RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 SLU7O95391 586 aaKnown RBP16.4■□□□□ 0.22
RAPGEF3-218ENST00000548919 SFPQP23246 707 aaKnown RBP eCLIP16.4■□□□□ 0.22
RAPGEF3-218ENST00000548919 ZAP70P43403 619 aa16.4■□□□□ 0.22
RAPGEF3-218ENST00000548919 KIF23Q02241 960 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF3-218ENST00000548919 TJP1Q07157 1748 aa16.4■□□□□ 0.22
RAPGEF3-218ENST00000548919 IMPACTQ9P2X3 320 aa16.4■□□□□ 0.22
RAPGEF3-218ENST00000548919 NLRP12P59046 1061 aa16.4■□□□□ 0.22
RAPGEF3-218ENST00000548919 CCDC158Q5M9N0 1113 aa16.4■□□□□ 0.22
RAPGEF3-218ENST00000548919 ZNF771Q7L3S4 317 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF3-218ENST00000548919 KIF20AO95235 890 aa16.39■□□□□ 0.21
RAPGEF3-218ENST00000548919 FBXL16Q8N461 479 aa16.39■□□□□ 0.21
RAPGEF3-218ENST00000548919 BPIFA3Q9BQP9 254 aa16.39■□□□□ 0.21
RAPGEF3-218ENST00000548919 ERCC6LQ2NKX8 1250 aa16.39■□□□□ 0.21
RAPGEF3-218ENST00000548919 RALYLQ86SE5 291 aaKnown RBP16.39■□□□□ 0.21
RAPGEF3-218ENST00000548919 KCND1Q9NSA2 647 aa16.39■□□□□ 0.21
RAPGEF3-218ENST00000548919 DHX16O60231 1041 aaKnown RBP16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 CCDC57Q2TAC2 916 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 BRAPQ7Z569 592 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 CCDC191Q8NCU4 936 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 NCOA7Q8NI08 942 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 HSD3B7Q9H2F3 369 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 ZNF213O14771 459 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 CIAO1O76071 339 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 FANCCQ00597 558 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 GOLGA8FQ08AF8 430 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 GOLGA8DPQ0D2H9 430 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 CCDC150Q8NCX0 1101 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 DPF2Q92785 391 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 ST7Q9NRC1 585 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 ALS2Q96Q42 1657 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 GPAA1O43292 621 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 CMA1P23946 247 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 SENP2Q9HC62 589 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 ZNF446Q9NWS9 450 aa16.38■□□□□ 0.21
RAPGEF3-218ENST00000548919 PHKBQ93100 1093 aa16.37■□□□□ 0.21
RAPGEF3-218ENST00000548919 CHMP4CQ96CF2 233 aa16.37■□□□□ 0.21
RAPGEF3-218ENST00000548919 NBPF3Q9H094 633 aa16.37■□□□□ 0.21
RAPGEF3-218ENST00000548919 LAMB4A4D0S4 1761 aa16.37■□□□□ 0.21
RAPGEF3-218ENST00000548919 NUP188Q5SRE5 1749 aa16.37■□□□□ 0.21
RAPGEF3-218ENST00000548919 PNOCQ13519 176 aa16.37■□□□□ 0.21
RAPGEF3-218ENST00000548919 CLIC6Q96NY7 704 aa16.37■□□□□ 0.21
RAPGEF3-218ENST00000548919 UBE2Q2LH0YL09 131 aa16.36■□□□□ 0.21
RAPGEF3-218ENST00000548919 SLFN14P0C7P3 912 aa16.36■□□□□ 0.21
RAPGEF3-218ENST00000548919 SYKP43405 635 aa16.36■□□□□ 0.21
RAPGEF3-218ENST00000548919 TPM4P67936 248 aa16.36■□□□□ 0.21
RAPGEF3-218ENST00000548919 KRT222Q8N1A0 295 aa16.36■□□□□ 0.21
RAPGEF3-218ENST00000548919 APPBP2Q92624 585 aa16.36■□□□□ 0.21
RAPGEF3-218ENST00000548919 FAM89AQ96GI7 184 aa16.36■□□□□ 0.21
RAPGEF3-218ENST00000548919 COL18A1P39060 1754 aa16.36■□□□□ 0.21
RAPGEF3-218ENST00000548919 SLC39A14Q15043 492 aa16.36■□□□□ 0.21
RAPGEF3-218ENST00000548919 CYB5R4Q7L1T6 521 aa16.36■□□□□ 0.21
RAPGEF3-218ENST00000548919 HOMER1Q86YM7 354 aa16.36■□□□□ 0.21
RAPGEF3-218ENST00000548919 ALG1Q9BT22 464 aa16.36■□□□□ 0.21
RAPGEF3-218ENST00000548919 KIF2AO00139 706 aaPredicted RBP16.35■□□□□ 0.21
RAPGEF3-218ENST00000548919 HSP90AA4PQ58FG1 418 aa16.35■□□□□ 0.21
RAPGEF3-218ENST00000548919 SHC4Q6S5L8 630 aa16.35■□□□□ 0.21
RAPGEF3-218ENST00000548919 VPS37DQ86XT2 251 aa16.35■□□□□ 0.21
RAPGEF3-218ENST00000548919 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
RAPGEF3-218ENST00000548919 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.35■□□□□ 0.21
RAPGEF3-218ENST00000548919 L2HGDHQ9H9P8 463 aa16.35■□□□□ 0.21
RAPGEF3-218ENST00000548919 SPEF2Q9C093 1822 aa16.35■□□□□ 0.21
RAPGEF3-218ENST00000548919 ZFYP08048 801 aaPredicted RBP16.35■□□□□ 0.21
RAPGEF3-218ENST00000548919 TAF7LQ5H9L4 462 aa16.35■□□□□ 0.21
RAPGEF3-218ENST00000548919 TICAM2Q86XR7 235 aa16.35■□□□□ 0.21
RAPGEF3-218ENST00000548919 TBC1D10CQ8IV04 446 aa16.35■□□□□ 0.21
RAPGEF3-218ENST00000548919 C19orf44Q9H6X5 657 aa16.35■□□□□ 0.21
RAPGEF3-218ENST00000548919 TMEM94Q12767 1356 aa16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 PSDA5PKW4 1024 aaPredicted RBP16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 GABPB1Q06547 395 aaPredicted RBP16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 INCENPQ9NQS7 918 aa16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 ATG3Q9NT62 314 aa16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 DNAI1Q9UI46 699 aa16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 TMEM232C9JQI7 657 aa16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 SERPINC1P01008 464 aa16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 CDC27P30260 824 aa16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 UBASH3AP57075 661 aa16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 LRRFIP1Q32MZ4 808 aaKnown RBP16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 CCDC93Q567U6 631 aa16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 KRT40Q6A162 431 aa16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 MICU3Q86XE3 530 aa16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 MYL10Q9BUA6 226 aa16.34■□□□□ 0.21
RAPGEF3-218ENST00000548919 APPP05067 770 aa16.33■□□□□ 0.21
RAPGEF3-218ENST00000548919 MCAMP43121 646 aa16.33■□□□□ 0.21
RAPGEF3-218ENST00000548919 METAP2P50579 478 aaKnown RBP eCLIP16.33■□□□□ 0.21
RAPGEF3-218ENST00000548919 GNL2Q13823 731 aaKnown RBP16.33■□□□□ 0.21
RAPGEF3-218ENST00000548919 CFAP100Q494V2 611 aa16.33■□□□□ 0.21
RAPGEF3-218ENST00000548919 AKAP2Q9Y2D5 859 aa16.33■□□□□ 0.21
RAPGEF3-218ENST00000548919 C4AP0C0L4 1744 aa16.33■□□□□ 0.2
RAPGEF3-218ENST00000548919 C4BP0C0L5 1744 aa16.33■□□□□ 0.2
RAPGEF3-218ENST00000548919 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.2
RAPGEF3-218ENST00000548919 FANCGO15287 622 aa16.33■□□□□ 0.2
RAPGEF3-218ENST00000548919 SPECC1Q5M775 1068 aa16.33■□□□□ 0.2
RAPGEF3-218ENST00000548919 ANGEL1Q9UNK9 670 aaKnown RBP16.33■□□□□ 0.2
RAPGEF3-218ENST00000548919 IKBKBO14920 756 aa16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 TERF2Q15554 542 aa16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 ZMYM6O95789 1325 aa16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 CPDO75976 1380 aa16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 B4E1Z4 1266 aa16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 FOXN1O15353 648 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms