RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 EYA2O00167 538 aa11.74□□□□□ -0.53
CIT-216ENST00000544872 RLBP1P12271 317 aa11.74□□□□□ -0.53
CIT-216ENST00000544872 BCAMP50895 628 aa11.74□□□□□ -0.53
CIT-216ENST00000544872 ATP8B2P98198 1209 aa11.74□□□□□ -0.53
CIT-216ENST00000544872 MTX1Q13505 466 aa11.74□□□□□ -0.53
CIT-216ENST00000544872 UBE4AQ14139 1066 aa11.74□□□□□ -0.53
CIT-216ENST00000544872 ZNF804AQ7Z570 1209 aa11.74□□□□□ -0.53
CIT-216ENST00000544872 ERC1Q8IUD2 1116 aa11.74□□□□□ -0.53
CIT-216ENST00000544872 KAZALD1Q96I82 304 aa11.74□□□□□ -0.53
CIT-216ENST00000544872 ZNF594Q96JF6 807 aaPredicted RBP11.74□□□□□ -0.53
CIT-216ENST00000544872 FAM161BQ96MY7 647 aa11.74□□□□□ -0.53
CIT-216ENST00000544872 GNL3LQ9NVN8 582 aaKnown RBP11.74□□□□□ -0.53
CIT-216ENST00000544872 PTCH2Q9Y6C5 1203 aa11.74□□□□□ -0.53
CIT-216ENST00000544872 SPTBN5Q9NRC6 3674 aaKnown RBP11.74□□□□□ -0.53
CIT-216ENST00000544872 ZNF609O15014 1411 aa11.73□□□□□ -0.53
CIT-216ENST00000544872 SURF6O75683 361 aaKnown RBP11.73□□□□□ -0.53
CIT-216ENST00000544872 SLC5A1P13866 664 aa11.73□□□□□ -0.53
CIT-216ENST00000544872 GORABQ5T7V8 394 aa11.73□□□□□ -0.53
CIT-216ENST00000544872 PODNQ7Z5L7 613 aa11.73□□□□□ -0.53
CIT-216ENST00000544872 SYNGAP1Q96PV0 1343 aa11.73□□□□□ -0.53
CIT-216ENST00000544872 COA1Q9GZY4 146 aa11.73□□□□□ -0.53
CIT-216ENST00000544872 SIL1Q9H173 461 aa11.73□□□□□ -0.53
CIT-216ENST00000544872 COPRSQ9NQ92 184 aa11.73□□□□□ -0.53
CIT-216ENST00000544872 TNNQ9UQP3 1299 aa11.73□□□□□ -0.53
CIT-216ENST00000544872 SUPT16HQ9Y5B9 1047 aaKnown RBP11.73□□□□□ -0.53
CIT-216ENST00000544872 SNED1Q8TER0 1413 aa11.72□□□□□ -0.53
CIT-216ENST00000544872 ECM2O94769 699 aaPredicted RBP11.72□□□□□ -0.53
CIT-216ENST00000544872 PDE8BO95263 885 aa11.72□□□□□ -0.53
CIT-216ENST00000544872 PTPN12Q05209 780 aaKnown RBP11.72□□□□□ -0.53
CIT-216ENST00000544872 ARHGEF6Q15052 776 aa11.72□□□□□ -0.53
CIT-216ENST00000544872 PUM3Q15397 648 aaKnown RBP11.72□□□□□ -0.53
CIT-216ENST00000544872 LRIT3Q3SXY7 679 aa11.72□□□□□ -0.53
CIT-216ENST00000544872 HELBQ8NG08 1087 aaPredicted RBP11.72□□□□□ -0.53
CIT-216ENST00000544872 MAFAQ8NHW3 353 aaPredicted RBP11.72□□□□□ -0.53
CIT-216ENST00000544872 SH3TC2Q8TF17 1288 aa11.72□□□□□ -0.53
CIT-216ENST00000544872 ZBTB40Q9NUA8 1239 aa11.72□□□□□ -0.53
CIT-216ENST00000544872 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.72□□□□□ -0.53
CIT-216ENST00000544872 POLLQ9UGP5 575 aa11.72□□□□□ -0.53
CIT-216ENST00000544872 HCN4Q9Y3Q4 1203 aa11.72□□□□□ -0.53
CIT-216ENST00000544872 RIPOR2Q9Y4F9 1068 aa11.72□□□□□ -0.53
CIT-216ENST00000544872 CACNA1FO60840 1977 aa11.72□□□□□ -0.53
CIT-216ENST00000544872 TAF5LO75529 589 aa11.71□□□□□ -0.53
CIT-216ENST00000544872 EGFRP00533 1210 aa11.71□□□□□ -0.53
CIT-216ENST00000544872 NEFLP07196 543 aa11.71□□□□□ -0.53
CIT-216ENST00000544872 SP3Q02447 781 aa11.71□□□□□ -0.53
CIT-216ENST00000544872 ALYREFQ86V81 257 aaKnown RBP11.71□□□□□ -0.53
CIT-216ENST00000544872 NKX2-3Q8TAU0 364 aa11.71□□□□□ -0.53
CIT-216ENST00000544872 LPIN2Q92539 896 aa11.71□□□□□ -0.53
CIT-216ENST00000544872 FBXW7Q969H0 707 aa11.71□□□□□ -0.53
CIT-216ENST00000544872 C1orf115Q9H7X2 142 aa11.71□□□□□ -0.53
CIT-216ENST00000544872 ECE2O60344 883 aa11.7□□□□□ -0.54
CIT-216ENST00000544872 HIBADHP31937 336 aaKnown RBP11.7□□□□□ -0.54
CIT-216ENST00000544872 DOK7Q18PE1 504 aa11.7□□□□□ -0.54
CIT-216ENST00000544872 KIF4BQ2VIQ3 1234 aa11.7□□□□□ -0.54
CIT-216ENST00000544872 OGFOD1Q8N543 542 aa11.7□□□□□ -0.54
CIT-216ENST00000544872 KLHDC4Q8TBB5 520 aa11.7□□□□□ -0.54
CIT-216ENST00000544872 SSH3Q8TE77 659 aa11.7□□□□□ -0.54
CIT-216ENST00000544872 GUCD1Q96NT3 240 aa11.7□□□□□ -0.54
CIT-216ENST00000544872 MED23Q9ULK4 1368 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 USP17L3A6NCW0 530 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 USP17L4A6NCW7 530 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 RAB11FIP3O75154 756 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 MMP14P50281 582 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 ATP2B3Q16720 1220 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 LRRC24Q50LG9 513 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 C20orf194Q5TEA3 1177 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 CEP85Q6P2H3 762 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 USP17L1Q7RTZ2 530 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 IFNL1Q8IU54 200 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 DPF2Q92785 391 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 SHISA4Q96DD7 197 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 NEUROD6Q96NK8 337 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 PUS3Q9BZE2 481 aaKnown RBP11.69□□□□□ -0.54
CIT-216ENST00000544872 DBNDD1Q9H9R9 158 aa11.69□□□□□ -0.54
CIT-216ENST00000544872 RPS12P25398 132 aaKnown RBP11.68□□□□□ -0.54
CIT-216ENST00000544872 BMP8BP34820 402 aa11.68□□□□□ -0.54
CIT-216ENST00000544872 RFX5P48382 616 aaPredicted RBP11.68□□□□□ -0.54
CIT-216ENST00000544872 TJAP1Q5JTD0 557 aa11.68□□□□□ -0.54
CIT-216ENST00000544872 C15orf52Q6ZUT6 534 aaKnown RBP11.68□□□□□ -0.54
CIT-216ENST00000544872 TDHQ8IZJ6 230 aa11.68□□□□□ -0.54
CIT-216ENST00000544872 CLASRPQ8N2M8 674 aaKnown RBP11.68□□□□□ -0.54
CIT-216ENST00000544872 PA2G4Q9UQ80 394 aaKnown RBP11.68□□□□□ -0.54
CIT-216ENST00000544872 ANKRD36CQ5JPF3 1778 aa11.68□□□□□ -0.54
CIT-216ENST00000544872 MYO3BQ8WXR4 1341 aa11.67□□□□□ -0.54
CIT-216ENST00000544872 PNMA6EA0A0J9YXQ4 647 aa11.67□□□□□ -0.54
CIT-216ENST00000544872 MANSC4A6NHS7 340 aaPredicted RBP11.67□□□□□ -0.54
CIT-216ENST00000544872 FARP2O94887 1054 aaPredicted RBP11.67□□□□□ -0.54
CIT-216ENST00000544872 INHBEP58166 350 aa11.67□□□□□ -0.54
CIT-216ENST00000544872 POLA2Q14181 598 aa11.67□□□□□ -0.54
CIT-216ENST00000544872 CCDC158Q5M9N0 1113 aa11.67□□□□□ -0.54
CIT-216ENST00000544872 TTLL5Q6EMB2 1281 aa11.67□□□□□ -0.54
CIT-216ENST00000544872 SLC51AQ86UW1 340 aa11.67□□□□□ -0.54
CIT-216ENST00000544872 RWDD1Q9H446 243 aaPredicted RBP11.67□□□□□ -0.54
CIT-216ENST00000544872 ASTN2O75129 1339 aaPredicted RBP11.66□□□□□ -0.54
CIT-216ENST00000544872 SASH1O94885 1247 aa11.66□□□□□ -0.54
CIT-216ENST00000544872 NF2P35240 595 aa11.66□□□□□ -0.54
CIT-216ENST00000544872 TFCP2Q12800 502 aa11.66□□□□□ -0.54
CIT-216ENST00000544872 CRHR2Q13324 411 aa11.66□□□□□ -0.54
CIT-216ENST00000544872 STRIP1Q5VSL9 837 aa11.66□□□□□ -0.54
CIT-216ENST00000544872 ANGEL2Q5VTE6 544 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms