RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 EPB41L2O43491 1005 aaKnown RBP8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 ZFYP08048 801 aaPredicted RBP8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 CHAF1AQ13111 956 aaPredicted RBP8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 GSE1Q14687 1217 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 AOC3Q16853 763 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 DOK7Q18PE1 504 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 MCMDC2Q4G0Z9 681 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 DALRD3Q5D0E6 543 aaKnown RBP8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 VPS37DQ86XT2 251 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 UBE2Q2Q8WVN8 375 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 DBNDD1Q9H9R9 158 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 ANO2Q9NQ90 1003 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 ADAMTSL1Q8N6G6 1762 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 REC8O95072 547 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 PTMSP20962 102 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 HSPA4P34932 840 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 MECOMQ03112 1051 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 RASEFQ8IZ41 740 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 RTKN2Q8IZC4 609 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 MAGEB6Q8N7X4 407 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 RIOK1Q9BRS2 568 aaKnown RBP8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 MXD3Q9BW11 206 aa8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 ZNF277Q9NRM2 450 aaPredicted RBP8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 PPP1R1BQ9UD71 204 aaPredicted RBP8.41□□□□□ -1.06
HMGCS2-204ENST00000544913 LTBP3Q9NS15 1303 aa8.4□□□□□ -1.06
HMGCS2-204ENST00000544913 ECE2O60344 883 aa8.4□□□□□ -1.06
HMGCS2-204ENST00000544913 NECTIN1Q15223 517 aa8.4□□□□□ -1.06
HMGCS2-204ENST00000544913 GRIPAP1Q4V328 841 aa8.4□□□□□ -1.06
HMGCS2-204ENST00000544913 DACT2Q5SW24 774 aa8.4□□□□□ -1.06
HMGCS2-204ENST00000544913 STRBPQ96SI9 672 aaKnown RBP8.4□□□□□ -1.06
HMGCS2-204ENST00000544913 EYA3Q99504 573 aa8.4□□□□□ -1.06
HMGCS2-204ENST00000544913 ZC3H12CQ9C0D7 883 aaKnown RBP8.4□□□□□ -1.06
HMGCS2-204ENST00000544913 EPB41L4AQ9HCS5 686 aaPredicted RBP8.4□□□□□ -1.06
HMGCS2-204ENST00000544913 ABCF2Q9UG63 623 aa8.4□□□□□ -1.06
HMGCS2-204ENST00000544913 GPAA1O43292 621 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 HSPD1P10809 573 aaKnown RBP8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 GTF2IP78347 998 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 MAP3K12Q12852 859 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 DIXDC1Q155Q3 683 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 PODNQ7Z5L7 613 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 KLHL34Q8N239 644 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 LCORLQ8N3X6 602 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 WDR66Q8TBY9 1149 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 RUFY2Q8WXA3 655 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 SYT17Q9BSW7 474 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 NBPF3Q9H094 633 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 DDX60LQ5H9U9 1706 aaKnown RBP8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 CCDC88AQ3V6T2 1871 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 GAKO14976 1311 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 PPIP5K2O43314 1243 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 MBD4O95243 580 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 RABEP1Q15276 862 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 MFSD14BQ5SR56 506 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 SOGA3Q5TF21 947 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 GMLQ99445 158 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 RAI14Q9P0K7 980 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 LRP2BPQ9P2M1 347 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 BCS1LQ9Y276 419 aa8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 RBM8AQ9Y5S9 174 aaKnown RBP8.39□□□□□ -1.07
HMGCS2-204ENST00000544913 RPAP1Q9BWH6 1393 aaPredicted RBP8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 CDK5RAP2Q96SN8 1893 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 LAMA4Q16363 1823 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 MYH2Q9UKX2 1941 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 PRKAB2O43741 272 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 FRAT2O75474 233 aaPredicted RBP8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 CD2BP2O95400 341 aaKnown RBP8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 YBX3P16989 372 aaKnown RBP eCLIP8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 CYP7A1P22680 504 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 RASSF7Q02833 373 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 TTLL5Q6EMB2 1281 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 ZSCAN25Q6NSZ9 544 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 MIGA1Q8NAN2 632 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 SUPT20HQ8NEM7 779 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 NKX2-3Q8TAU0 364 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 DSCC1Q9BVC3 393 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 TAOK3Q9H2K8 898 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 ARMT1Q9H993 441 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 SNX14Q9Y5W7 946 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 TACC3Q9Y6A5 838 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 TIAM2Q8IVF5 1701 aa8.38□□□□□ -1.07
HMGCS2-204ENST00000544913 SBF1O95248 1867 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 GSG1L2A8MUP6 293 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 SMIM22K7EJ46 135 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 SLC27A2O14975 620 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 IGSF3O75054 1194 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 LDHBP07195 334 aaKnown RBP8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 CYP21A2P08686 494 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 IARSP41252 1262 aaKnown RBP8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 FKBP1AP62942 108 aaKnown RBP8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 DYNLL1P63167 89 aaKnown RBP8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 STRIP1Q5VSL9 837 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 CREB3L3Q68CJ9 461 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 NAA16Q6N069 864 aaPredicted RBP8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 STOX1Q6ZVD7 989 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 FAM163AQ96GL9 167 aaPredicted RBP8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 VPS33BQ9H267 617 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 SLKQ9H2G2 1235 aaPredicted RBP8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 MKRN1Q9UHC7 482 aaKnown RBP8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 K7ELQ4 463 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms