RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 FAM237AA0A1B0GTK4 181 aa15.92■□□□□ 0.14
VPS33A-208ENST00000543633 A0A1B0GVL5 298 aa15.92■□□□□ 0.14
VPS33A-208ENST00000543633 PRC1O43663 620 aa15.92■□□□□ 0.14
VPS33A-208ENST00000543633 SFPQP23246 707 aaKnown RBP eCLIP15.92■□□□□ 0.14
VPS33A-208ENST00000543633 DPCR1Q3MIW9 517 aa15.92■□□□□ 0.14
VPS33A-208ENST00000543633 CCDC158Q5M9N0 1113 aa15.92■□□□□ 0.14
VPS33A-208ENST00000543633 ANO1Q5XXA6 986 aa15.92■□□□□ 0.14
VPS33A-208ENST00000543633 SYNE3Q6ZMZ3 975 aa15.92■□□□□ 0.14
VPS33A-208ENST00000543633 AEBP2Q6ZN18 517 aaPredicted RBP15.92■□□□□ 0.14
VPS33A-208ENST00000543633 KRT222Q8N1A0 295 aa15.92■□□□□ 0.14
VPS33A-208ENST00000543633 NCOA7Q8NI08 942 aa15.92■□□□□ 0.14
VPS33A-208ENST00000543633 CEP126Q9P2H0 1117 aa15.92■□□□□ 0.14
VPS33A-208ENST00000543633 GOLGA8BA8MQT2 603 aa15.91■□□□□ 0.14
VPS33A-208ENST00000543633 NBPF26B4DH59 902 aa15.91■□□□□ 0.14
VPS33A-208ENST00000543633 KIF23Q02241 960 aaPredicted RBP15.91■□□□□ 0.14
VPS33A-208ENST00000543633 NBPF14Q5TI25 921 aa15.91■□□□□ 0.14
VPS33A-208ENST00000543633 NBPF10Q6P3W6 841 aaKnown RBP15.91■□□□□ 0.14
VPS33A-208ENST00000543633 NBPF15Q8N660 670 aa15.91■□□□□ 0.14
VPS33A-208ENST00000543633 XPO4Q9C0E2 1151 aaKnown RBP15.91■□□□□ 0.14
VPS33A-208ENST00000543633 HPS5Q9UPZ3 1129 aa15.91■□□□□ 0.14
VPS33A-208ENST00000543633 CLIC4Q9Y696 253 aa15.91■□□□□ 0.14
VPS33A-208ENST00000543633 KLF18A0A0U1RQI7 1052 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 CBFA2T2O43439 604 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 ZNF202O95125 648 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 AXDND1Q5T1B0 1012 aaPredicted RBP15.9■□□□□ 0.14
VPS33A-208ENST00000543633 TAF3Q5VWG9 929 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 JMYQ8N9B5 988 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 TUBE1Q9UJT0 475 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 MAP3K15Q6ZN16 1313 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 WDR17Q8IZU2 1322 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 TNS2Q63HR2 1409 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 FOXP2O15409 715 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 PPP6R2O75170 966 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 CDKL5O76039 1030 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 PIP4K2AP48426 406 aaPredicted RBP15.9■□□□□ 0.14
VPS33A-208ENST00000543633 NCAPHQ15003 741 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 LRRC24Q50LG9 513 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 E4F1Q66K89 784 aaPredicted RBP15.9■□□□□ 0.14
VPS33A-208ENST00000543633 RALYLQ86SE5 291 aaKnown RBP15.9■□□□□ 0.14
VPS33A-208ENST00000543633 FCHSD1Q86WN1 690 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 PPP1R13BQ96KQ4 1090 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 IFNKQ9P0W0 207 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 ZMYM6O95789 1325 aa15.9■□□□□ 0.14
VPS33A-208ENST00000543633 PHLPP2Q6ZVD8 1323 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 A0A0G2JLW4 131 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 CPLX1O14810 134 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 SMC2O95347 1197 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 CSB-PGBD3P0DP91 1061 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 SLC39A14Q15043 492 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 TTC39AQ5SRH9 613 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 TTLL5Q6EMB2 1281 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 ARMCX5Q6P1M9 558 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 TMC6Q7Z403 805 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 ZHX1Q9UKY1 873 aaPredicted RBP15.89■□□□□ 0.13
VPS33A-208ENST00000543633 PCDH11XQ9BZA7 1347 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 PCDH11YQ9BZA8 1340 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 ERVV-2B6SEH9 535 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 PFKFB1P16118 471 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 KMT5BQ4FZB7 885 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 ELOA2Q8IYF1 753 aaPredicted RBP15.89■□□□□ 0.13
VPS33A-208ENST00000543633 PLA2G12BQ9BX93 195 aa15.89■□□□□ 0.13
VPS33A-208ENST00000543633 TRMT1Q9NXH9 659 aaKnown RBP15.89■□□□□ 0.13
VPS33A-208ENST00000543633 ANTXR2P58335 489 aa15.88■□□□□ 0.13
VPS33A-208ENST00000543633 PIP4K2BP78356 416 aa15.88■□□□□ 0.13
VPS33A-208ENST00000543633 NAA30Q147X3 362 aaPredicted RBP15.88■□□□□ 0.13
VPS33A-208ENST00000543633 CCDC93Q567U6 631 aa15.88■□□□□ 0.13
VPS33A-208ENST00000543633 HPSEQ9Y251 543 aa15.88■□□□□ 0.13
VPS33A-208ENST00000543633 FGAP02671 866 aa15.87■□□□□ 0.13
VPS33A-208ENST00000543633 TRIM28Q13263 835 aaKnown RBP15.87■□□□□ 0.13
VPS33A-208ENST00000543633 TTLL7Q6ZT98 887 aa15.87■□□□□ 0.13
VPS33A-208ENST00000543633 CHST3Q7LGC8 479 aa15.87■□□□□ 0.13
VPS33A-208ENST00000543633 ISCA1Q9BUE6 129 aa15.87■□□□□ 0.13
VPS33A-208ENST00000543633 SRRTQ9BXP5 876 aaKnown RBP15.87■□□□□ 0.13
VPS33A-208ENST00000543633 AKAP11Q9UKA4 1901 aa15.87■□□□□ 0.13
VPS33A-208ENST00000543633 H2AFXP16104 143 aaPredicted RBP15.87■□□□□ 0.13
VPS33A-208ENST00000543633 FANCCQ00597 558 aa15.87■□□□□ 0.13
VPS33A-208ENST00000543633 ELF2Q15723 593 aa15.87■□□□□ 0.13
VPS33A-208ENST00000543633 CPLX2Q6PUV4 134 aaKnown RBP15.87■□□□□ 0.13
VPS33A-208ENST00000543633 ZNF512BQ96KM6 892 aaPredicted RBP15.87■□□□□ 0.13
VPS33A-208ENST00000543633 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.87■□□□□ 0.13
VPS33A-208ENST00000543633 MROH7-TTC4A0A0A0MT08 1334 aa15.86■□□□□ 0.13
VPS33A-208ENST00000543633 A0A087WWV3 80 aa15.86■□□□□ 0.13
VPS33A-208ENST00000543633 UBAP1LF5GYI3 381 aa15.86■□□□□ 0.13
VPS33A-208ENST00000543633 ZNF213O14771 459 aa15.86■□□□□ 0.13
VPS33A-208ENST00000543633 MYL5Q02045 173 aa15.86■□□□□ 0.13
VPS33A-208ENST00000543633 WASHC4Q2M389 1173 aa15.86■□□□□ 0.13
VPS33A-208ENST00000543633 CCDC57Q2TAC2 916 aa15.86■□□□□ 0.13
VPS33A-208ENST00000543633 GORABQ5T7V8 394 aa15.86■□□□□ 0.13
VPS33A-208ENST00000543633 FBXO38Q6PIJ6 1188 aa15.86■□□□□ 0.13
VPS33A-208ENST00000543633 XAGE2Q96GT9 111 aa15.86■□□□□ 0.13
VPS33A-208ENST00000543633 CCDC9Q9Y3X0 531 aaKnown RBP15.86■□□□□ 0.13
VPS33A-208ENST00000543633 TIAM2Q8IVF5 1701 aa15.86■□□□□ 0.13
VPS33A-208ENST00000543633 COL14A1Q05707 1796 aaKnown RBP15.86■□□□□ 0.13
VPS33A-208ENST00000543633 ARAP2Q8WZ64 1704 aa15.86■□□□□ 0.13
VPS33A-208ENST00000543633 SHANK3Q9BYB0 1731 aa15.86■□□□□ 0.13
VPS33A-208ENST00000543633 KIF28PB7ZC32 967 aa15.85■□□□□ 0.13
VPS33A-208ENST00000543633 POLR3DP05423 398 aaPredicted RBP15.85■□□□□ 0.13
VPS33A-208ENST00000543633 SYKP43405 635 aa15.85■□□□□ 0.13
VPS33A-208ENST00000543633 ANGEL1Q9UNK9 670 aaKnown RBP15.85■□□□□ 0.13
VPS33A-208ENST00000543633 RIC1Q4ADV7 1423 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms