RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 KIAA0825Q8IV33 1275 aa11.98□□□□□ -0.49
CDK4-205ENST00000547853 ITPRIPQ8IWB1 547 aa11.98□□□□□ -0.49
CDK4-205ENST00000547853 SH3TC2Q8TF17 1288 aa11.98□□□□□ -0.49
CDK4-205ENST00000547853 SLKQ9H2G2 1235 aaPredicted RBP11.98□□□□□ -0.49
CDK4-205ENST00000547853 ZBTB40Q9NUA8 1239 aa11.98□□□□□ -0.49
CDK4-205ENST00000547853 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
CDK4-205ENST00000547853 VCANP13611 3396 aa11.98□□□□□ -0.49
CDK4-205ENST00000547853 AOX1Q06278 1338 aa11.97□□□□□ -0.49
CDK4-205ENST00000547853 FSD2A1L4K1 749 aa11.97□□□□□ -0.49
CDK4-205ENST00000547853 MMP14P50281 582 aa11.97□□□□□ -0.49
CDK4-205ENST00000547853 BMP2KLQ5H9B9 411 aa11.97□□□□□ -0.49
CDK4-205ENST00000547853 HDGFL1Q5TGJ6 251 aa11.97□□□□□ -0.49
CDK4-205ENST00000547853 OTUD7BQ6GQQ9 843 aa11.97□□□□□ -0.49
CDK4-205ENST00000547853 NBPF11Q86T75 865 aa11.97□□□□□ -0.49
CDK4-205ENST00000547853 TXNRD3Q86VQ6 643 aa11.97□□□□□ -0.49
CDK4-205ENST00000547853 ANKRD18AQ8IVF6 992 aa11.97□□□□□ -0.49
CDK4-205ENST00000547853 SSH1Q8WYL5 1049 aa11.97□□□□□ -0.49
CDK4-205ENST00000547853 FBXW7Q969H0 707 aa11.97□□□□□ -0.49
CDK4-205ENST00000547853 CCDC85AQ96PX6 553 aaPredicted RBP11.97□□□□□ -0.49
CDK4-205ENST00000547853 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.97□□□□□ -0.49
CDK4-205ENST00000547853 PPP2R3BQ9Y5P8 575 aa11.97□□□□□ -0.49
CDK4-205ENST00000547853 SPTBN5Q9NRC6 3674 aaKnown RBP11.97□□□□□ -0.49
CDK4-205ENST00000547853 KLRK1P26718 216 aa11.96□□□□□ -0.49
CDK4-205ENST00000547853 MRE11P49959 708 aa11.96□□□□□ -0.49
CDK4-205ENST00000547853 BRI3BPQ8WY22 251 aa11.96□□□□□ -0.49
CDK4-205ENST00000547853 MS4A4AQ96JQ5 239 aa11.96□□□□□ -0.49
CDK4-205ENST00000547853 GBP4Q96PP9 640 aa11.96□□□□□ -0.49
CDK4-205ENST00000547853 COA1Q9GZY4 146 aa11.96□□□□□ -0.49
CDK4-205ENST00000547853 PPP1R12BO60237 982 aaPredicted RBP11.95□□□□□ -0.5
CDK4-205ENST00000547853 PDE8AO60658 829 aa11.95□□□□□ -0.5
CDK4-205ENST00000547853 PCCAP05165 728 aaPredicted RBP11.95□□□□□ -0.5
CDK4-205ENST00000547853 HOXB7P09629 217 aa11.95□□□□□ -0.5
CDK4-205ENST00000547853 RIPK4P57078 832 aa11.95□□□□□ -0.5
CDK4-205ENST00000547853 ARHGAP39Q9C0H5 1083 aa11.95□□□□□ -0.5
CDK4-205ENST00000547853 RTN4Q9NQC3 1192 aaKnown RBP11.95□□□□□ -0.5
CDK4-205ENST00000547853 DBF4Q9UBU7 674 aaPredicted RBP11.95□□□□□ -0.5
CDK4-205ENST00000547853 NOB1Q9ULX3 412 aaKnown RBP11.95□□□□□ -0.5
CDK4-205ENST00000547853 PCDHAC2Q9Y5I4 1007 aa11.95□□□□□ -0.5
CDK4-205ENST00000547853 A0A1W2PPC1 479 aa11.94□□□□□ -0.5
CDK4-205ENST00000547853 HSP90B1P14625 803 aaKnown RBP11.94□□□□□ -0.5
CDK4-205ENST00000547853 CCT4P50991 539 aaKnown RBP11.94□□□□□ -0.5
CDK4-205ENST00000547853 MFAP1P55081 439 aaKnown RBP11.94□□□□□ -0.5
CDK4-205ENST00000547853 GNAI1P63096 354 aa11.94□□□□□ -0.5
CDK4-205ENST00000547853 TAF1CQ15572 869 aaPredicted RBP11.94□□□□□ -0.5
CDK4-205ENST00000547853 NBPF12Q5TAG4 269 aaPredicted RBP11.94□□□□□ -0.5
CDK4-205ENST00000547853 CHD1LQ86WJ1 897 aa11.94□□□□□ -0.5
CDK4-205ENST00000547853 ANKRD13AQ8IZ07 590 aa11.94□□□□□ -0.5
CDK4-205ENST00000547853 CERS5Q8N5B7 392 aa11.94□□□□□ -0.5
CDK4-205ENST00000547853 MTMR14Q8NCE2 650 aa11.94□□□□□ -0.5
CDK4-205ENST00000547853 OPTNQ96CV9 577 aa11.94□□□□□ -0.5
CDK4-205ENST00000547853 LRCH3Q96II8 777 aa11.94□□□□□ -0.5
CDK4-205ENST00000547853 MINPP1Q9UNW1 487 aa11.94□□□□□ -0.5
CDK4-205ENST00000547853 CHL1O00533 1208 aa11.93□□□□□ -0.5
CDK4-205ENST00000547853 ZBTB7BO15156 539 aaPredicted RBP11.93□□□□□ -0.5
CDK4-205ENST00000547853 USP2O75604 605 aaPredicted RBP11.93□□□□□ -0.5
CDK4-205ENST00000547853 IREB2P48200 963 aaKnown RBP11.93□□□□□ -0.5
CDK4-205ENST00000547853 CTSWP56202 376 aa11.93□□□□□ -0.5
CDK4-205ENST00000547853 LACTBP83111 547 aaPredicted RBP11.93□□□□□ -0.5
CDK4-205ENST00000547853 MTFR1Q15390 333 aa11.93□□□□□ -0.5
CDK4-205ENST00000547853 TMEM57Q8N5G2 664 aa11.93□□□□□ -0.5
CDK4-205ENST00000547853 CNKSR2Q8WXI2 1034 aa11.93□□□□□ -0.5
CDK4-205ENST00000547853 DPF3Q92784 378 aa11.93□□□□□ -0.5
CDK4-205ENST00000547853 JARID2Q92833 1246 aaPredicted RBP11.93□□□□□ -0.5
CDK4-205ENST00000547853 TSR2Q969E8 191 aaKnown RBP11.93□□□□□ -0.5
CDK4-205ENST00000547853 CDC5LQ99459 802 aaKnown RBP11.93□□□□□ -0.5
CDK4-205ENST00000547853 ELP3Q9H9T3 547 aa11.93□□□□□ -0.5
CDK4-205ENST00000547853 IFT57Q9NWB7 429 aa11.93□□□□□ -0.5
CDK4-205ENST00000547853 HYPKQ9NX55 129 aa11.93□□□□□ -0.5
CDK4-205ENST00000547853 TNNQ9UQP3 1299 aa11.93□□□□□ -0.5
CDK4-205ENST00000547853 EYSQ5T1H1 3165 aa11.93□□□□□ -0.5
CDK4-205ENST00000547853 IRS2Q9Y4H2 1338 aa11.92□□□□□ -0.5
CDK4-205ENST00000547853 TTC28Q96AY4 2481 aa11.92□□□□□ -0.5
CDK4-205ENST00000547853 CLRN2A0PK11 232 aa11.92□□□□□ -0.5
CDK4-205ENST00000547853 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
CDK4-205ENST00000547853 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
CDK4-205ENST00000547853 DDIT3P35638 169 aa11.92□□□□□ -0.5
CDK4-205ENST00000547853 ARHGEF6Q15052 776 aa11.92□□□□□ -0.5
CDK4-205ENST00000547853 DLGAP5Q15398 846 aa11.92□□□□□ -0.5
CDK4-205ENST00000547853 TTLL5Q6EMB2 1281 aa11.92□□□□□ -0.5
CDK4-205ENST00000547853 CCDC191Q8NCU4 936 aa11.92□□□□□ -0.5
CDK4-205ENST00000547853 MYD88Q99836 296 aa11.92□□□□□ -0.5
CDK4-205ENST00000547853 API5Q9BZZ5 524 aaKnown RBP11.92□□□□□ -0.5
CDK4-205ENST00000547853 GREM2Q9H772 168 aa11.92□□□□□ -0.5
CDK4-205ENST00000547853 ZFYVE28Q9HCC9 887 aa11.92□□□□□ -0.5
CDK4-205ENST00000547853 BSDC1Q9NW68 430 aaPredicted RBP11.92□□□□□ -0.5
CDK4-205ENST00000547853 LAMA2P24043 3122 aaKnown RBP11.91□□□□□ -0.5
CDK4-205ENST00000547853 CCL15-CCL14A0A0B4J2E2 113 aa11.91□□□□□ -0.5
CDK4-205ENST00000547853 TRAK2O60296 914 aa11.91□□□□□ -0.5
CDK4-205ENST00000547853 GTF2IP78347 998 aa11.91□□□□□ -0.5
CDK4-205ENST00000547853 CCL15Q16663 113 aa11.91□□□□□ -0.5
CDK4-205ENST00000547853 SUPT20HL1Q3ZLR7 823 aa11.91□□□□□ -0.5
CDK4-205ENST00000547853 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
CDK4-205ENST00000547853 CWC25Q9NXE8 425 aaPredicted RBP11.91□□□□□ -0.5
CDK4-205ENST00000547853 PTPRFP10586 1907 aa11.9□□□□□ -0.5
CDK4-205ENST00000547853 GOLGA6L22H0YM25 854 aa11.9□□□□□ -0.5
CDK4-205ENST00000547853 CTGFP29279 349 aa11.9□□□□□ -0.5
CDK4-205ENST00000547853 GJA8P48165 433 aa11.9□□□□□ -0.5
CDK4-205ENST00000547853 VGLL4Q14135 290 aa11.9□□□□□ -0.5
CDK4-205ENST00000547853 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.9□□□□□ -0.5
CDK4-205ENST00000547853 RIC3Q7Z5B4 369 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms