RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 CACTINQ8WUQ7 758 aaKnown RBP22.01■■□□□ 1.11
MSLN-202ENST00000545450 HMG20BQ9P0W2 317 aa22.01■■□□□ 1.11
MSLN-202ENST00000545450 CLIP2Q9UDT6 1046 aa22.01■■□□□ 1.11
MSLN-202ENST00000545450 TAF1P21675 1872 aa22.01■■□□□ 1.11
MSLN-202ENST00000545450 ERFEQ4G0M1 354 aa22.01■■□□□ 1.11
MSLN-202ENST00000545450 ARHGEF1Q92888 912 aaKnown RBP22.01■■□□□ 1.11
MSLN-202ENST00000545450 DNAJC25Q9H1X3 360 aa22.01■■□□□ 1.11
MSLN-202ENST00000545450 CTNNA3Q9UI47 895 aa22.01■■□□□ 1.11
MSLN-202ENST00000545450 RFX7Q2KHR2 1363 aa22■■□□□ 1.11
MSLN-202ENST00000545450 UBR3Q6ZT12 1888 aa22■■□□□ 1.11
MSLN-202ENST00000545450 CHGBP05060 677 aa22■■□□□ 1.11
MSLN-202ENST00000545450 IFIT1P09914 478 aaKnown RBP21.99■■□□□ 1.11
MSLN-202ENST00000545450 RESTQ13127 1097 aa21.99■■□□□ 1.11
MSLN-202ENST00000545450 CCDC152Q4G0S7 254 aa21.99■■□□□ 1.11
MSLN-202ENST00000545450 SARM1Q6SZW1 724 aa21.99■■□□□ 1.11
MSLN-202ENST00000545450 BICD2Q8TD16 824 aa21.99■■□□□ 1.11
MSLN-202ENST00000545450 PAG1Q9NWQ8 432 aa21.99■■□□□ 1.11
MSLN-202ENST00000545450 ARAP2Q8WZ64 1704 aa21.99■■□□□ 1.11
MSLN-202ENST00000545450 RTL9Q8NET4 1388 aa21.99■■□□□ 1.11
MSLN-202ENST00000545450 AKAP11Q9UKA4 1901 aa21.99■■□□□ 1.11
MSLN-202ENST00000545450 GOLIM4O00461 696 aa21.99■■□□□ 1.11
MSLN-202ENST00000545450 ZPR1O75312 459 aa21.99■■□□□ 1.11
MSLN-202ENST00000545450 TRIM37O94972 964 aa21.99■■□□□ 1.11
MSLN-202ENST00000545450 CCDC144BQ3MJ40 725 aa21.99■■□□□ 1.11
MSLN-202ENST00000545450 CCDC144CPQ8IYA2 1237 aa21.99■■□□□ 1.11
MSLN-202ENST00000545450 HSP90B1P14625 803 aaKnown RBP21.98■■□□□ 1.11
MSLN-202ENST00000545450 KBTBD3Q8NAB2 608 aa21.98■■□□□ 1.11
MSLN-202ENST00000545450 CCDC112Q8NEF3 446 aa21.98■■□□□ 1.11
MSLN-202ENST00000545450 PDE8BO95263 885 aa21.98■■□□□ 1.11
MSLN-202ENST00000545450 IQCB1Q15051 598 aa21.98■■□□□ 1.11
MSLN-202ENST00000545450 C3orf67Q6ZVT6 689 aa21.98■■□□□ 1.11
MSLN-202ENST00000545450 ZNF589Q86UQ0 364 aaPredicted RBP21.98■■□□□ 1.11
MSLN-202ENST00000545450 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.98■■□□□ 1.11
MSLN-202ENST00000545450 CGNQ9P2M7 1197 aaKnown RBP21.98■■□□□ 1.11
MSLN-202ENST00000545450 ABCC12Q96J65 1359 aa21.98■■□□□ 1.11
MSLN-202ENST00000545450 STK3Q13188 491 aa21.97■■□□□ 1.11
MSLN-202ENST00000545450 TPD52L1Q16890 204 aaPredicted RBP21.97■■□□□ 1.11
MSLN-202ENST00000545450 CCDC158Q5M9N0 1113 aa21.97■■□□□ 1.11
MSLN-202ENST00000545450 TTC39AQ5SRH9 613 aa21.97■■□□□ 1.11
MSLN-202ENST00000545450 GORABQ5T7V8 394 aa21.97■■□□□ 1.11
MSLN-202ENST00000545450 GTF3C6Q969F1 213 aa21.97■■□□□ 1.11
MSLN-202ENST00000545450 RBM6P78332 1123 aaKnown RBP21.97■■□□□ 1.11
MSLN-202ENST00000545450 MROH5Q6ZUA9 1318 aa21.96■■□□□ 1.11
MSLN-202ENST00000545450 TAF5LO75529 589 aa21.96■■□□□ 1.11
MSLN-202ENST00000545450 SCARF1Q14162 830 aa21.96■■□□□ 1.11
MSLN-202ENST00000545450 ZNF772Q68DY9 489 aaPredicted RBP21.96■■□□□ 1.11
MSLN-202ENST00000545450 LRRC8AQ8IWT6 810 aa21.96■■□□□ 1.11
MSLN-202ENST00000545450 HELBQ8NG08 1087 aaPredicted RBP21.96■■□□□ 1.11
MSLN-202ENST00000545450 MRFAP1L1Q96HT8 127 aa21.96■■□□□ 1.11
MSLN-202ENST00000545450 ZSCAN16Q9H4T2 348 aaPredicted RBP21.96■■□□□ 1.11
MSLN-202ENST00000545450 A0A1B0GUL6 1792 aa21.96■■□□□ 1.11
MSLN-202ENST00000545450 NEMFO60524 1076 aa21.95■■□□□ 1.1
MSLN-202ENST00000545450 JAK2O60674 1132 aa21.95■■□□□ 1.1
MSLN-202ENST00000545450 KRT32Q14532 448 aa21.95■■□□□ 1.1
MSLN-202ENST00000545450 SETDB2Q96T68 719 aa21.95■■□□□ 1.1
MSLN-202ENST00000545450 MPHOSPH8Q99549 860 aa21.95■■□□□ 1.1
MSLN-202ENST00000545450 CFAP45Q9UL16 551 aa21.95■■□□□ 1.1
MSLN-202ENST00000545450 TRAPPC3LQ5T215 181 aa21.95■■□□□ 1.1
MSLN-202ENST00000545450 BRF1Q92994 677 aa21.95■■□□□ 1.1
MSLN-202ENST00000545450 DDX41Q9UJV9 622 aaKnown RBP21.95■■□□□ 1.1
MSLN-202ENST00000545450 MYH7P12883 1935 aa21.94■■□□□ 1.1
MSLN-202ENST00000545450 CEP135Q66GS9 1140 aa21.94■■□□□ 1.1
MSLN-202ENST00000545450 SEC62Q99442 399 aaKnown RBP21.94■■□□□ 1.1
MSLN-202ENST00000545450 FGFR2P21802 821 aa21.94■■□□□ 1.1
MSLN-202ENST00000545450 RFC4P35249 363 aa21.94■■□□□ 1.1
MSLN-202ENST00000545450 SLFNL1Q499Z3 407 aa21.94■■□□□ 1.1
MSLN-202ENST00000545450 MYO5AQ9Y4I1 1855 aaKnown RBP21.93■■□□□ 1.1
MSLN-202ENST00000545450 GOLGA6L19H0YKK7 550 aa21.93■■□□□ 1.1
MSLN-202ENST00000545450 FKBP4Q02790 459 aaKnown RBP eCLIP21.93■■□□□ 1.1
MSLN-202ENST00000545450 NAA30Q147X3 362 aaPredicted RBP21.93■■□□□ 1.1
MSLN-202ENST00000545450 SF3B3Q15393 1217 aaKnown RBP21.93■■□□□ 1.1
MSLN-202ENST00000545450 CTAGE5O15320 804 aa21.92■■□□□ 1.1
MSLN-202ENST00000545450 GTF2E1P29083 439 aaPredicted RBP21.92■■□□□ 1.1
MSLN-202ENST00000545450 IGHMBP2P38935 993 aaKnown RBP21.92■■□□□ 1.1
MSLN-202ENST00000545450 PUM3Q15397 648 aaKnown RBP21.92■■□□□ 1.1
MSLN-202ENST00000545450 SLC10A5Q5PT55 438 aa21.92■■□□□ 1.1
MSLN-202ENST00000545450 PI16Q6UXB8 463 aa21.92■■□□□ 1.1
MSLN-202ENST00000545450 NBPF5PQ86XG9 351 aaPredicted RBP21.92■■□□□ 1.1
MSLN-202ENST00000545450 NEK1Q96PY6 1258 aa21.92■■□□□ 1.1
MSLN-202ENST00000545450 NYXQ9GZU5 481 aa21.92■■□□□ 1.1
MSLN-202ENST00000545450 SNAP23O00161 211 aa21.92■■□□□ 1.1
MSLN-202ENST00000545450 CCDC129Q6ZRS4 1044 aa21.92■■□□□ 1.1
MSLN-202ENST00000545450 NYAP1Q6ZVC0 841 aa21.92■■□□□ 1.1
MSLN-202ENST00000545450 MORC2Q9Y6X9 1032 aaPredicted RBP21.92■■□□□ 1.1
MSLN-202ENST00000545450 ADD1P35611 737 aaKnown RBP21.91■■□□□ 1.1
MSLN-202ENST00000545450 SLC27A3Q5K4L6 730 aa21.91■■□□□ 1.1
MSLN-202ENST00000545450 C11orf57Q6ZUT1 292 aaPredicted RBP21.91■■□□□ 1.1
MSLN-202ENST00000545450 H3BQV1 296 aa21.91■■□□□ 1.1
MSLN-202ENST00000545450 MCAMP43121 646 aa21.91■■□□□ 1.1
MSLN-202ENST00000545450 ZAP70P43403 619 aa21.91■■□□□ 1.1
MSLN-202ENST00000545450 GABPB1Q06547 395 aaPredicted RBP21.91■■□□□ 1.1
MSLN-202ENST00000545450 STX1AQ16623 288 aa21.91■■□□□ 1.1
MSLN-202ENST00000545450 IFFO2Q5TF58 517 aa21.91■■□□□ 1.1
MSLN-202ENST00000545450 LPIN2Q92539 896 aa21.91■■□□□ 1.1
MSLN-202ENST00000545450 DDX11Q96FC9 970 aa21.91■■□□□ 1.1
MSLN-202ENST00000545450 RCOR1Q9UKL0 485 aa21.91■■□□□ 1.1
MSLN-202ENST00000545450 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.9■■□□□ 1.1
MSLN-202ENST00000545450 MCMDC2Q4G0Z9 681 aa21.9■■□□□ 1.1
MSLN-202ENST00000545450 CCDC24Q8N4L8 307 aa21.9■■□□□ 1.1
MSLN-202ENST00000545450 SMARCC2Q8TAQ2 1214 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms