RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	GDF6	Q6KF10	455 aa	Predicted RBP	8.02	□□□□□ -1.13
LGR5-204	ENST00000547310	BEND4	Q6ZU67	534 aa		8.02	□□□□□ -1.13
LGR5-204	ENST00000547310	CCDC74A	Q96AQ1	378 aa		8.02	□□□□□ -1.13
LGR5-204	ENST00000547310	OSMR	Q99650	979 aa		8.02	□□□□□ -1.13
LGR5-204	ENST00000547310	BHLHE41	Q9C0J9	482 aa	Predicted RBP	8.02	□□□□□ -1.13
LGR5-204	ENST00000547310	ADAM19	Q9H013	955 aa		8.02	□□□□□ -1.13
LGR5-204	ENST00000547310	NCAN	O14594	1321 aa		8.02	□□□□□ -1.13
LGR5-204	ENST00000547310	ANKRD33B	A6NCL7	494 aa		8.01	□□□□□ -1.13
LGR5-204	ENST00000547310	PDE2A	O00408	941 aa	Predicted RBP	8.01	□□□□□ -1.13
LGR5-204	ENST00000547310	PRRG2	O14669	202 aa		8.01	□□□□□ -1.13
LGR5-204	ENST00000547310	WISP1	O95388	367 aa		8.01	□□□□□ -1.13
LGR5-204	ENST00000547310	CEP135	Q66GS9	1140 aa		8.01	□□□□□ -1.13
LGR5-204	ENST00000547310	ACAD11	Q709F0	780 aa		8.01	□□□□□ -1.13
LGR5-204	ENST00000547310	GALNT11	Q8NCW6	608 aa		8.01	□□□□□ -1.13
LGR5-204	ENST00000547310	GIMAP7	Q8NHV1	300 aa		8.01	□□□□□ -1.13
LGR5-204	ENST00000547310	FBF1	Q8TES7	1133 aa		8.01	□□□□□ -1.13
LGR5-204	ENST00000547310	NXPE3	Q969Y0	559 aa		8.01	□□□□□ -1.13
LGR5-204	ENST00000547310	POP1	Q99575	1024 aa	Known RBP	8.01	□□□□□ -1.13
LGR5-204	ENST00000547310	ZKSCAN3	Q9BRR0	538 aa		8.01	□□□□□ -1.13
LGR5-204	ENST00000547310	TRIM33	Q9UPN9	1127 aa		8.01	□□□□□ -1.13
LGR5-204	ENST00000547310	LEMD3	Q9Y2U8	911 aa		8.01	□□□□□ -1.13
LGR5-204	ENST00000547310		A0A1W2PP55	124 aa		8	□□□□□ -1.13
LGR5-204	ENST00000547310	FARP2	O94887	1054 aa	Predicted RBP	8	□□□□□ -1.13
LGR5-204	ENST00000547310	ZNF865	P0CJ78	1059 aa	Predicted RBP	8	□□□□□ -1.13
LGR5-204	ENST00000547310	CD68	P34810	354 aa	Predicted RBP	8	□□□□□ -1.13
LGR5-204	ENST00000547310	TRIM26	Q12899	539 aa	Predicted RBP	8	□□□□□ -1.13
LGR5-204	ENST00000547310	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	8	□□□□□ -1.13
LGR5-204	ENST00000547310	AGBL5	Q8NDL9	886 aa		8	□□□□□ -1.13
LGR5-204	ENST00000547310	PPME1	Q9Y570	386 aa		8	□□□□□ -1.13
LGR5-204	ENST00000547310	TM4SF5	O14894	197 aa		7.99	□□□□□ -1.13
LGR5-204	ENST00000547310	PAPLN	O95428	1278 aa		7.99	□□□□□ -1.13
LGR5-204	ENST00000547310	POLR3D	P05423	398 aa	Predicted RBP	7.99	□□□□□ -1.13
LGR5-204	ENST00000547310	ACPP	P15309	386 aa		7.99	□□□□□ -1.13
LGR5-204	ENST00000547310	ALG1L	Q6GMV1	187 aa		7.99	□□□□□ -1.13
LGR5-204	ENST00000547310	KIAA1211	Q6ZU35	1233 aa		7.99	□□□□□ -1.13
LGR5-204	ENST00000547310	NPAS4	Q8IUM7	802 aa		7.99	□□□□□ -1.13
LGR5-204	ENST00000547310	CCNJL	Q8IV13	435 aa		7.99	□□□□□ -1.13
LGR5-204	ENST00000547310	KRTAP9-8	Q9BYQ0	159 aa		7.99	□□□□□ -1.13
LGR5-204	ENST00000547310	LATS2	Q9NRM7	1088 aa		7.99	□□□□□ -1.13
LGR5-204	ENST00000547310	HIF3A	Q9Y2N7	669 aa		7.99	□□□□□ -1.13
LGR5-204	ENST00000547310	PNMA6F	A0A0J9YX94	578 aa		7.98	□□□□□ -1.13
LGR5-204	ENST00000547310	P4HB	P07237	508 aa	Known RBP	7.98	□□□□□ -1.13
LGR5-204	ENST00000547310	BMP3	P12645	472 aa		7.98	□□□□□ -1.13
LGR5-204	ENST00000547310	PTPRA	P18433	802 aa		7.98	□□□□□ -1.13
LGR5-204	ENST00000547310	FGD1	P98174	961 aa		7.98	□□□□□ -1.13
LGR5-204	ENST00000547310	PKN1	Q16512	942 aa		7.98	□□□□□ -1.13
LGR5-204	ENST00000547310	TMCO4	Q5TGY1	634 aa		7.98	□□□□□ -1.13
LGR5-204	ENST00000547310	ADAMTSL4	Q6UY14	1074 aa		7.98	□□□□□ -1.13
LGR5-204	ENST00000547310	TCF12	Q99081	682 aa		7.98	□□□□□ -1.13
LGR5-204	ENST00000547310	NPHS2	Q9NP85	383 aa		7.98	□□□□□ -1.13
LGR5-204	ENST00000547310	ATG3	Q9NT62	314 aa		7.98	□□□□□ -1.13
LGR5-204	ENST00000547310	CDC27	P30260	824 aa		7.97	□□□□□ -1.13
LGR5-204	ENST00000547310	LILRA6	Q6PI73	481 aa		7.97	□□□□□ -1.13
LGR5-204	ENST00000547310	KCNF1	Q9H3M0	494 aa		7.97	□□□□□ -1.13
LGR5-204	ENST00000547310	SOX13	Q9UN79	622 aa		7.97	□□□□□ -1.13
LGR5-204	ENST00000547310	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.97	□□□□□ -1.13
LGR5-204	ENST00000547310	MAPK8	P45983	427 aa		7.96	□□□□□ -1.14
LGR5-204	ENST00000547310	PRPF40B	Q6NWY9	871 aa	Known RBP	7.96	□□□□□ -1.14
LGR5-204	ENST00000547310	BSND	Q8WZ55	320 aa		7.96	□□□□□ -1.14
LGR5-204	ENST00000547310	MFSD14A	Q96MC6	490 aa		7.96	□□□□□ -1.14
LGR5-204	ENST00000547310	HHIP	Q96QV1	700 aa		7.96	□□□□□ -1.14
LGR5-204	ENST00000547310	BSDC1	Q9NW68	430 aa	Predicted RBP	7.96	□□□□□ -1.14
LGR5-204	ENST00000547310	KCNK4	Q9NYG8	393 aa		7.96	□□□□□ -1.14
LGR5-204	ENST00000547310	TRPA1	O75762	1119 aa		7.95	□□□□□ -1.14
LGR5-204	ENST00000547310	ATP2B2	Q01814	1243 aa		7.95	□□□□□ -1.14
LGR5-204	ENST00000547310	PTPN12	Q05209	780 aa	Known RBP	7.95	□□□□□ -1.14
LGR5-204	ENST00000547310	FBXO33	Q7Z6M2	555 aa		7.95	□□□□□ -1.14
LGR5-204	ENST00000547310	EPS8L3	Q8TE67	593 aa	Known RBP	7.95	□□□□□ -1.14
LGR5-204	ENST00000547310	WNT8B	Q93098	351 aa		7.95	□□□□□ -1.14
LGR5-204	ENST00000547310	LIN7B	Q9HAP6	207 aa		7.95	□□□□□ -1.14
LGR5-204	ENST00000547310	NLRP2	Q9NX02	1062 aa		7.95	□□□□□ -1.14
LGR5-204	ENST00000547310	TRAK1	Q9UPV9	953 aa		7.95	□□□□□ -1.14
LGR5-204	ENST00000547310	CARMIL2	Q6F5E8	1435 aa		7.95	□□□□□ -1.14
LGR5-204	ENST00000547310	GIPC1	O14908	333 aa		7.94	□□□□□ -1.14
LGR5-204	ENST00000547310	GLIS3	Q8NEA6	775 aa		7.94	□□□□□ -1.14
LGR5-204	ENST00000547310	FRMD6	Q96NE9	622 aa		7.94	□□□□□ -1.14
LGR5-204	ENST00000547310	SRCIN1	Q9C0H9	1055 aa		7.94	□□□□□ -1.14
LGR5-204	ENST00000547310	LACRT	Q9GZZ8	138 aa		7.94	□□□□□ -1.14
LGR5-204	ENST00000547310	EHD4	Q9H223	541 aa		7.94	□□□□□ -1.14
LGR5-204	ENST00000547310	FAM177B	A6PVY3	158 aa		7.93	□□□□□ -1.14
LGR5-204	ENST00000547310	BIN1	O00499	593 aa		7.93	□□□□□ -1.14
LGR5-204	ENST00000547310	SART1	O43290	800 aa	Known RBP	7.93	□□□□□ -1.14
LGR5-204	ENST00000547310	PRPF40A	O75400	957 aa	Known RBP	7.93	□□□□□ -1.14
LGR5-204	ENST00000547310	F13B	P05160	661 aa		7.93	□□□□□ -1.14
LGR5-204	ENST00000547310	LDHB	P07195	334 aa	Known RBP	7.93	□□□□□ -1.14
LGR5-204	ENST00000547310	EPHA1	P21709	976 aa		7.93	□□□□□ -1.14
LGR5-204	ENST00000547310	ITPKA	P23677	461 aa		7.93	□□□□□ -1.14
LGR5-204	ENST00000547310	GRM2	Q14416	872 aa		7.93	□□□□□ -1.14
LGR5-204	ENST00000547310	DUOXA2	Q1HG44	320 aa		7.93	□□□□□ -1.14
LGR5-204	ENST00000547310	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	7.93	□□□□□ -1.14
LGR5-204	ENST00000547310	EAPP	Q56P03	285 aa	Predicted RBP	7.93	□□□□□ -1.14
LGR5-204	ENST00000547310	ANKRD34A	Q69YU3	496 aa		7.93	□□□□□ -1.14
LGR5-204	ENST00000547310	VN1R5	Q7Z5H4	357 aa		7.93	□□□□□ -1.14
LGR5-204	ENST00000547310		A0A096LPE4	126 aa		7.92	□□□□□ -1.14
LGR5-204	ENST00000547310		A0A1W2PPZ6	126 aa		7.92	□□□□□ -1.14
LGR5-204	ENST00000547310		B8ZZF3	427 aa		7.92	□□□□□ -1.14
LGR5-204	ENST00000547310		H3BRJ5	948 aa		7.92	□□□□□ -1.14
LGR5-204	ENST00000547310	LINC01387	J3KSC0	135 aa		7.92	□□□□□ -1.14
LGR5-204	ENST00000547310	EIF4EBP3	O60516	100 aa	Predicted RBP	7.92	□□□□□ -1.14
LGR5-204	ENST00000547310	GADD45B	O75293	160 aa	Predicted RBP	7.92	□□□□□ -1.14

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