RNA–Protein interactions for RNA: ENST00000549040.5

RFX4-208, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-208ENST00000549040 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.09□□□□□ -0.79
RFX4-208ENST00000549040 RTL9Q8NET4 1388 aa10.09□□□□□ -0.79
RFX4-208ENST00000549040 AFDNP55196 1824 aaKnown RBP10.09□□□□□ -0.79
RFX4-208ENST00000549040 COL4A1P02462 1669 aa10.09□□□□□ -0.79
RFX4-208ENST00000549040 HSP90B1P14625 803 aaKnown RBP10.08□□□□□ -0.8
RFX4-208ENST00000549040 POLD1P28340 1107 aa10.08□□□□□ -0.8
RFX4-208ENST00000549040 CHRNA5P30532 468 aa10.08□□□□□ -0.8
RFX4-208ENST00000549040 GUCA2AQ02747 115 aa10.08□□□□□ -0.8
RFX4-208ENST00000549040 CCDC152Q4G0S7 254 aa10.08□□□□□ -0.8
RFX4-208ENST00000549040 B4GALNT3Q6L9W6 998 aa10.08□□□□□ -0.8
RFX4-208ENST00000549040 ATG9AQ7Z3C6 839 aa10.08□□□□□ -0.8
RFX4-208ENST00000549040 EMID1Q96A84 441 aaPredicted RBP10.08□□□□□ -0.8
RFX4-208ENST00000549040 USB1Q9BQ65 265 aaKnown RBP10.08□□□□□ -0.8
RFX4-208ENST00000549040 PUS3Q9BZE2 481 aaKnown RBP10.08□□□□□ -0.8
RFX4-208ENST00000549040 RIPOR2Q9Y4F9 1068 aa10.08□□□□□ -0.8
RFX4-208ENST00000549040 KDM2BQ8NHM5 1336 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 C10orf71Q711Q0 1435 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 DDX60Q8IY21 1712 aaKnown RBP10.07□□□□□ -0.8
RFX4-208ENST00000549040 A0A0G2JLW4 131 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 NPHP1O15259 732 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 SASH1O94885 1247 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 FDX1P10109 184 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 DPEP1P16444 411 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 PDE6BP35913 854 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 RPS8P62241 208 aaKnown RBP10.07□□□□□ -0.8
RFX4-208ENST00000549040 IFIT5Q13325 482 aaKnown RBP10.07□□□□□ -0.8
RFX4-208ENST00000549040 DIXDC1Q155Q3 683 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 LRRC24Q50LG9 513 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 LIAT1Q6ZQX7 453 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 C2CD5Q86YS7 1000 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 SMC5Q8IY18 1101 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 CRAMP1Q96RY5 1269 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 RWDD1Q9H446 243 aaPredicted RBP10.07□□□□□ -0.8
RFX4-208ENST00000549040 CHMP3Q9Y3E7 222 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 CD2APQ9Y5K6 639 aa10.07□□□□□ -0.8
RFX4-208ENST00000549040 TNRC6CQ9HCJ0 1690 aaKnown RBP10.06□□□□□ -0.8
RFX4-208ENST00000549040 ANKRD18BA2A2Z9 1011 aa10.06□□□□□ -0.8
RFX4-208ENST00000549040 WTIPA6NIX2 430 aaPredicted RBP10.06□□□□□ -0.8
RFX4-208ENST00000549040 SURF6O75683 361 aaKnown RBP10.06□□□□□ -0.8
RFX4-208ENST00000549040 NPR1P16066 1061 aa10.06□□□□□ -0.8
RFX4-208ENST00000549040 TGFB2P61812 414 aa10.06□□□□□ -0.8
RFX4-208ENST00000549040 CCDC57Q2TAC2 916 aa10.06□□□□□ -0.8
RFX4-208ENST00000549040 C7orf43Q8WVR3 580 aa10.06□□□□□ -0.8
RFX4-208ENST00000549040 PRDM9Q9NQV7 894 aa10.06□□□□□ -0.8
RFX4-208ENST00000549040 ANKRD31Q8N7Z5 1873 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 MOXD2PA6NHM9 499 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 H0YIN7 160 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 EYA2O00167 538 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 HMMRO75330 724 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 BBOX1O75936 387 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 GRAPQ13588 217 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 PLA2G2CQ5R387 149 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 SPRYD7Q5W111 196 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 STYK1Q6J9G0 422 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 DDX46Q7L014 1031 aaKnown RBP10.05□□□□□ -0.8
RFX4-208ENST00000549040 GRAPLQ8TC17 118 aaPredicted RBP10.05□□□□□ -0.8
RFX4-208ENST00000549040 MASTLQ96GX5 879 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 RBM17Q96I25 401 aaKnown RBP10.05□□□□□ -0.8
RFX4-208ENST00000549040 CCDC136Q96JN2 1154 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 SIL1Q9H173 461 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 BSDC1Q9NW68 430 aaPredicted RBP10.05□□□□□ -0.8
RFX4-208ENST00000549040 PCDHGC3Q9UN70 934 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 EXOC6BQ9Y2D4 811 aa10.05□□□□□ -0.8
RFX4-208ENST00000549040 CIAO1O76071 339 aa10.04□□□□□ -0.8
RFX4-208ENST00000549040 NDUFV2P19404 249 aa10.04□□□□□ -0.8
RFX4-208ENST00000549040 MMP16P51512 607 aa10.04□□□□□ -0.8
RFX4-208ENST00000549040 OLFM4Q6UX06 510 aa10.04□□□□□ -0.8
RFX4-208ENST00000549040 LDHAL6AQ6ZMR3 332 aa10.04□□□□□ -0.8
RFX4-208ENST00000549040 VGLL2Q8N8G2 317 aa10.04□□□□□ -0.8
RFX4-208ENST00000549040 NLGN2Q8NFZ4 835 aa10.04□□□□□ -0.8
RFX4-208ENST00000549040 SYMPKQ92797 1274 aaKnown RBP10.04□□□□□ -0.8
RFX4-208ENST00000549040 RPGRQ92834 1020 aaKnown RBP10.04□□□□□ -0.8
RFX4-208ENST00000549040 TBC1D2Q9BYX2 928 aa10.04□□□□□ -0.8
RFX4-208ENST00000549040 MINPP1Q9UNW1 487 aa10.04□□□□□ -0.8
RFX4-208ENST00000549040 PDZRN3Q9UPQ7 1066 aa10.04□□□□□ -0.8
RFX4-208ENST00000549040 FCF1Q9Y324 198 aaKnown RBP10.04□□□□□ -0.8
RFX4-208ENST00000549040 SNAP23O00161 211 aa10.03□□□□□ -0.8
RFX4-208ENST00000549040 SMARCA5O60264 1052 aaPredicted RBP10.03□□□□□ -0.8
RFX4-208ENST00000549040 GFRA3O60609 400 aa10.03□□□□□ -0.8
RFX4-208ENST00000549040 ALDH1B1P30837 517 aa10.03□□□□□ -0.8
RFX4-208ENST00000549040 NUCB1Q02818 461 aa10.03□□□□□ -0.8
RFX4-208ENST00000549040 G3BP1Q13283 466 aaKnown RBP eCLIP10.03□□□□□ -0.8
RFX4-208ENST00000549040 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
RFX4-208ENST00000549040 ZNF598Q86UK7 904 aaKnown RBP10.03□□□□□ -0.8
RFX4-208ENST00000549040 ANKRD18AQ8IVF6 992 aa10.03□□□□□ -0.8
RFX4-208ENST00000549040 ZNF622Q969S3 477 aaKnown RBP eCLIP10.03□□□□□ -0.8
RFX4-208ENST00000549040 CDC5LQ99459 802 aaKnown RBP10.03□□□□□ -0.8
RFX4-208ENST00000549040 FHDC1Q9C0D6 1143 aaPredicted RBP10.03□□□□□ -0.8
RFX4-208ENST00000549040 LAMB2P55268 1798 aa10.03□□□□□ -0.8
RFX4-208ENST00000549040 RAB11FIP3O75154 756 aa10.02□□□□□ -0.81
RFX4-208ENST00000549040 IL15P40933 162 aaPredicted RBP10.02□□□□□ -0.81
RFX4-208ENST00000549040 TFCP2Q12800 502 aa10.02□□□□□ -0.81
RFX4-208ENST00000549040 RETREG3Q86VR2 466 aa10.02□□□□□ -0.81
RFX4-208ENST00000549040 SP8Q8IXZ3 490 aa10.02□□□□□ -0.81
RFX4-208ENST00000549040 C16orf71Q8IYS4 520 aaPredicted RBP10.02□□□□□ -0.81
RFX4-208ENST00000549040 HELBQ8NG08 1087 aaPredicted RBP10.02□□□□□ -0.81
RFX4-208ENST00000549040 RHPN1Q8TCX5 695 aa10.02□□□□□ -0.81
RFX4-208ENST00000549040 GCC1Q96CN9 775 aa10.02□□□□□ -0.81
RFX4-208ENST00000549040 SYT17Q9BSW7 474 aa10.02□□□□□ -0.81
RFX4-208ENST00000549040 PPP1R1BQ9UD71 204 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms