RNA–Protein interactions for RNA: ENST00000546962.5

TMEM116-204, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-204ENST00000546962 FAM129BQ96TA1 746 aa4.26□□□□□ -1.73
TMEM116-204ENST00000546962 RNF19AQ9NV58 838 aa4.26□□□□□ -1.73
TMEM116-204ENST00000546962 CABP1Q9NZU7 370 aa4.26□□□□□ -1.73
TMEM116-204ENST00000546962 PKD2L1Q9P0L9 805 aa4.26□□□□□ -1.73
TMEM116-204ENST00000546962 PIM2Q9P1W9 311 aa4.26□□□□□ -1.73
TMEM116-204ENST00000546962 CHMP3Q9Y3E7 222 aa4.26□□□□□ -1.73
TMEM116-204ENST00000546962 PARP3Q9Y6F1 533 aa4.26□□□□□ -1.73
TMEM116-204ENST00000546962 NSD3Q9BZ95 1437 aa4.26□□□□□ -1.73
TMEM116-204ENST00000546962 ANKRD36BQ8N2N9 1353 aa4.26□□□□□ -1.73
TMEM116-204ENST00000546962 RGPD8O14715 1765 aaPredicted RBP4.25□□□□□ -1.73
TMEM116-204ENST00000546962 PPLO60437 1756 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 GLTPD2A6NH11 291 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 HIRAP54198 1017 aaPredicted RBP4.25□□□□□ -1.73
TMEM116-204ENST00000546962 EHHADHQ08426 723 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 FOXC1Q12948 553 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 COL24A1Q17RW2 1714 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 C11orf91Q3C1V1 193 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 DALRD3Q5D0E6 543 aaKnown RBP4.25□□□□□ -1.73
TMEM116-204ENST00000546962 ZNF697Q5TEC3 545 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 ZNF598Q86UK7 904 aaKnown RBP4.25□□□□□ -1.73
TMEM116-204ENST00000546962 PPARGC1BQ86YN6 1023 aaKnown RBP4.25□□□□□ -1.73
TMEM116-204ENST00000546962 ETFBKMTQ8IXQ9 262 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 GCC1Q96CN9 775 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 IFT43Q96FT9 208 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 BACH2Q9BYV9 841 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 PRKD2Q9BZL6 878 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 ZNF395Q9H8N7 513 aaPredicted RBP4.25□□□□□ -1.73
TMEM116-204ENST00000546962 ZFAND3Q9H8U3 227 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 KLK14Q9P0G3 267 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 POLIQ9UNA4 740 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 ZNF232Q9UNY5 417 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 WASF2Q9Y6W5 498 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 NHSQ6T4R5 1651 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 KCPQ6ZWJ8 1503 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 CNTNAP1P78357 1384 aa4.25□□□□□ -1.73
TMEM116-204ENST00000546962 TRPM1Q7Z4N2 1603 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 CICQ96RK0 1608 aaPredicted RBP4.24□□□□□ -1.73
TMEM116-204ENST00000546962 CPSF1Q10570 1443 aaKnown RBP4.24□□□□□ -1.73
TMEM116-204ENST00000546962 J3QL48 77 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 MEN1O00255 615 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 GPR182O15218 404 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 ZIC2O95409 532 aaPredicted RBP4.24□□□□□ -1.73
TMEM116-204ENST00000546962 LDHBP07195 334 aaKnown RBP4.24□□□□□ -1.73
TMEM116-204ENST00000546962 MMP10P09238 476 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 HSPA8P11142 646 aaKnown RBP4.24□□□□□ -1.73
TMEM116-204ENST00000546962 DPEP1P16444 411 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 MAPK8P45983 427 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 VEGFBP49765 207 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 RELBQ01201 579 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 DGKZQ13574 1117 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 MRPL58Q14197 206 aaKnown RBP4.24□□□□□ -1.73
TMEM116-204ENST00000546962 RTN1Q16799 776 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 TSNAXIP1Q2TAA8 658 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 LDLRAD1Q5T700 205 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 NLGN1Q8N2Q7 840 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 NBPF15Q8N660 670 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 SNIP1Q8TAD8 396 aaKnown RBP4.24□□□□□ -1.73
TMEM116-204ENST00000546962 SMARCC1Q92922 1105 aaPredicted RBP4.24□□□□□ -1.73
TMEM116-204ENST00000546962 DMRTB1Q96MA1 342 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 NLRP3Q96P20 1036 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 ZSCAN10Q96SZ4 725 aaPredicted RBP4.24□□□□□ -1.73
TMEM116-204ENST00000546962 SETDB2Q96T68 719 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 PHACTR1Q9C0D0 580 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 NIF3L1Q9GZT8 377 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 ABCC6O95255 1503 aa4.24□□□□□ -1.73
TMEM116-204ENST00000546962 PDGFAP04085 211 aa4.23□□□□□ -1.73
TMEM116-204ENST00000546962 TIMP2P16035 220 aa4.23□□□□□ -1.73
TMEM116-204ENST00000546962 LMNB1P20700 586 aa4.23□□□□□ -1.73
TMEM116-204ENST00000546962 MZF1P28698 734 aaPredicted RBP4.23□□□□□ -1.73
TMEM116-204ENST00000546962 TXLNAP40222 546 aa4.23□□□□□ -1.73
TMEM116-204ENST00000546962 ZAP70P43403 619 aa4.23□□□□□ -1.73
TMEM116-204ENST00000546962 WDR4P57081 412 aaKnown RBP4.23□□□□□ -1.73
TMEM116-204ENST00000546962 DNM1Q05193 864 aaKnown RBP4.23□□□□□ -1.73
TMEM116-204ENST00000546962 ZCRB1Q8TBF4 217 aaKnown RBP4.23□□□□□ -1.73
TMEM116-204ENST00000546962 C7orf43Q8WVR3 580 aa4.23□□□□□ -1.73
TMEM116-204ENST00000546962 EDEM1Q92611 657 aa4.23□□□□□ -1.73
TMEM116-204ENST00000546962 ALKBH8Q96BT7 664 aaKnown RBP4.23□□□□□ -1.73
TMEM116-204ENST00000546962 DCAF5Q96JK2 942 aa4.23□□□□□ -1.73
TMEM116-204ENST00000546962 FAM161BQ96MY7 647 aa4.23□□□□□ -1.73
TMEM116-204ENST00000546962 DUSP9Q99956 384 aaKnown RBP4.23□□□□□ -1.73
TMEM116-204ENST00000546962 NIFKQ9BYG3 293 aaKnown RBP4.23□□□□□ -1.73
TMEM116-204ENST00000546962 GRIP2Q9C0E4 1043 aa4.23□□□□□ -1.73
TMEM116-204ENST00000546962 PARP2Q9UGN5 583 aa4.23□□□□□ -1.73
TMEM116-204ENST00000546962 QSER1Q2KHR3 1735 aa4.23□□□□□ -1.73
TMEM116-204ENST00000546962 SLIT3O75094 1523 aa4.22□□□□□ -1.73
TMEM116-204ENST00000546962 GDF9O60383 454 aa4.22□□□□□ -1.73
TMEM116-204ENST00000546962 PRPF40AO75400 957 aaKnown RBP4.22□□□□□ -1.73
TMEM116-204ENST00000546962 TMF1P82094 1093 aa4.22□□□□□ -1.73
TMEM116-204ENST00000546962 DEFB115Q30KQ5 88 aa4.22□□□□□ -1.73
TMEM116-204ENST00000546962 C1orf53Q5VUE5 145 aa4.22□□□□□ -1.73
TMEM116-204ENST00000546962 TMEM214Q6NUQ4 689 aaKnown RBP4.22□□□□□ -1.73
TMEM116-204ENST00000546962 TREML1Q86YW5 311 aa4.22□□□□□ -1.73
TMEM116-204ENST00000546962 GJD3Q8N144 294 aa4.22□□□□□ -1.73
TMEM116-204ENST00000546962 ANKRD24Q8TF21 1146 aa4.22□□□□□ -1.73
TMEM116-204ENST00000546962 GGNBP2Q9H3C7 697 aa4.22□□□□□ -1.73
TMEM116-204ENST00000546962 AKAP12Q02952 1782 aa4.22□□□□□ -1.73
TMEM116-204ENST00000546962 TTC21AQ8NDW8 1320 aa4.21□□□□□ -1.73
TMEM116-204ENST00000546962 TTC24A2A3L6 582 aaPredicted RBP4.21□□□□□ -1.74
TMEM116-204ENST00000546962 RASSF10A6NK89 507 aa4.21□□□□□ -1.74
TMEM116-204ENST00000546962 CA12O43570 354 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms