RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 MTMR6Q9Y217 621 aa12.03□□□□□ -0.48
CNOT2-229ENST00000551179 RTCBQ9Y3I0 505 aaKnown RBP12.03□□□□□ -0.48
CNOT2-229ENST00000551179 MYH7P12883 1935 aa12.02□□□□□ -0.49
CNOT2-229ENST00000551179 CPLX1O14810 134 aa12.02□□□□□ -0.49
CNOT2-229ENST00000551179 PFKFB2O60825 505 aa12.02□□□□□ -0.49
CNOT2-229ENST00000551179 CDKL5O76039 1030 aa12.02□□□□□ -0.49
CNOT2-229ENST00000551179 FGFR2P21802 821 aa12.02□□□□□ -0.49
CNOT2-229ENST00000551179 PHKA1P46020 1223 aa12.02□□□□□ -0.49
CNOT2-229ENST00000551179 SYNE4Q8N205 404 aa12.02□□□□□ -0.49
CNOT2-229ENST00000551179 GPT2Q8TD30 523 aa12.02□□□□□ -0.49
CNOT2-229ENST00000551179 ZNF274Q96GC6 653 aaPredicted RBP12.02□□□□□ -0.49
CNOT2-229ENST00000551179 SETDB2Q96T68 719 aa12.02□□□□□ -0.49
CNOT2-229ENST00000551179 CCNL1Q9UK58 526 aaPredicted RBP12.02□□□□□ -0.49
CNOT2-229ENST00000551179 CFAP45Q9UL16 551 aa12.02□□□□□ -0.49
CNOT2-229ENST00000551179 ZMYM6O95789 1325 aa12.02□□□□□ -0.49
CNOT2-229ENST00000551179 DDX60Q8IY21 1712 aaKnown RBP12.02□□□□□ -0.49
CNOT2-229ENST00000551179 BCL9LQ86UU0 1499 aa12.02□□□□□ -0.49
CNOT2-229ENST00000551179 THSD7AQ9UPZ6 1657 aa12.01□□□□□ -0.49
CNOT2-229ENST00000551179 GNPATO15228 680 aa12.01□□□□□ -0.49
CNOT2-229ENST00000551179 RPS6KA4O75676 772 aa12.01□□□□□ -0.49
CNOT2-229ENST00000551179 PDE6AP16499 860 aa12.01□□□□□ -0.49
CNOT2-229ENST00000551179 NBPF5PQ86XG9 351 aaPredicted RBP12.01□□□□□ -0.49
CNOT2-229ENST00000551179 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
CNOT2-229ENST00000551179 ZNF396Q96N95 335 aaPredicted RBP12.01□□□□□ -0.49
CNOT2-229ENST00000551179 NLRP3Q96P20 1036 aa12.01□□□□□ -0.49
CNOT2-229ENST00000551179 NAPBQ9H115 298 aa12.01□□□□□ -0.49
CNOT2-229ENST00000551179 CNNM2Q9H8M5 875 aa12.01□□□□□ -0.49
CNOT2-229ENST00000551179 CNPY2Q9Y2B0 182 aa12.01□□□□□ -0.49
CNOT2-229ENST00000551179 ZNF532Q9HCE3 1301 aa12.01□□□□□ -0.49
CNOT2-229ENST00000551179 CARMIL3Q8ND23 1372 aa12.01□□□□□ -0.49
CNOT2-229ENST00000551179 PTPDC1A2A3K4 754 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 GOLGA8BA8MQT2 603 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 KCNQ2O43526 872 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 PRC1O43663 620 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 CHRNDQ07001 517 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 UBE4AQ14139 1066 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 SCARF1Q14162 830 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 SART3Q15020 963 aaKnown RBP12□□□□□ -0.49
CNOT2-229ENST00000551179 SF3B3Q15393 1217 aaKnown RBP12□□□□□ -0.49
CNOT2-229ENST00000551179 ATL3Q6DD88 541 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 NAA16Q6N069 864 aaPredicted RBP12□□□□□ -0.49
CNOT2-229ENST00000551179 SYNE3Q6ZMZ3 975 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 FAM43AQ8N2R8 423 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 FBXL16Q8N461 479 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 ANKRD2Q9GZV1 360 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 RNF41Q9H4P4 317 aaPredicted RBP12□□□□□ -0.49
CNOT2-229ENST00000551179 LRP2BPQ9P2M1 347 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 NARFQ9UHQ1 456 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 TRPC5Q9UL62 973 aaPredicted RBP12□□□□□ -0.49
CNOT2-229ENST00000551179 ELP1O95163 1332 aa12□□□□□ -0.49
CNOT2-229ENST00000551179 ERICH2A1L162 156 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 SYCE3A1L190 88 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 SEMA3EO15041 775 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 PLCG2P16885 1265 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 TDO2P48775 406 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 DNM1Q05193 864 aaKnown RBP11.99□□□□□ -0.49
CNOT2-229ENST00000551179 APOBRQ0VD83 1088 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 TMED8Q6PL24 325 aaPredicted RBP11.99□□□□□ -0.49
CNOT2-229ENST00000551179 TPTE2Q6XPS3 522 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 BICDL1Q6ZP65 573 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 STOX1Q6ZVD7 989 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 CDC37L1Q7L3B6 337 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 MAGEB6Q8N7X4 407 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 HELBQ8NG08 1087 aaPredicted RBP11.99□□□□□ -0.49
CNOT2-229ENST00000551179 TMEM87BQ96K49 555 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 SPATA32Q96LK8 384 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 AGXT2Q9BYV1 514 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 KRT23Q9C075 422 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 PUS7LQ9H0K6 701 aaKnown RBP11.99□□□□□ -0.49
CNOT2-229ENST00000551179 GDPD2Q9HCC8 539 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 PIH1D3Q9NQM4 214 aaKnown RBP11.99□□□□□ -0.49
CNOT2-229ENST00000551179 BSDC1Q9NW68 430 aaPredicted RBP11.99□□□□□ -0.49
CNOT2-229ENST00000551179 RBM27Q9P2N5 1060 aaKnown RBP11.99□□□□□ -0.49
CNOT2-229ENST00000551179 DENND2AQ9ULE3 1009 aa11.99□□□□□ -0.49
CNOT2-229ENST00000551179 FGAP02671 866 aa11.98□□□□□ -0.49
CNOT2-229ENST00000551179 RFC4P35249 363 aa11.98□□□□□ -0.49
CNOT2-229ENST00000551179 HAND2P61296 217 aa11.98□□□□□ -0.49
CNOT2-229ENST00000551179 EXOSC10Q01780 885 aaKnown RBP11.98□□□□□ -0.49
CNOT2-229ENST00000551179 ST3GAL1Q11201 340 aa11.98□□□□□ -0.49
CNOT2-229ENST00000551179 SCRN1Q12765 414 aa11.98□□□□□ -0.49
CNOT2-229ENST00000551179 RASGRF1Q13972 1273 aa11.98□□□□□ -0.49
CNOT2-229ENST00000551179 ALX1Q15699 326 aa11.98□□□□□ -0.49
CNOT2-229ENST00000551179 ERFEQ4G0M1 354 aa11.98□□□□□ -0.49
CNOT2-229ENST00000551179 PI16Q6UXB8 463 aa11.98□□□□□ -0.49
CNOT2-229ENST00000551179 NFXL1Q6ZNB6 911 aa11.98□□□□□ -0.49
CNOT2-229ENST00000551179 LRRC2Q9BYS8 371 aa11.98□□□□□ -0.49
CNOT2-229ENST00000551179 OCEL1Q9H607 264 aa11.98□□□□□ -0.49
CNOT2-229ENST00000551179 SEC31BQ9NQW1 1179 aa11.98□□□□□ -0.49
CNOT2-229ENST00000551179 TMEM63CQ9P1W3 806 aa11.98□□□□□ -0.49
CNOT2-229ENST00000551179 BTAF1O14981 1849 aa11.97□□□□□ -0.49
CNOT2-229ENST00000551179 KLF18A0A0U1RQI7 1052 aa11.97□□□□□ -0.49
CNOT2-229ENST00000551179 PATL2C9JE40 543 aaKnown RBP11.97□□□□□ -0.49
CNOT2-229ENST00000551179 IGSF3O75054 1194 aa11.97□□□□□ -0.49
CNOT2-229ENST00000551179 MBD4O95243 580 aa11.97□□□□□ -0.49
CNOT2-229ENST00000551179 CHGBP05060 677 aa11.97□□□□□ -0.49
CNOT2-229ENST00000551179 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
CNOT2-229ENST00000551179 SMARCC2Q8TAQ2 1214 aa11.97□□□□□ -0.49
CNOT2-229ENST00000551179 BICD2Q8TD16 824 aa11.97□□□□□ -0.49
CNOT2-229ENST00000551179 DDX11Q96FC9 970 aa11.97□□□□□ -0.49
CNOT2-229ENST00000551179 GJD4Q96KN9 370 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms