RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 C12orf49Q9H741 205 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 OSGEPQ9NPF4 335 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 PARP2Q9UGN5 583 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 AK5Q9Y6K8 562 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 METTL12A8MUP2 240 aa7.21□□□□□ -1.26
DEPDC4-205ENST00000548313 LINC01387J3KSC0 135 aa7.21□□□□□ -1.26
DEPDC4-205ENST00000548313 GSTT1P30711 240 aa7.21□□□□□ -1.26
DEPDC4-205ENST00000548313 ARL4DP49703 201 aa7.21□□□□□ -1.26
DEPDC4-205ENST00000548313 IKBKEQ14164 716 aa7.21□□□□□ -1.26
DEPDC4-205ENST00000548313 SETDB1Q15047 1291 aa7.21□□□□□ -1.26
DEPDC4-205ENST00000548313 KLHL23Q8NBE8 558 aa7.21□□□□□ -1.26
DEPDC4-205ENST00000548313 FAM8A1Q9UBU6 413 aa7.21□□□□□ -1.26
DEPDC4-205ENST00000548313 FSCN2O14926 492 aa7.2□□□□□ -1.26
DEPDC4-205ENST00000548313 EIF4BP23588 611 aaKnown RBP7.2□□□□□ -1.26
DEPDC4-205ENST00000548313 FCGRTP55899 365 aa7.2□□□□□ -1.26
DEPDC4-205ENST00000548313 PSMD2Q13200 908 aa7.2□□□□□ -1.26
DEPDC4-205ENST00000548313 DTHD1Q6ZMT9 781 aa7.2□□□□□ -1.26
DEPDC4-205ENST00000548313 ZNF576Q9H609 170 aa7.2□□□□□ -1.26
DEPDC4-205ENST00000548313 SOX17Q9H6I2 414 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-205ENST00000548313 DEAF1O75398 565 aaPredicted RBP7.19□□□□□ -1.26
DEPDC4-205ENST00000548313 ESRRAP11474 423 aaPredicted RBP7.19□□□□□ -1.26
DEPDC4-205ENST00000548313 ZNF16P17020 682 aaPredicted RBP7.19□□□□□ -1.26
DEPDC4-205ENST00000548313 PCDH1Q08174 1060 aa7.19□□□□□ -1.26
DEPDC4-205ENST00000548313 DDX54Q8TDD1 881 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-205ENST00000548313 ANKRD24Q8TF21 1146 aa7.19□□□□□ -1.26
DEPDC4-205ENST00000548313 MEGF10Q96KG7 1140 aa7.19□□□□□ -1.26
DEPDC4-205ENST00000548313 SEC31BQ9NQW1 1179 aa7.19□□□□□ -1.26
DEPDC4-205ENST00000548313 PPM1HQ9ULR3 514 aa7.19□□□□□ -1.26
DEPDC4-205ENST00000548313 DLL1O00548 723 aa7.18□□□□□ -1.26
DEPDC4-205ENST00000548313 SOX1O00570 391 aaPredicted RBP7.18□□□□□ -1.26
DEPDC4-205ENST00000548313 YBX3P16989 372 aaKnown RBP eCLIP7.18□□□□□ -1.26
DEPDC4-205ENST00000548313 FSTP19883 344 aa7.18□□□□□ -1.26
DEPDC4-205ENST00000548313 CDC25BP30305 580 aa7.18□□□□□ -1.26
DEPDC4-205ENST00000548313 TAGLNQ01995 201 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-205ENST00000548313 C19orf57Q0VDD7 668 aa7.18□□□□□ -1.26
DEPDC4-205ENST00000548313 C3orf58Q8NDZ4 430 aa7.18□□□□□ -1.26
DEPDC4-205ENST00000548313 MRS2Q9HD23 443 aa7.18□□□□□ -1.26
DEPDC4-205ENST00000548313 SORBS3O60504 671 aa7.17□□□□□ -1.26
DEPDC4-205ENST00000548313 B3GALT4O96024 378 aa7.17□□□□□ -1.26
DEPDC4-205ENST00000548313 CD68P34810 354 aaPredicted RBP7.17□□□□□ -1.26
DEPDC4-205ENST00000548313 ZNF423Q2M1K9 1284 aa7.17□□□□□ -1.26
DEPDC4-205ENST00000548313 DZIP1LQ8IYY4 767 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-205ENST00000548313 FMNL2Q96PY5 1086 aa7.17□□□□□ -1.26
DEPDC4-205ENST00000548313 AKTIPQ9H8T0 292 aa7.17□□□□□ -1.26
DEPDC4-205ENST00000548313 TM4SF5O14894 197 aa7.16□□□□□ -1.26
DEPDC4-205ENST00000548313 COBLO75128 1261 aa7.16□□□□□ -1.26
DEPDC4-205ENST00000548313 USP17L7P0C7H9 530 aa7.16□□□□□ -1.26
DEPDC4-205ENST00000548313 SSTR4P31391 388 aa7.16□□□□□ -1.26
DEPDC4-205ENST00000548313 IRAK1P51617 712 aa7.16□□□□□ -1.26
DEPDC4-205ENST00000548313 TXNDC11Q6PKC3 985 aa7.16□□□□□ -1.26
DEPDC4-205ENST00000548313 GALNT11Q8NCW6 608 aa7.16□□□□□ -1.26
DEPDC4-205ENST00000548313 SLC7A3Q8WY07 619 aa7.16□□□□□ -1.26
DEPDC4-205ENST00000548313 CEP44Q9C0F1 390 aa7.16□□□□□ -1.26
DEPDC4-205ENST00000548313 RNF19AQ9NV58 838 aa7.16□□□□□ -1.26
DEPDC4-205ENST00000548313 AKAP2Q9Y2D5 859 aa7.16□□□□□ -1.26
DEPDC4-205ENST00000548313 CD97P48960 835 aa7.15□□□□□ -1.26
DEPDC4-205ENST00000548313 PPP2R3AQ06190 1150 aa7.15□□□□□ -1.26
DEPDC4-205ENST00000548313 TMEM130Q8N3G9 435 aa7.15□□□□□ -1.26
DEPDC4-205ENST00000548313 KLHDC7BQ96G42 594 aa7.15□□□□□ -1.26
DEPDC4-205ENST00000548313 MRPL18Q9H0U6 180 aaKnown RBP7.15□□□□□ -1.26
DEPDC4-205ENST00000548313 FAM161BQ96MY7 647 aa7.14□□□□□ -1.27
DEPDC4-205ENST00000548313 CARD10Q9BWT7 1032 aa7.14□□□□□ -1.27
DEPDC4-205ENST00000548313 TMEM39AQ9NV64 488 aa7.14□□□□□ -1.27
DEPDC4-205ENST00000548313 GSC2O15499 205 aa7.13□□□□□ -1.27
DEPDC4-205ENST00000548313 CYP11A1P05108 521 aa7.13□□□□□ -1.27
DEPDC4-205ENST00000548313 GSTM4Q03013 218 aa7.13□□□□□ -1.27
DEPDC4-205ENST00000548313 FAAP100Q0VG06 881 aa7.13□□□□□ -1.27
DEPDC4-205ENST00000548313 AP3B2Q13367 1082 aa7.13□□□□□ -1.27
DEPDC4-205ENST00000548313 FOXD4L4Q8WXT5 416 aaPredicted RBP7.13□□□□□ -1.27
DEPDC4-205ENST00000548313 CRELD1Q96HD1 420 aa7.13□□□□□ -1.27
DEPDC4-205ENST00000548313 VTI1BQ9UEU0 232 aa7.13□□□□□ -1.27
DEPDC4-205ENST00000548313 VAMP1P23763 118 aa7.12□□□□□ -1.27
DEPDC4-205ENST00000548313 ST13P50502 369 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-205ENST00000548313 MRPL58Q14197 206 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-205ENST00000548313 HGSNATQ68CP4 663 aa7.12□□□□□ -1.27
DEPDC4-205ENST00000548313 USP31Q70CQ4 1352 aa7.11□□□□□ -1.27
DEPDC4-205ENST00000548313 TAF1CQ15572 869 aaPredicted RBP7.11□□□□□ -1.27
DEPDC4-205ENST00000548313 DUOXA2Q1HG44 320 aa7.11□□□□□ -1.27
DEPDC4-205ENST00000548313 HP1BP3Q5SSJ5 553 aaPredicted RBP7.11□□□□□ -1.27
DEPDC4-205ENST00000548313 SV2BQ7L1I2 683 aa7.11□□□□□ -1.27
DEPDC4-205ENST00000548313 NECAB3Q96P71 396 aaPredicted RBP7.11□□□□□ -1.27
DEPDC4-205ENST00000548313 KCNK4Q9NYG8 393 aa7.11□□□□□ -1.27
DEPDC4-205ENST00000548313 GPN3Q9UHW5 284 aaPredicted RBP7.11□□□□□ -1.27
DEPDC4-205ENST00000548313 TTF2Q9UNY4 1162 aaKnown RBP7.11□□□□□ -1.27
DEPDC4-205ENST00000548313 SAMM50Q9Y512 469 aa7.11□□□□□ -1.27
DEPDC4-205ENST00000548313 F8W735 103 aaPredicted RBP7.1□□□□□ -1.27
DEPDC4-205ENST00000548313 ADAM11O75078 769 aa7.1□□□□□ -1.27
DEPDC4-205ENST00000548313 CTSHP09668 335 aa7.1□□□□□ -1.27
DEPDC4-205ENST00000548313 TPTE2Q6XPS3 522 aa7.1□□□□□ -1.27
DEPDC4-205ENST00000548313 NRSN2Q9GZP1 204 aa7.1□□□□□ -1.27
DEPDC4-205ENST00000548313 MEGF11A6BM72 1044 aa7.09□□□□□ -1.27
DEPDC4-205ENST00000548313 DDX3YO15523 660 aaKnown RBP7.09□□□□□ -1.27
DEPDC4-205ENST00000548313 ALX3O95076 343 aa7.09□□□□□ -1.27
DEPDC4-205ENST00000548313 TAL1P17542 331 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-205ENST00000548313 NME2P22392 152 aa7.09□□□□□ -1.27
DEPDC4-205ENST00000548313 NLRP12P59046 1061 aa7.09□□□□□ -1.27
DEPDC4-205ENST00000548313 POU4F3Q15319 338 aa7.09□□□□□ -1.27
DEPDC4-205ENST00000548313 TRIM56Q9BRZ2 755 aaKnown RBP7.09□□□□□ -1.27
DEPDC4-205ENST00000548313 EMILIN2Q9BXX0 1053 aa7.09□□□□□ -1.27
DEPDC4-205ENST00000548313 RAXQ9Y2V3 346 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms