RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 GRK4P32298 578 aa12.6□□□□□ -0.39
R3HDM2-210ENST00000547019 GTF2A2P52657 109 aa12.6□□□□□ -0.39
R3HDM2-210ENST00000547019 ARHGEF6Q15052 776 aa12.6□□□□□ -0.39
R3HDM2-210ENST00000547019 CCDC191Q8NCU4 936 aa12.6□□□□□ -0.39
R3HDM2-210ENST00000547019 U2AF1L4Q8WU68 220 aaKnown RBP12.6□□□□□ -0.39
R3HDM2-210ENST00000547019 TSR2Q969E8 191 aaKnown RBP12.6□□□□□ -0.39
R3HDM2-210ENST00000547019 SRRDQ9UH36 339 aa12.6□□□□□ -0.39
R3HDM2-210ENST00000547019 RIPOR2Q9Y4F9 1068 aa12.6□□□□□ -0.39
R3HDM2-210ENST00000547019 NR2E3Q9Y5X4 410 aa12.6□□□□□ -0.39
R3HDM2-210ENST00000547019 DOCK3Q8IZD9 2030 aa12.6□□□□□ -0.39
R3HDM2-210ENST00000547019 MUC3AQ02505 3323 aa12.6□□□□□ -0.39
R3HDM2-210ENST00000547019 FANCIQ9NVI1 1328 aa12.6□□□□□ -0.39
R3HDM2-210ENST00000547019 DDX60LQ5H9U9 1706 aaKnown RBP12.59□□□□□ -0.39
R3HDM2-210ENST00000547019 HOXB7P09629 217 aa12.59□□□□□ -0.39
R3HDM2-210ENST00000547019 C17orf99Q6UX52 265 aa12.59□□□□□ -0.39
R3HDM2-210ENST00000547019 WDR63Q8IWG1 891 aa12.59□□□□□ -0.39
R3HDM2-210ENST00000547019 NKX2-3Q8TAU0 364 aa12.59□□□□□ -0.39
R3HDM2-210ENST00000547019 GDF15Q99988 308 aa12.59□□□□□ -0.39
R3HDM2-210ENST00000547019 TMEM39BQ9GZU3 492 aa12.59□□□□□ -0.39
R3HDM2-210ENST00000547019 RNF208Q9H0X6 261 aa12.59□□□□□ -0.39
R3HDM2-210ENST00000547019 UNC93B1Q9H1C4 597 aa12.59□□□□□ -0.39
R3HDM2-210ENST00000547019 CWC25Q9NXE8 425 aaPredicted RBP12.59□□□□□ -0.39
R3HDM2-210ENST00000547019 LEMD3Q9Y2U8 911 aa12.59□□□□□ -0.39
R3HDM2-210ENST00000547019 SNCAIPQ9Y6H5 919 aa12.59□□□□□ -0.39
R3HDM2-210ENST00000547019 ZNF521Q96K83 1311 aa12.59□□□□□ -0.39
R3HDM2-210ENST00000547019 IGKV5-2P06315 115 aa12.58□□□□□ -0.4
R3HDM2-210ENST00000547019 PSMC4P43686 418 aa12.58□□□□□ -0.4
R3HDM2-210ENST00000547019 DUSP27Q5VZP5 1158 aa12.58□□□□□ -0.4
R3HDM2-210ENST00000547019 CPA4Q9UI42 421 aa12.58□□□□□ -0.4
R3HDM2-210ENST00000547019 PTPRFP10586 1907 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 SPDYE5A6NIY4 337 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 IRF6O14896 467 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 EVI5O60447 810 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 GNRH1P01148 92 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 HSP90B1P14625 803 aaKnown RBP12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 BCAMP50895 628 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 PRMT2P55345 433 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 PRKCZQ05513 592 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 GOLGA2Q08379 1002 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 KIF22Q14807 665 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 SPDYE2Q495Y8 402 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 GPR153Q6NV75 609 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 DIS3LQ8TF46 1054 aaKnown RBP12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 METTL22Q9BUU2 404 aaPredicted RBP12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 MYH16Q9H6N6 1097 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 TDRD3Q9H7E2 651 aaKnown RBP12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 ZNF70Q9UC06 446 aaPredicted RBP12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 GABRQQ9UN88 632 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 MYPNQ86TC9 1320 aa12.57□□□□□ -0.4
R3HDM2-210ENST00000547019 CDH23Q9H251 3354 aa12.56□□□□□ -0.4
R3HDM2-210ENST00000547019 MYO1BO43795 1136 aa12.56□□□□□ -0.4
R3HDM2-210ENST00000547019 MAP3K9P80192 1104 aa12.56□□□□□ -0.4
R3HDM2-210ENST00000547019 RAET1EQ8TD07 263 aa12.56□□□□□ -0.4
R3HDM2-210ENST00000547019 TCP10L2B9ZVM9 353 aa12.55□□□□□ -0.4
R3HDM2-210ENST00000547019 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
R3HDM2-210ENST00000547019 TAF5LO75529 589 aa12.55□□□□□ -0.4
R3HDM2-210ENST00000547019 SGPL1O95470 568 aa12.55□□□□□ -0.4
R3HDM2-210ENST00000547019 BMP8BP34820 402 aa12.55□□□□□ -0.4
R3HDM2-210ENST00000547019 HNRNPUQ00839 825 aaKnown RBP eCLIP12.55□□□□□ -0.4
R3HDM2-210ENST00000547019 CHRNDQ07001 517 aa12.55□□□□□ -0.4
R3HDM2-210ENST00000547019 ZKSCAN4Q969J2 545 aaPredicted RBP12.55□□□□□ -0.4
R3HDM2-210ENST00000547019 ZCCHC17Q9NP64 241 aaKnown RBP12.55□□□□□ -0.4
R3HDM2-210ENST00000547019 ZMYND8Q9ULU4 1186 aaPredicted RBP12.55□□□□□ -0.4
R3HDM2-210ENST00000547019 CETPP11597 493 aa12.54□□□□□ -0.4
R3HDM2-210ENST00000547019 IL1R1P14778 569 aa12.54□□□□□ -0.4
R3HDM2-210ENST00000547019 ITGA6P23229 1130 aa12.54□□□□□ -0.4
R3HDM2-210ENST00000547019 RBM5P52756 815 aaKnown RBP eCLIP12.54□□□□□ -0.4
R3HDM2-210ENST00000547019 MOGSQ13724 837 aa12.54□□□□□ -0.4
R3HDM2-210ENST00000547019 CWF19L2Q2TBE0 894 aaKnown RBP12.54□□□□□ -0.4
R3HDM2-210ENST00000547019 TWISTNBQ3B726 338 aaPredicted RBP12.54□□□□□ -0.4
R3HDM2-210ENST00000547019 LRIT3Q3SXY7 679 aa12.54□□□□□ -0.4
R3HDM2-210ENST00000547019 C8orf58Q8NAV2 365 aa12.54□□□□□ -0.4
R3HDM2-210ENST00000547019 HELBQ8NG08 1087 aaPredicted RBP12.54□□□□□ -0.4
R3HDM2-210ENST00000547019 GUCD1Q96NT3 240 aa12.54□□□□□ -0.4
R3HDM2-210ENST00000547019 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
R3HDM2-210ENST00000547019 COL2A1P02458 1487 aaPredicted RBP12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 AK9Q5TCS8 1911 aa12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 DNAH12Q6ZR08 3092 aa12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 E9PSI1 815 aa12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 FMNL1O95466 1100 aaPredicted RBP12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 ELNP15502 786 aa12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 SYN1P17600 705 aa12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 IGHMBP2P38935 993 aaKnown RBP12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 CACNB3P54284 484 aa12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 TNFAIP1Q13829 316 aa12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 GRIK5Q16478 980 aa12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 C15orf52Q6ZUT6 534 aaKnown RBP12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 C7orf61Q8IZ16 206 aa12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 TSPYL6Q8N831 410 aa12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 PAWRQ96IZ0 340 aaKnown RBP12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 BIN2Q9UBW5 565 aaPredicted RBP12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 MAP3K2Q9Y2U5 619 aa12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 CSADQ9Y600 493 aa12.53□□□□□ -0.4
R3HDM2-210ENST00000547019 MAGEA10P43363 369 aaPredicted RBP12.52□□□□□ -0.41
R3HDM2-210ENST00000547019 FKBP1AP62942 108 aaKnown RBP12.52□□□□□ -0.41
R3HDM2-210ENST00000547019 EXOSC9Q06265 439 aaKnown RBP12.52□□□□□ -0.41
R3HDM2-210ENST00000547019 SNAPC2Q13487 334 aa12.52□□□□□ -0.41
R3HDM2-210ENST00000547019 CCDC30Q5VVM6 783 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms