RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ATP6V0A2Q9Y487 856 aa9.66□□□□□ -0.86
ATXN3-219ENST00000553488 ERBB4Q15303 1308 aa9.65□□□□□ -0.86
ATXN3-219ENST00000553488 CENPFP49454 3210 aa9.65□□□□□ -0.86
ATXN3-219ENST00000553488 TCERG1O14776 1098 aaKnown RBP9.65□□□□□ -0.86
ATXN3-219ENST00000553488 HIRAP54198 1017 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-219ENST00000553488 TRPM4Q8TD43 1214 aa9.65□□□□□ -0.86
ATXN3-219ENST00000553488 ZIC5Q96T25 663 aa9.65□□□□□ -0.86
ATXN3-219ENST00000553488 ZNRF3Q9ULT6 936 aa9.65□□□□□ -0.86
ATXN3-219ENST00000553488 SHTN1A0MZ66 631 aa9.64□□□□□ -0.87
ATXN3-219ENST00000553488 GDF9O60383 454 aa9.64□□□□□ -0.87
ATXN3-219ENST00000553488 MYL6BP14649 208 aa9.64□□□□□ -0.87
ATXN3-219ENST00000553488 PRR20EP86478 221 aa9.64□□□□□ -0.87
ATXN3-219ENST00000553488 PRR20CP86479 221 aa9.64□□□□□ -0.87
ATXN3-219ENST00000553488 PRR20DP86480 221 aa9.64□□□□□ -0.87
ATXN3-219ENST00000553488 PRR20BP86481 221 aa9.64□□□□□ -0.87
ATXN3-219ENST00000553488 PRR20AP86496 221 aa9.64□□□□□ -0.87
ATXN3-219ENST00000553488 KIAA2012Q0VF49 1180 aa9.64□□□□□ -0.87
ATXN3-219ENST00000553488 TPRNQ4KMQ1 711 aa9.64□□□□□ -0.87
ATXN3-219ENST00000553488 PARP10Q53GL7 1025 aa9.64□□□□□ -0.87
ATXN3-219ENST00000553488 SLC10A5Q5PT55 438 aa9.64□□□□□ -0.87
ATXN3-219ENST00000553488 CIAPIN1Q6FI81 312 aa9.64□□□□□ -0.87
ATXN3-219ENST00000553488 PNISRQ8TF01 805 aaKnown RBP9.64□□□□□ -0.87
ATXN3-219ENST00000553488 RRP7AQ9Y3A4 280 aaKnown RBP9.64□□□□□ -0.87
ATXN3-219ENST00000553488 BRCA2P51587 3418 aa9.63□□□□□ -0.87
ATXN3-219ENST00000553488 YDJCA8MPS7 323 aa9.63□□□□□ -0.87
ATXN3-219ENST00000553488 LILRB3O75022 631 aa9.63□□□□□ -0.87
ATXN3-219ENST00000553488 LAPTM4AQ15012 233 aa9.63□□□□□ -0.87
ATXN3-219ENST00000553488 ZNF697Q5TEC3 545 aa9.63□□□□□ -0.87
ATXN3-219ENST00000553488 SUPT20HQ8NEM7 779 aa9.63□□□□□ -0.87
ATXN3-219ENST00000553488 PRR7Q8TB68 274 aa9.63□□□□□ -0.87
ATXN3-219ENST00000553488 CCER1Q8TC90 406 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-219ENST00000553488 DDRGK1Q96HY6 314 aa9.63□□□□□ -0.87
ATXN3-219ENST00000553488 PLEKHF1Q96S99 279 aa9.63□□□□□ -0.87
ATXN3-219ENST00000553488 THUMPD2Q9BTF0 503 aaKnown RBP9.63□□□□□ -0.87
ATXN3-219ENST00000553488 ZNF646O15015 1829 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-219ENST00000553488 FAM155AB1AL88 458 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-219ENST00000553488 GFRA3O60609 400 aa9.62□□□□□ -0.87
ATXN3-219ENST00000553488 RAD17O75943 681 aa9.62□□□□□ -0.87
ATXN3-219ENST00000553488 NOGQ13253 232 aa9.62□□□□□ -0.87
ATXN3-219ENST00000553488 DGKZQ13574 1117 aa9.62□□□□□ -0.87
ATXN3-219ENST00000553488 PROSER3Q2NL68 480 aa9.62□□□□□ -0.87
ATXN3-219ENST00000553488 DPP8Q6V1X1 898 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-219ENST00000553488 CDC37L1Q7L3B6 337 aa9.62□□□□□ -0.87
ATXN3-219ENST00000553488 PPP1R42Q7Z4L9 355 aa9.62□□□□□ -0.87
ATXN3-219ENST00000553488 NLRP3Q96P20 1036 aa9.62□□□□□ -0.87
ATXN3-219ENST00000553488 ZNF408Q9H9D4 720 aa9.62□□□□□ -0.87
ATXN3-219ENST00000553488 CFAP99D6REC4 459 aa9.61□□□□□ -0.87
ATXN3-219ENST00000553488 NRG2O14511 850 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-219ENST00000553488 CLK2P49760 499 aaKnown RBP9.61□□□□□ -0.87
ATXN3-219ENST00000553488 QPCTQ16769 361 aa9.61□□□□□ -0.87
ATXN3-219ENST00000553488 DLK2Q6UY11 383 aa9.61□□□□□ -0.87
ATXN3-219ENST00000553488 SP8Q8IXZ3 490 aa9.61□□□□□ -0.87
ATXN3-219ENST00000553488 UTP14AQ9BVJ6 771 aaKnown RBP9.61□□□□□ -0.87
ATXN3-219ENST00000553488 PKD2L1Q9P0L9 805 aa9.61□□□□□ -0.87
ATXN3-219ENST00000553488 BBOX1O75936 387 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 EGFRP00533 1210 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 ANXA1P04083 346 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
ATXN3-219ENST00000553488 HUNKP57058 714 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 GRAPQ13588 217 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 TNIP1Q15025 636 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 NFE2L2Q16236 605 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 PTPRNQ16849 979 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 SH3D19Q5HYK7 790 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 MPNDQ8N594 471 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 GRAPLQ8TC17 118 aaPredicted RBP9.6□□□□□ -0.87
ATXN3-219ENST00000553488 NUDT12Q9BQG2 462 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 BCL2L13Q9BXK5 485 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 SAGE1Q9NXZ1 904 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 CNOT7Q9UIV1 285 aaKnown RBP9.6□□□□□ -0.87
ATXN3-219ENST00000553488 RTL9Q8NET4 1388 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 PAPPA2Q9BXP8 1791 aa9.6□□□□□ -0.87
ATXN3-219ENST00000553488 ZNF609O15014 1411 aa9.59□□□□□ -0.87
ATXN3-219ENST00000553488 LCE2BO14633 110 aa9.59□□□□□ -0.87
ATXN3-219ENST00000553488 CD2BP2O95400 341 aaKnown RBP9.59□□□□□ -0.87
ATXN3-219ENST00000553488 HCLS1P14317 486 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-219ENST00000553488 SKIV2LQ15477 1246 aaKnown RBP9.59□□□□□ -0.87
ATXN3-219ENST00000553488 PTCRAQ6ISU1 281 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-219ENST00000553488 NLRP10Q86W26 655 aa9.59□□□□□ -0.87
ATXN3-219ENST00000553488 DPF2Q92785 391 aa9.59□□□□□ -0.87
ATXN3-219ENST00000553488 LAMB1P07942 1786 aa9.58□□□□□ -0.88
ATXN3-219ENST00000553488 ADM5C9JUS6 153 aa9.58□□□□□ -0.88
ATXN3-219ENST00000553488 PSMD14O00487 310 aa9.58□□□□□ -0.88
ATXN3-219ENST00000553488 TRIM32Q13049 653 aa9.58□□□□□ -0.88
ATXN3-219ENST00000553488 RGMBQ6NW40 437 aa9.58□□□□□ -0.88
ATXN3-219ENST00000553488 LYPD8Q6UX82 237 aa9.58□□□□□ -0.88
ATXN3-219ENST00000553488 USP48Q86UV5 1035 aa9.58□□□□□ -0.88
ATXN3-219ENST00000553488 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.58□□□□□ -0.88
ATXN3-219ENST00000553488 TMX4Q9H1E5 349 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-219ENST00000553488 GBA2Q9HCG7 927 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-219ENST00000553488 EVA1BQ9NVM1 165 aa9.58□□□□□ -0.88
ATXN3-219ENST00000553488 SH3TC1Q8TE82 1336 aa9.57□□□□□ -0.88
ATXN3-219ENST00000553488 H7C1D1 291 aa9.57□□□□□ -0.88
ATXN3-219ENST00000553488 CCNYL3P0C7X3 344 aa9.57□□□□□ -0.88
ATXN3-219ENST00000553488 SOX10P56693 466 aa9.57□□□□□ -0.88
ATXN3-219ENST00000553488 HSP90AB3PQ58FF7 597 aa9.57□□□□□ -0.88
ATXN3-219ENST00000553488 DDX46Q7L014 1031 aaKnown RBP9.57□□□□□ -0.88
ATXN3-219ENST00000553488 KRT26Q7Z3Y9 468 aa9.57□□□□□ -0.88
ATXN3-219ENST00000553488 TMC4Q7Z404 712 aa9.57□□□□□ -0.88
ATXN3-219ENST00000553488 DBNDD1Q9H9R9 158 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms