RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 FAM205AQ6ZU69 1335 aa10.98□□□□□ -0.65
SMARCC2-205ENST00000548130 MYO3BQ8WXR4 1341 aa10.98□□□□□ -0.65
SMARCC2-205ENST00000548130 ZNF609O15014 1411 aa10.98□□□□□ -0.65
SMARCC2-205ENST00000548130 HMMRO75330 724 aa10.97□□□□□ -0.65
SMARCC2-205ENST00000548130 ITGBL1O95965 494 aaPredicted RBP10.97□□□□□ -0.65
SMARCC2-205ENST00000548130 HTRA3P83110 453 aa10.97□□□□□ -0.65
SMARCC2-205ENST00000548130 FMR1Q06787 632 aaKnown RBP eCLIP10.97□□□□□ -0.652e-6■■■■□ 22
SMARCC2-205ENST00000548130 CCDC102BQ68D86 513 aa10.97□□□□□ -0.65
SMARCC2-205ENST00000548130 OGFOD1Q8N543 542 aa10.97□□□□□ -0.65
SMARCC2-205ENST00000548130 GLIS2Q9BZE0 524 aaPredicted RBP10.97□□□□□ -0.65
SMARCC2-205ENST00000548130 GNL3LQ9NVN8 582 aaKnown RBP10.97□□□□□ -0.65
SMARCC2-205ENST00000548130 APBB1O00213 710 aa10.96□□□□□ -0.65
SMARCC2-205ENST00000548130 TRAF5O00463 557 aa10.96□□□□□ -0.65
SMARCC2-205ENST00000548130 FKBP1AP62942 108 aaKnown RBP10.96□□□□□ -0.65
SMARCC2-205ENST00000548130 SCARF1Q14162 830 aa10.96□□□□□ -0.65
SMARCC2-205ENST00000548130 GRIK5Q16478 980 aa10.96□□□□□ -0.65
SMARCC2-205ENST00000548130 TNNI3KQ59H18 835 aa10.96□□□□□ -0.65
SMARCC2-205ENST00000548130 ZC3H15Q8WU90 426 aaKnown RBP10.96□□□□□ -0.65
SMARCC2-205ENST00000548130 GGA3Q9NZ52 723 aa10.96□□□□□ -0.65
SMARCC2-205ENST00000548130 HDAC9Q9UKV0 1011 aa10.96□□□□□ -0.65
SMARCC2-205ENST00000548130 PCDHB8Q9UN66 801 aa10.96□□□□□ -0.65
SMARCC2-205ENST00000548130 SUPT16HQ9Y5B9 1047 aaKnown RBP10.96□□□□□ -0.65
SMARCC2-205ENST00000548130 PCDHAC2Q9Y5I4 1007 aa10.96□□□□□ -0.65
SMARCC2-205ENST00000548130 FPGT-TNNI3KV9GXZ4 949 aa10.96□□□□□ -0.65
SMARCC2-205ENST00000548130 PASKQ96RG2 1323 aa10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 SEC24BO95487 1268 aa10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 NBPF9Q3BBW0 867 aa10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 GORABQ5T7V8 394 aa10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 ANGEL2Q5VTE6 544 aaKnown RBP10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 DLK2Q6UY11 383 aa10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 MAMSTRQ6ZN01 415 aa10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 USP48Q86UV5 1035 aa10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 TBC1D22AQ8WUA7 517 aa10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 DBNDD2Q9BQY9 259 aa10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 CCDC8Q9H0W5 538 aaPredicted RBP10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 BCL11AQ9H165 835 aa10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 GPR108Q9NPR9 543 aa10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 PGAP2Q9UHJ9 254 aa10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 TTF2Q9UNY4 1162 aaKnown RBP10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 SCAF8Q9UPN6 1271 aaKnown RBP10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 ADAMTSL1Q8N6G6 1762 aa10.95□□□□□ -0.66
SMARCC2-205ENST00000548130 COL1A1P02452 1464 aaPredicted RBP10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 ADM5C9JUS6 153 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 POTEB2H3BUK9 544 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 WNT10BO00744 389 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 APLP1P51693 650 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 RBM5P52756 815 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 RASGRF1Q13972 1273 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 DLGAP5Q15398 846 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 CFAP100Q494V2 611 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 HSP90AB4PQ58FF6 505 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 CDC37L1Q7L3B6 337 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 KRT26Q7Z3Y9 468 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 ERC1Q8IUD2 1116 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 RHPN1Q8TCX5 695 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 DCPSQ96C86 337 aaKnown RBP10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 EAF2Q96CJ1 260 aaPredicted RBP10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 IL1RAPL2Q9NP60 686 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 TLR7Q9NYK1 1049 aaKnown RBP10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 DENND2AQ9ULE3 1009 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 PCDHB15Q9Y5E8 787 aa10.94□□□□□ -0.66
SMARCC2-205ENST00000548130 SEMA3EO15041 775 aa10.93□□□□□ -0.66
SMARCC2-205ENST00000548130 AACSQ86V21 672 aa10.93□□□□□ -0.66
SMARCC2-205ENST00000548130 SULF1Q8IWU6 871 aa10.93□□□□□ -0.66
SMARCC2-205ENST00000548130 WDR66Q8TBY9 1149 aa10.93□□□□□ -0.66
SMARCC2-205ENST00000548130 ZBED3Q96IU2 234 aaPredicted RBP10.93□□□□□ -0.66
SMARCC2-205ENST00000548130 DBNLQ9UJU6 430 aaKnown RBP10.93□□□□□ -0.66
SMARCC2-205ENST00000548130 PSME4Q14997 1843 aa10.93□□□□□ -0.66
SMARCC2-205ENST00000548130 AOX1Q06278 1338 aa10.92□□□□□ -0.66
SMARCC2-205ENST00000548130 RAB11FIP3O75154 756 aa10.92□□□□□ -0.66
SMARCC2-205ENST00000548130 PRDX5P30044 214 aa10.92□□□□□ -0.66
SMARCC2-205ENST00000548130 CRKP46108 304 aa10.92□□□□□ -0.66
SMARCC2-205ENST00000548130 MMP14P50281 582 aa10.92□□□□□ -0.66
SMARCC2-205ENST00000548130 TTC39AQ5SRH9 613 aa10.92□□□□□ -0.66
SMARCC2-205ENST00000548130 PI16Q6UXB8 463 aa10.92□□□□□ -0.66
SMARCC2-205ENST00000548130 KIF1BPQ96EK5 621 aa10.92□□□□□ -0.66
SMARCC2-205ENST00000548130 PRMT6Q96LA8 375 aaPredicted RBP10.92□□□□□ -0.66
SMARCC2-205ENST00000548130 ZNF408Q9H9D4 720 aa10.92□□□□□ -0.66
SMARCC2-205ENST00000548130 HMG20BQ9P0W2 317 aa10.92□□□□□ -0.66
SMARCC2-205ENST00000548130 ZNF646O15015 1829 aaPredicted RBP10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 CLRN2A0PK11 232 aa10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 TMEM88BA6NKF7 163 aa10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 CELF2O95319 508 aaKnown RBP10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 UQCRFS1P1P0C7P4 283 aa10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 ARID4AP29374 1257 aaPredicted RBP10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 MCAMP43121 646 aa10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 CCDC158Q5M9N0 1113 aa10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 SPATA5Q8NB90 893 aa10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 MTMR14Q8NCE2 650 aa10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 EXOC6Q8TAG9 804 aa10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 SNRKQ9NRH2 765 aa10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 ABCF2Q9UG63 623 aa10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 SERPINA10Q9UK55 444 aa10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 SUGT1Q9Y2Z0 365 aa10.91□□□□□ -0.66
SMARCC2-205ENST00000548130 SALL1Q9NSC2 1324 aa10.9□□□□□ -0.66
SMARCC2-205ENST00000548130 SMARCA5O60264 1052 aaPredicted RBP10.9□□□□□ -0.66
SMARCC2-205ENST00000548130 LDHBP07195 334 aaKnown RBP10.9□□□□□ -0.66
SMARCC2-205ENST00000548130 IRX6P78412 446 aaPredicted RBP10.9□□□□□ -0.66
SMARCC2-205ENST00000548130 DIXDC1Q155Q3 683 aa10.9□□□□□ -0.66
SMARCC2-205ENST00000548130 PRAMEF18Q5VWM3 479 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms