RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-206ENST00000550285 PDS5AQ29RF7 1337 aaKnown RBP17.36■□□□□ 0.37
PDE1B-206ENST00000550285 PSDA5PKW4 1024 aaPredicted RBP17.36■□□□□ 0.37
PDE1B-206ENST00000550285 TSGA10IPQ3SY00 556 aa17.36■□□□□ 0.37
PDE1B-206ENST00000550285 NSUN4Q96CB9 384 aaKnown RBP17.36■□□□□ 0.37
PDE1B-206ENST00000550285 IL1R1P14778 569 aa17.35■□□□□ 0.37
PDE1B-206ENST00000550285 AK2P54819 239 aa17.35■□□□□ 0.37
PDE1B-206ENST00000550285 APPP05067 770 aa17.35■□□□□ 0.37
PDE1B-206ENST00000550285 KCNA3P22001 575 aa17.35■□□□□ 0.37
PDE1B-206ENST00000550285 DYNLL1P63167 89 aaKnown RBP17.35■□□□□ 0.37
PDE1B-206ENST00000550285 DOK7Q18PE1 504 aa17.35■□□□□ 0.37
PDE1B-206ENST00000550285 NAA16Q6N069 864 aaPredicted RBP17.35■□□□□ 0.37
PDE1B-206ENST00000550285 RUFY3Q7L099 469 aa17.35■□□□□ 0.37
PDE1B-206ENST00000550285 C7orf43Q8WVR3 580 aa17.35■□□□□ 0.37
PDE1B-206ENST00000550285 TM6SF1Q9BZW5 370 aa17.35■□□□□ 0.37
PDE1B-206ENST00000550285 DPEP1P16444 411 aa17.34■□□□□ 0.37
PDE1B-206ENST00000550285 CNKSR1Q969H4 720 aa17.34■□□□□ 0.37
PDE1B-206ENST00000550285 TMX3Q96JJ7 454 aa17.34■□□□□ 0.37
PDE1B-206ENST00000550285 EPB41L4AQ9HCS5 686 aaPredicted RBP17.34■□□□□ 0.37
PDE1B-206ENST00000550285 CYP46A1Q9Y6A2 500 aa17.34■□□□□ 0.37
PDE1B-206ENST00000550285 PDRG1Q9NUG6 133 aa17.33■□□□□ 0.37
PDE1B-206ENST00000550285 C21orf2O43822 256 aa17.33■□□□□ 0.36
PDE1B-206ENST00000550285 ZC3H12CQ9C0D7 883 aaKnown RBP17.33■□□□□ 0.36
PDE1B-206ENST00000550285 LAMA4Q16363 1823 aa17.33■□□□□ 0.36
PDE1B-206ENST00000550285 GSG1L2A8MUP6 293 aa17.32■□□□□ 0.36
PDE1B-206ENST00000550285 WDR66Q8TBY9 1149 aa17.32■□□□□ 0.36
PDE1B-206ENST00000550285 NEK1Q96PY6 1258 aa17.32■□□□□ 0.36
PDE1B-206ENST00000550285 RIOK1Q9BRS2 568 aaKnown RBP17.32■□□□□ 0.36
PDE1B-206ENST00000550285 NBPF3Q9H094 633 aa17.32■□□□□ 0.36
PDE1B-206ENST00000550285 TMX4Q9H1E5 349 aaPredicted RBP17.32■□□□□ 0.36
PDE1B-206ENST00000550285 MAGEB6P1A0A0J9YX57 407 aa17.32■□□□□ 0.36
PDE1B-206ENST00000550285 PATL2C9JE40 543 aaKnown RBP17.32■□□□□ 0.36
PDE1B-206ENST00000550285 E7EWF7 191 aa17.32■□□□□ 0.36
PDE1B-206ENST00000550285 ZBTB22O15209 634 aa17.32■□□□□ 0.36
PDE1B-206ENST00000550285 HSP90AA1P07900 732 aaKnown RBP17.32■□□□□ 0.36
PDE1B-206ENST00000550285 BLOC1S2Q6QNY1 142 aa17.32■□□□□ 0.36
PDE1B-206ENST00000550285 MTFR1LQ9H019 292 aa17.32■□□□□ 0.36
PDE1B-206ENST00000550285 SLC4A4Q9Y6R1 1079 aa17.32■□□□□ 0.36
PDE1B-206ENST00000550285 SALL1Q9NSC2 1324 aa17.31■□□□□ 0.36
PDE1B-206ENST00000550285 CCDC88AQ3V6T2 1871 aa17.31■□□□□ 0.36
PDE1B-206ENST00000550285 RPS6KB1P23443 525 aa17.31■□□□□ 0.36
PDE1B-206ENST00000550285 PSMA5P28066 241 aa17.31■□□□□ 0.36
PDE1B-206ENST00000550285 GTF2IP78347 998 aa17.31■□□□□ 0.36
PDE1B-206ENST00000550285 IFNL3Q8IZI9 196 aa17.31■□□□□ 0.36
PDE1B-206ENST00000550285 ZGPATQ8N5A5 531 aaKnown RBP17.31■□□□□ 0.36
PDE1B-206ENST00000550285 NKX2-3Q8TAU0 364 aa17.31■□□□□ 0.36
PDE1B-206ENST00000550285 SDR42E1Q8WUS8 393 aa17.31■□□□□ 0.36
PDE1B-206ENST00000550285 KCNQ5Q9NR82 932 aa17.31■□□□□ 0.36
PDE1B-206ENST00000550285 LDHBP07195 334 aaKnown RBP17.31■□□□□ 0.36
PDE1B-206ENST00000550285 DIXDC1Q155Q3 683 aa17.31■□□□□ 0.36
PDE1B-206ENST00000550285 MXD3Q9BW11 206 aa17.31■□□□□ 0.36
PDE1B-206ENST00000550285 LRRC2Q9BYS8 371 aa17.31■□□□□ 0.36
PDE1B-206ENST00000550285 AATFQ9NY61 560 aaKnown RBP eCLIP17.31■□□□□ 0.36
PDE1B-206ENST00000550285 CTNNA3Q9UI47 895 aa17.31■□□□□ 0.36
PDE1B-206ENST00000550285 DLEC1Q9Y238 1755 aa17.3■□□□□ 0.36
PDE1B-206ENST00000550285 DTNBO60941 627 aa17.3■□□□□ 0.36
PDE1B-206ENST00000550285 LARGE1O95461 756 aa17.3■□□□□ 0.36
PDE1B-206ENST00000550285 KRT32Q14532 448 aa17.3■□□□□ 0.36
PDE1B-206ENST00000550285 IMMTQ16891 758 aaKnown RBP17.3■□□□□ 0.36
PDE1B-206ENST00000550285 DZIP1Q86YF9 867 aaKnown RBP17.3■□□□□ 0.36
PDE1B-206ENST00000550285 COA1Q9GZY4 146 aa17.3■□□□□ 0.36
PDE1B-206ENST00000550285 DBNDD1Q9H9R9 158 aa17.3■□□□□ 0.36
PDE1B-206ENST00000550285 INCENPQ9NQS7 918 aa17.3■□□□□ 0.36
PDE1B-206ENST00000550285 KIF13BQ9NQT8 1826 aa17.29■□□□□ 0.36
PDE1B-206ENST00000550285 ZNF213O14771 459 aa17.29■□□□□ 0.36
PDE1B-206ENST00000550285 DDIT3P35638 169 aa17.29■□□□□ 0.36
PDE1B-206ENST00000550285 CHST3Q7LGC8 479 aa17.29■□□□□ 0.36
PDE1B-206ENST00000550285 FBXW7Q969H0 707 aa17.29■□□□□ 0.36
PDE1B-206ENST00000550285 PPP1R1BQ9UD71 204 aaPredicted RBP17.29■□□□□ 0.36
PDE1B-206ENST00000550285 SNED1Q8TER0 1413 aa17.29■□□□□ 0.36
PDE1B-206ENST00000550285 SMIM22K7EJ46 135 aa17.29■□□□□ 0.36
PDE1B-206ENST00000550285 MCM2P49736 904 aa17.29■□□□□ 0.36
PDE1B-206ENST00000550285 MFSD14BQ5SR56 506 aa17.29■□□□□ 0.36
PDE1B-206ENST00000550285 TBC1D10CQ8IV04 446 aa17.29■□□□□ 0.36
PDE1B-206ENST00000550285 TTLL6Q8N841 843 aa17.29■□□□□ 0.36
PDE1B-206ENST00000550285 TOB2Q14106 344 aaPredicted RBP17.28■□□□□ 0.36
PDE1B-206ENST00000550285 SPTY2D1Q68D10 685 aaPredicted RBP17.28■□□□□ 0.36
PDE1B-206ENST00000550285 TACC3Q9Y6A5 838 aa17.28■□□□□ 0.36
PDE1B-206ENST00000550285 MAST2Q6P0Q8 1798 aa17.28■□□□□ 0.36
PDE1B-206ENST00000550285 POLD1P28340 1107 aa17.28■□□□□ 0.36
PDE1B-206ENST00000550285 NAPBQ9H115 298 aa17.28■□□□□ 0.36
PDE1B-206ENST00000550285 KIAA1551Q9HCM1 1747 aa17.27■□□□□ 0.36
PDE1B-206ENST00000550285 CTDSPL2Q05D32 466 aa17.27■□□□□ 0.36
PDE1B-206ENST00000550285 ALX1Q15699 326 aa17.27■□□□□ 0.36
PDE1B-206ENST00000550285 STK11IPQ8N1F8 1099 aa17.27■□□□□ 0.36
PDE1B-206ENST00000550285 KLHL34Q8N239 644 aa17.27■□□□□ 0.36
PDE1B-206ENST00000550285 CERS5Q8N5B7 392 aa17.27■□□□□ 0.36
PDE1B-206ENST00000550285 SGIP1Q9BQI5 828 aa17.27■□□□□ 0.36
PDE1B-206ENST00000550285 RTFDC1Q9BY42 306 aaPredicted RBP17.27■□□□□ 0.36
PDE1B-206ENST00000550285 TPCN1Q9ULQ1 816 aa17.27■□□□□ 0.36
PDE1B-206ENST00000550285 LIMCH1Q9UPQ0 1083 aa17.27■□□□□ 0.36
PDE1B-206ENST00000550285 FAM205AQ6ZU69 1335 aa17.27■□□□□ 0.36
PDE1B-206ENST00000550285 GNAT2P19087 354 aa17.27■□□□□ 0.35
PDE1B-206ENST00000550285 CUL4AQ13619 759 aa17.27■□□□□ 0.35
PDE1B-206ENST00000550285 AOC3Q16853 763 aa17.27■□□□□ 0.35
PDE1B-206ENST00000550285 Q6ZUG5 572 aa17.27■□□□□ 0.35
PDE1B-206ENST00000550285 EYA3Q99504 573 aa17.27■□□□□ 0.35
PDE1B-206ENST00000550285 BAZ2AQ9UIF9 1905 aaKnown RBP17.27■□□□□ 0.35
PDE1B-206ENST00000550285 SRCAPQ6ZRS2 3230 aa17.26■□□□□ 0.35
PDE1B-206ENST00000550285 MYH2Q9UKX2 1941 aa17.26■□□□□ 0.35
PDE1B-206ENST00000550285 G3V3G9 751 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms