RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 FAM227BQ96M60 508 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 CCDC85AQ96PX6 553 aaPredicted RBP6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 SETDB2Q96T68 719 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 MPHOSPH8Q99549 860 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 SLKQ9H2G2 1235 aaPredicted RBP6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 CHMP5Q9NZZ3 219 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 HMG20BQ9P0W2 317 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 SEPT9Q9UHD8 586 aaPredicted RBP6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 AKAP11Q9UKA4 1901 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 RPAP1Q9BWH6 1393 aaPredicted RBP6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 FAM177BA6PVY3 158 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 GOLIM4O00461 696 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 HSP90AA1P07900 732 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 UQCRFS1P1P0C7P4 283 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 ZKSCAN1P17029 563 aaPredicted RBP6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 ADORA1P30542 326 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 RFC4P35249 363 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 DDIT3P35638 169 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 KCNQ4P56696 695 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 TTF1Q15361 905 aaPredicted RBP6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 ERFEQ4G0M1 354 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 MCMDC2Q4G0Z9 681 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 ZMYM1Q5SVZ6 1142 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 TRAPPC3LQ5T215 181 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 RNF20Q5VTR2 975 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 PADI6Q6TGC4 694 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 DDX46Q7L014 1031 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 NBPF5PQ86XG9 351 aaPredicted RBP6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 ANKRD18AQ8IVF6 992 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 MAP4K1Q92918 833 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 EDC3Q96F86 508 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 LRCH3Q96II8 777 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 TM6SF1Q9BZW5 370 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 HELLSQ9NRZ9 838 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 SRP68Q9UHB9 627 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 PNMA3Q9UL41 463 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 PALD1Q9ULE6 856 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 RBM8AQ9Y5S9 174 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 SNX14Q9Y5W7 946 aa6.55□□□□□ -1.36
NPIPB3-214ENST00000545358 DUOX1Q9NRD9 1551 aa6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 RNF113AO15541 343 aaKnown RBP6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 GTF2E1P29083 439 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 KCNJ4P48050 445 aa6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 NEK4P51957 841 aa6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 PTPN5P54829 565 aa6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 PTH1RQ03431 593 aa6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 ZSCAN25Q6NSZ9 544 aa6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 TPTE2Q6XPS3 522 aa6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 ZNF589Q86UQ0 364 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 DSCC1Q9BVC3 393 aa6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 CWC22Q9HCG8 908 aaKnown RBP6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 SEC31BQ9NQW1 1179 aa6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 LRRC4BQ9NT99 713 aa6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 BSDC1Q9NW68 430 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 COL4A1P02462 1669 aa6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 MAST2Q6P0Q8 1798 aa6.54□□□□□ -1.36
NPIPB3-214ENST00000545358 QSER1Q2KHR3 1735 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 NRXN2Q9P2S2 1712 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 MAST3O60307 1309 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 LAMA4Q16363 1823 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 SLC27A2O14975 620 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 PLSCR1O15162 318 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 TAF5LO75529 589 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 TRIM37O94972 964 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 PSMA5P28066 241 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 MCAMP43121 646 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 CHRNDQ07001 517 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 CUL4AQ13619 759 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 KRT32Q14532 448 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 NECTIN1Q15223 517 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 NFKBIBQ15653 356 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 TSGA10IPQ3SY00 556 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 CREB3L3Q68CJ9 461 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 CCDC102BQ68D86 513 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 PRPF40BQ6NWY9 871 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 BICDL1Q6ZP65 573 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 NUDT18Q6ZVK8 323 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 AMIGO3Q86WK7 504 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 RBM46Q8TBY0 533 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 APPBP2Q92624 585 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 TTC14Q96N46 770 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 NLRP3Q96P20 1036 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 FAM198AQ9UFP1 575 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 NDUFB9Q9Y6M9 179 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 LRRC37AA6NMS7 1700 aa6.53□□□□□ -1.36
NPIPB3-214ENST00000545358 ZNF804BA4D1E1 1349 aa6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 CASTP20810 708 aaKnown RBP6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 RXRBP28702 533 aa6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 ZAP70P43403 619 aa6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 PHKA1P46020 1223 aa6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 ST5P78524 1137 aa6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 FKBP4Q02790 459 aaKnown RBP eCLIP6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 UBE4AQ14139 1066 aa6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 SCARF1Q14162 830 aa6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 NFIXQ14938 502 aa6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 RAB3GAP1Q15042 981 aa6.52□□□□□ -1.37
NPIPB3-214ENST00000545358 TXNRD1Q16881 649 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms