RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 GRAPQ13588 217 aa17.07■□□□□ 0.32
SCN8A-207ENST00000551216 NAA16Q6N069 864 aaPredicted RBP17.07■□□□□ 0.32
SCN8A-207ENST00000551216 AMIGO3Q86WK7 504 aa17.07■□□□□ 0.32
SCN8A-207ENST00000551216 IFNL3Q8IZI9 196 aa17.07■□□□□ 0.32
SCN8A-207ENST00000551216 GRAPLQ8TC17 118 aaPredicted RBP17.07■□□□□ 0.32
SCN8A-207ENST00000551216 LEMD3Q9Y2U8 911 aa17.07■□□□□ 0.32
SCN8A-207ENST00000551216 TNRC6CQ9HCJ0 1690 aaKnown RBP17.06■□□□□ 0.32
SCN8A-207ENST00000551216 ELP1O95163 1332 aa17.06■□□□□ 0.32
SCN8A-207ENST00000551216 SNAP23O00161 211 aa17.06■□□□□ 0.32
SCN8A-207ENST00000551216 PHF14O94880 888 aa17.06■□□□□ 0.32
SCN8A-207ENST00000551216 MBD4O95243 580 aa17.06■□□□□ 0.32
SCN8A-207ENST00000551216 UBE2HP62256 183 aa17.06■□□□□ 0.32
SCN8A-207ENST00000551216 RBM6P78332 1123 aaKnown RBP17.06■□□□□ 0.32
SCN8A-207ENST00000551216 CRY2Q49AN0 593 aa17.06■□□□□ 0.32
SCN8A-207ENST00000551216 C15orf52Q6ZUT6 534 aaKnown RBP17.06■□□□□ 0.32
SCN8A-207ENST00000551216 NAPBQ9H115 298 aa17.06■□□□□ 0.32
SCN8A-207ENST00000551216 KIAA1551Q9HCM1 1747 aa17.05■□□□□ 0.32
SCN8A-207ENST00000551216 VPS37CA5D8V6 355 aaPredicted RBP17.05■□□□□ 0.32
SCN8A-207ENST00000551216 HIBADHP31937 336 aaKnown RBP17.05■□□□□ 0.32
SCN8A-207ENST00000551216 GYG1P46976 350 aa17.05■□□□□ 0.32
SCN8A-207ENST00000551216 KRT85P78386 507 aa17.05■□□□□ 0.32
SCN8A-207ENST00000551216 STK3Q13188 491 aa17.05■□□□□ 0.32
SCN8A-207ENST00000551216 CAVIN1Q6NZI2 390 aaKnown RBP17.05■□□□□ 0.32
SCN8A-207ENST00000551216 GIMAP6Q6P9H5 292 aa17.05■□□□□ 0.32
SCN8A-207ENST00000551216 USP48Q86UV5 1035 aa17.05■□□□□ 0.32
SCN8A-207ENST00000551216 FAM184AQ8NB25 1140 aa17.05■□□□□ 0.32
SCN8A-207ENST00000551216 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
SCN8A-207ENST00000551216 KRT23Q9C075 422 aa17.05■□□□□ 0.32
SCN8A-207ENST00000551216 GRPEL1Q9HAV7 217 aa17.05■□□□□ 0.32
SCN8A-207ENST00000551216 MAST2Q6P0Q8 1798 aa17.05■□□□□ 0.32
SCN8A-207ENST00000551216 SALL1Q9NSC2 1324 aa17.05■□□□□ 0.32
SCN8A-207ENST00000551216 CACNA1SQ13698 1873 aa17.05■□□□□ 0.32
SCN8A-207ENST00000551216 GSG1L2A8MUP6 293 aa17.04■□□□□ 0.32
SCN8A-207ENST00000551216 PLSCR1O15162 318 aa17.04■□□□□ 0.32
SCN8A-207ENST00000551216 PCP11498 1178 aaKnown RBP17.04■□□□□ 0.32
SCN8A-207ENST00000551216 GYS1P13807 737 aa17.04■□□□□ 0.32
SCN8A-207ENST00000551216 HAND2P61296 217 aa17.04■□□□□ 0.32
SCN8A-207ENST00000551216 ST5P78524 1137 aa17.04■□□□□ 0.32
SCN8A-207ENST00000551216 APOBRQ0VD83 1088 aa17.04■□□□□ 0.32
SCN8A-207ENST00000551216 ZSCAN23Q3MJ62 389 aa17.04■□□□□ 0.32
SCN8A-207ENST00000551216 ATL3Q6DD88 541 aa17.04■□□□□ 0.32
SCN8A-207ENST00000551216 SCAND2PQ9GZW5 306 aaPredicted RBP17.04■□□□□ 0.32
SCN8A-207ENST00000551216 RNF41Q9H4P4 317 aaPredicted RBP17.04■□□□□ 0.32
SCN8A-207ENST00000551216 ANGEL1Q9UNK9 670 aaKnown RBP17.04■□□□□ 0.32
SCN8A-207ENST00000551216 DUOX1Q9NRD9 1551 aa17.04■□□□□ 0.32
SCN8A-207ENST00000551216 CCDC88AQ3V6T2 1871 aa17.04■□□□□ 0.32
SCN8A-207ENST00000551216 A0A0G2JLW4 131 aa17.03■□□□□ 0.32
SCN8A-207ENST00000551216 NT5C2P49902 561 aa17.03■□□□□ 0.32
SCN8A-207ENST00000551216 TMC4Q7Z404 712 aa17.03■□□□□ 0.32
SCN8A-207ENST00000551216 LRRC2Q9BYS8 371 aa17.03■□□□□ 0.32
SCN8A-207ENST00000551216 NBPF3Q9H094 633 aa17.03■□□□□ 0.32
SCN8A-207ENST00000551216 LETM1O95202 739 aaPredicted RBP17.03■□□□□ 0.32
SCN8A-207ENST00000551216 LIFRP42702 1097 aa17.03■□□□□ 0.32
SCN8A-207ENST00000551216 SPTY2D1Q68D10 685 aaPredicted RBP17.03■□□□□ 0.32
SCN8A-207ENST00000551216 PRR5LQ6MZQ0 368 aa17.03■□□□□ 0.32
SCN8A-207ENST00000551216 SMIM5Q71RC9 77 aa17.03■□□□□ 0.32
SCN8A-207ENST00000551216 STAG1Q8WVM7 1258 aa17.03■□□□□ 0.32
SCN8A-207ENST00000551216 ANAPC4Q9UJX5 808 aa17.03■□□□□ 0.32
SCN8A-207ENST00000551216 IRS2Q9Y4H2 1338 aa17.03■□□□□ 0.32
SCN8A-207ENST00000551216 COL1A1P02452 1464 aaPredicted RBP17.02■□□□□ 0.32
SCN8A-207ENST00000551216 MAGEB6P1A0A0J9YX57 407 aa17.02■□□□□ 0.31
SCN8A-207ENST00000551216 XRCC6P12956 609 aaKnown RBP eCLIP17.02■□□□□ 0.31
SCN8A-207ENST00000551216 CYP7A1P22680 504 aa17.02■□□□□ 0.31
SCN8A-207ENST00000551216 RCAN1P53805 252 aa17.02■□□□□ 0.31
SCN8A-207ENST00000551216 ANTXR2P58335 489 aa17.02■□□□□ 0.31
SCN8A-207ENST00000551216 AKNAD1Q5T1N1 836 aa17.02■□□□□ 0.31
SCN8A-207ENST00000551216 CDC37L1Q7L3B6 337 aa17.02■□□□□ 0.31
SCN8A-207ENST00000551216 SGMS1Q86VZ5 419 aa17.02■□□□□ 0.31
SCN8A-207ENST00000551216 ARMT1Q9H993 441 aa17.02■□□□□ 0.31
SCN8A-207ENST00000551216 RAI14Q9P0K7 980 aa17.02■□□□□ 0.31
SCN8A-207ENST00000551216 CNPY2Q9Y2B0 182 aa17.02■□□□□ 0.31
SCN8A-207ENST00000551216 XDHP47989 1333 aa17.02■□□□□ 0.31
SCN8A-207ENST00000551216 PTPDC1A2A3K4 754 aa17.01■□□□□ 0.31
SCN8A-207ENST00000551216 H3BQV1 296 aa17.01■□□□□ 0.31
SCN8A-207ENST00000551216 TRIM37O94972 964 aa17.01■□□□□ 0.31
SCN8A-207ENST00000551216 HOXA10P31260 410 aaPredicted RBP17.01■□□□□ 0.31
SCN8A-207ENST00000551216 IFFO2Q5TF58 517 aa17.01■□□□□ 0.31
SCN8A-207ENST00000551216 TBC1D10CQ8IV04 446 aa17.01■□□□□ 0.31
SCN8A-207ENST00000551216 TMTC2Q8N394 836 aa17.01■□□□□ 0.31
SCN8A-207ENST00000551216 FLAD1Q8NFF5 587 aa17.01■□□□□ 0.31
SCN8A-207ENST00000551216 RPGRQ92834 1020 aaKnown RBP17.01■□□□□ 0.31
SCN8A-207ENST00000551216 BRIP1Q9BX63 1249 aa17.01■□□□□ 0.31
SCN8A-207ENST00000551216 EPB41L4AQ9HCS5 686 aaPredicted RBP17.01■□□□□ 0.31
SCN8A-207ENST00000551216 ABCF2Q9UG63 623 aa17.01■□□□□ 0.31
SCN8A-207ENST00000551216 SLC4A4Q9Y6R1 1079 aa17.01■□□□□ 0.31
SCN8A-207ENST00000551216 RGPD3A6NKT7 1758 aaPredicted RBP17.01■□□□□ 0.31
SCN8A-207ENST00000551216 RGPD4Q7Z3J3 1758 aa17.01■□□□□ 0.31
SCN8A-207ENST00000551216 KLRG2A4D1S0 409 aaPredicted RBP17■□□□□ 0.31
SCN8A-207ENST00000551216 SH2B2O14492 632 aaPredicted RBP17■□□□□ 0.31
SCN8A-207ENST00000551216 JAK2O60674 1132 aa17■□□□□ 0.31
SCN8A-207ENST00000551216 BBOX1O75936 387 aa17■□□□□ 0.31
SCN8A-207ENST00000551216 CDKL5O76039 1030 aa17■□□□□ 0.31
SCN8A-207ENST00000551216 CTDNEP1O95476 244 aa17■□□□□ 0.31
SCN8A-207ENST00000551216 SERPINB2P05120 415 aa17■□□□□ 0.31
SCN8A-207ENST00000551216 TDO2P48775 406 aa17■□□□□ 0.31
SCN8A-207ENST00000551216 TXNRD1Q16881 649 aa17■□□□□ 0.31
SCN8A-207ENST00000551216 MFSD6Q6ZSS7 791 aa17■□□□□ 0.31
SCN8A-207ENST00000551216 LCORLQ8N3X6 602 aa17■□□□□ 0.31
SCN8A-207ENST00000551216 RBM17Q96I25 401 aaKnown RBP17■□□□□ 0.31
SCN8A-207ENST00000551216 RIOK1Q9BRS2 568 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms