 PIK3CDO00329 1044 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 SOCS7O14512 581 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 NCOA4Q13772 614 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 ALDH1L2Q3SY69 923 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 DNAJC21Q5F1R6 531 aaKnown RBP4.78□□□□□ -1.64
RDH11-204ENST00000553578 UBR7Q8N806 425 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 ADAM32Q8TC27 787 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 NUDT16Q96DE0 195 aaKnown RBP4.78□□□□□ -1.64
RDH11-204ENST00000553578 ACBD3Q9H3P7 528 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 RAI14Q9P0K7 980 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 KCNA6P17658 529 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 HDGFL2Q7Z4V5 671 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms